-
1
-
-
0024502117
-
Early and late periodic patterns of even skipped expression are controlled by distinct regulatory elements that respond to different spatial cues
-
10.1016/0092-8674(89)90916-1 2720776
-
Early and late periodic patterns of even skipped expression are controlled by distinct regulatory elements that respond to different spatial cues. Goto T, Macdonald P, Maniatis T, Cell 1989 57 3 413 422 10.1016/0092-8674(89)90916-1 2720776
-
(1989)
Cell
, vol.57
, Issue.3
, pp. 413-422
-
-
Goto, T.1
MacDonald, P.2
Maniatis, T.3
-
2
-
-
0023441546
-
Complementary patterns of even-skipped and fushi tarazu expression involve their differential regulation by a common set of segmentation genes in Drosophila
-
10.1101/gad.1.9.981 2892761
-
Complementary patterns of even-skipped and fushi tarazu expression involve their differential regulation by a common set of segmentation genes in Drosophila. Frasch M, Levine M, Genes Dev 1987 1 9 981 995 10.1101/gad.1.9.981 2892761
-
(1987)
Genes Dev
, vol.1
, Issue.9
, pp. 981-995
-
-
Frasch, M.1
Levine, M.2
-
3
-
-
0036500609
-
A genomic regulatory network for development
-
10.1126/science.1069883 11872831
-
A genomic regulatory network for development. Davidson EH, Rast JP, Oliveri P, Ransick A, Calestani C, Yuh CH, Minokawa T, Amore G, Hinman V, Arenas-Mena C, et al. Science 2002 295 5560 1669 1678 10.1126/science.1069883 11872831
-
(2002)
Science
, vol.295
, Issue.5560
, pp. 1669-1678
-
-
Davidson, E.H.1
Rast, J.P.2
Oliveri, P.3
Ransick, A.4
Calestani, C.5
Yuh, C.H.6
Minokawa, T.7
Amore, G.8
Hinman, V.9
Arenas-Mena, C.10
-
4
-
-
0019811465
-
Expression of a beta-globin gene is enhanced by remote SV40 DNA sequences
-
6277502
-
Expression of a beta-globin gene is enhanced by remote SV40 DNA sequences. Banerji J, Rusconi S, Schaffner W, Cell 1981 27 2 Pt 1 299 308 6277502
-
(1981)
Cell
, vol.27
, Issue.2 PART 1
, pp. 299-308
-
-
Banerji, J.1
Rusconi, S.2
Schaffner, W.3
-
5
-
-
0032479079
-
Going the distance: A current view of enhancer action
-
9679020
-
Going the distance: a current view of enhancer action. Blackwood EM, Kadonaga JT, Science 1998 281 5373 60 63 9679020
-
(1998)
Science
, vol.281
, Issue.5373
, pp. 60-63
-
-
Blackwood, E.M.1
Kadonaga, J.T.2
-
6
-
-
0020534915
-
Enhancer elements
-
10.1016/0092-8674(83)90410-5 6305503
-
Enhancer elements. Khoury G, Gruss P, Cell 1983 33 2 313 314 10.1016/0092-8674(83)90410-5 6305503
-
(1983)
Cell
, vol.33
, Issue.2
, pp. 313-314
-
-
Khoury, G.1
Gruss, P.2
-
7
-
-
0037819447
-
Transcription regulation and animal diversity
-
10.1038/nature01763 12853946
-
Transcription regulation and animal diversity. Levine M, Tjian R, Nature 2003 424 6945 147 151 10.1038/nature01763 12853946
-
(2003)
Nature
, vol.424
, Issue.6945
, pp. 147-151
-
-
Levine, M.1
Tjian, R.2
-
8
-
-
33644989691
-
Long-range upstream and downstream enhancers control distinct subsets of the complex spatiotemporal Sox9 expression pattern
-
10.1016/j.ydbio.2005.11.013 16458883
-
Long-range upstream and downstream enhancers control distinct subsets of the complex spatiotemporal Sox9 expression pattern. Bagheri-Fam S, Barrionuevo F, Dohrmann U, Gunther T, Schule R, Kemler R, Mallo M, Kanzler B, Scherer G, Dev Biol 2006 291 2 382 397 10.1016/j.ydbio.2005.11.013 16458883
-
(2006)
Dev Biol
, vol.291
, Issue.2
, pp. 382-397
-
-
Bagheri-Fam, S.1
Barrionuevo, F.2
Dohrmann, U.3
Gunther, T.4
Schule, R.5
Kemler, R.6
Mallo, M.7
Kanzler, B.8
Scherer, G.9
-
9
-
-
52949123269
-
Identification of neural crest and glial enhancers at the mouse Sox10 locus through transgenesis in zebrafish
-
10.1371/journal.pgen.1000174 18773071
-
Identification of neural crest and glial enhancers at the mouse Sox10 locus through transgenesis in zebrafish. Antonellis A, Huynh JL, Lee-Lin SQ, Vinton RM, Renaud G, Loftus SK, Elliot G, Wolfsberg TG, Green ED, McCallion AS, et al. PLoS Genet 2008 4 9 1000174 10.1371/journal.pgen.1000174 18773071
-
(2008)
PLoS Genet
, vol.4
, Issue.9
, pp. 51000174
-
-
Antonellis, A.1
Huynh, J.L.2
Lee-Lin, S.Q.3
Vinton, R.M.4
Renaud, G.5
Loftus, S.K.6
Elliot, G.7
Wolfsberg, T.G.8
Green, E.D.9
McCallion, A.S.10
-
10
-
-
0019401409
-
DNase i hypersensitive sites in Drosophila chromatin occur at the 5' ends of regions of transcription
-
10.1073/pnas.78.1.143 6264428
-
DNase I hypersensitive sites in Drosophila chromatin occur at the 5' ends of regions of transcription. Keene MA, Corces V, Lowenhaupt K, Elgin SC, Proc Natl Acad Sci USA 1981 78 1 143 146 10.1073/pnas.78.1.143 6264428
-
(1981)
Proc Natl Acad Sci USA
, vol.78
, Issue.1
, pp. 143-146
-
-
Keene, M.A.1
Corces, V.2
Lowenhaupt, K.3
Elgin, S.C.4
-
11
-
-
0019787269
-
A 200 base pair region at the 5' end of the chicken adult beta-globin gene is accessible to nuclease digestion
-
6276024
-
A 200 base pair region at the 5' end of the chicken adult beta-globin gene is accessible to nuclease digestion. McGhee JD, Wood WI, Dolan M, Engel JD, Felsenfeld G, Cell 1981 27 1 Pt 2 45 55 6276024
-
(1981)
Cell
, vol.27
, Issue.1 PART 2
, pp. 45-55
-
-
McGhee, J.D.1
Wood, W.I.2
Dolan, M.3
Engel, J.D.4
Felsenfeld, G.5
-
12
-
-
33746875570
-
Cracking the genome's second code: Enhancer detection by combined phylogenetic footprinting and transgenic fish and frog embryos
-
10.1016/j.ymeth.2005.12.005 16806968
-
Cracking the genome's second code: enhancer detection by combined phylogenetic footprinting and transgenic fish and frog embryos. Allende ML, Manzanares M, Tena JJ, Feijoo CG, Gomez-Skarmeta JL, Methods 2006 39 3 212 219 10.1016/j.ymeth.2005.12.005 16806968
-
(2006)
Methods
, vol.39
, Issue.3
, pp. 212-219
-
-
Allende, M.L.1
Manzanares, M.2
Tena, J.J.3
Feijoo, C.G.4
Gomez-Skarmeta, J.L.5
-
13
-
-
33645833857
-
Conservation of RET regulatory function from human to zebrafish without sequence similarity
-
10.1126/science.1124070 16556802
-
Conservation of RET regulatory function from human to zebrafish without sequence similarity. Fisher S, Grice EA, Vinton RM, Bessling SL, McCallion AS, Science 2006 312 5771 276 279 10.1126/science.1124070 16556802
-
(2006)
Science
, vol.312
, Issue.5771
, pp. 276-279
-
-
Fisher, S.1
Grice, E.A.2
Vinton, R.M.3
Bessling, S.L.4
McCallion, A.S.5
-
14
-
-
33751316959
-
In vivo enhancer analysis of human conserved non-coding sequences
-
10.1038/nature05295 17086198
-
In vivo enhancer analysis of human conserved non-coding sequences. Pennacchio LA, Ahituv N, Moses AM, Prabhakar S, Nobrega MA, Shoukry M, Minovitsky S, Dubchak I, Holt A, Lewis KD, et al. Nature 2006 444 7118 499 502 10.1038/nature05295 17086198
-
(2006)
Nature
, vol.444
, Issue.7118
, pp. 499-502
-
-
Pennacchio, L.A.1
Ahituv, N.2
Moses, A.M.3
Prabhakar, S.4
Nobrega, M.A.5
Shoukry, M.6
Minovitsky, S.7
Dubchak, I.8
Holt, A.9
Lewis, K.D.10
-
15
-
-
48949089731
-
Detection and characterization of silencers and enhancer-blockers in the greater CFTR locus
-
10.1101/gr.073817.107 18436892
-
Detection and characterization of silencers and enhancer-blockers in the greater CFTR locus. Petrykowska HM, Vockley CM, Elnitski L, Genome Res 2008 18 8 1238 1246 10.1101/gr.073817.107 18436892
-
(2008)
Genome Res
, vol.18
, Issue.8
, pp. 1238-1246
-
-
Petrykowska, H.M.1
Vockley, C.M.2
Elnitski, L.3
-
16
-
-
1842667855
-
Characterization of evolutionary rates and constraints in three Mammalian genomes
-
10.1101/gr.2034704 15059994
-
Characterization of evolutionary rates and constraints in three Mammalian genomes. Cooper GM, Brudno M, Stone EA, Dubchak I, Batzoglou S, Sidow A, Genome Res 2004 14 4 539 548 10.1101/gr.2034704 15059994
-
(2004)
Genome Res
, vol.14
, Issue.4
, pp. 539-548
-
-
Cooper, G.M.1
Brudno, M.2
Stone, E.A.3
Dubchak, I.4
Batzoglou, S.5
Sidow, A.6
-
17
-
-
0036141877
-
Generation and comparative analysis of approximately 3.3 Mb of mouse genomic sequence orthologous to the region of human chromosome 7q11.23 implicated in Williams syndrome
-
10.1101/gr.214802 11779826
-
Generation and comparative analysis of approximately 3.3 Mb of mouse genomic sequence orthologous to the region of human chromosome 7q11.23 implicated in Williams syndrome. DeSilva U, Elnitski L, Idol JR, Doyle JL, Gan W, Thomas JW, Schwartz S, Dietrich NL, Beckstrom-Sternberg SM, McDowell JC, et al. Genome Res 2002 12 1 3 15 10.1101/gr.214802 11779826
-
(2002)
Genome Res
, vol.12
, Issue.1
, pp. 3-15
-
-
Desilva, U.1
Elnitski, L.2
Idol, J.R.3
Doyle, J.L.4
Gan, W.5
Thomas, J.W.6
Schwartz, S.7
Dietrich, N.L.8
Beckstrom-Sternberg, S.M.9
McDowell, J.C.10
-
18
-
-
22144473057
-
Arrays of ultraconserved non-coding regions span the loci of key developmental genes in vertebrate genomes
-
10.1186/1471-2164-5-99 15613238
-
Arrays of ultraconserved non-coding regions span the loci of key developmental genes in vertebrate genomes. Sandelin A, Bailey P, Bruce S, Engstrom PG, Klos JM, Wasserman WW, Ericson J, Lenhard B, BMC Genomics 2004 5 1 99 10.1186/1471-2164-5-99 15613238
-
(2004)
BMC Genomics
, vol.5
, Issue.1
, pp. 99
-
-
Sandelin, A.1
Bailey, P.2
Bruce, S.3
Engstrom, P.G.4
Klos, J.M.5
Wasserman, W.W.6
Ericson, J.7
Lenhard, B.8
-
19
-
-
20044366725
-
Highly conserved non-coding sequences are associated with vertebrate development
-
10.1371/journal.pbio.0030007 15630479
-
Highly conserved non-coding sequences are associated with vertebrate development. Woolfe A, Goodson M, Goode DK, Snell P, McEwen GK, Vavouri T, Smith SF, North P, Callaway H, Kelly K, et al. PLoS Biol 2005 3 1 7 10.1371/journal.pbio.0030007 15630479
-
(2005)
PLoS Biol
, vol.3
, Issue.1
, pp. 57
-
-
Woolfe, A.1
Goodson, M.2
Goode, D.K.3
Snell, P.4
McEwen, G.K.5
Vavouri, T.6
Smith, S.F.7
North, P.8
Callaway, H.9
Kelly, K.10
-
20
-
-
39049147650
-
Metrics of sequence constraint overlook regulatory sequences in an exhaustive analysis at phox2b
-
10.1101/gr.6929408 18071029
-
Metrics of sequence constraint overlook regulatory sequences in an exhaustive analysis at phox2b. McGaughey DM, Vinton RM, Huynh J, Al-Saif A, Beer MA, McCallion AS, Genome Res 2008 18 2 252 260 10.1101/gr.6929408 18071029
-
(2008)
Genome Res
, vol.18
, Issue.2
, pp. 252-260
-
-
McGaughey, D.M.1
Vinton, R.M.2
Huynh, J.3
Al-Saif, A.4
Beer, M.A.5
McCallion, A.S.6
-
21
-
-
77956641239
-
ChIP-Seq identification of weakly conserved heart enhancers
-
ChIP-Seq identification of weakly conserved heart enhancers. Blow MJ, McCulley DJ, Li Z, Zhang T, Akiyama JA, Holt A, Plajzer-Frick I, Shoukry M, Wright C, Chen F, et al. Nat Genet 42 9 806 810
-
Nat Genet
, vol.42
, Issue.9
, pp. 806-810
-
-
Blow, M.J.1
McCulley, D.J.2
Li, Z.3
Zhang, T.4
Akiyama, J.A.5
Holt, A.6
Plajzer-Frick, I.7
Shoukry, M.8
Wright, C.9
Chen, F.10
-
22
-
-
60149091656
-
ChIP-seq accurately predicts tissue-specific activity of enhancers
-
10.1038/nature07730 19212405
-
ChIP-seq accurately predicts tissue-specific activity of enhancers. Visel A, Blow MJ, Li Z, Zhang T, Akiyama JA, Holt A, Plajzer-Frick I, Shoukry M, Wright C, Chen F, et al. Nature 2009 457 7231 854 858 10.1038/nature07730 19212405
-
(2009)
Nature
, vol.457
, Issue.7231
, pp. 854-858
-
-
Visel, A.1
Blow, M.J.2
Li, Z.3
Zhang, T.4
Akiyama, J.A.5
Holt, A.6
Plajzer-Frick, I.7
Shoukry, M.8
Wright, C.9
Chen, F.10
-
23
-
-
33847334699
-
Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome
-
10.1038/ng1966 17277777
-
Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome. Heintzman ND, Stuart RK, Hon G, Fu Y, Ching CW, Hawkins RD, Barrera LO, Van Calcar S, Qu C, Ching KA, et al. Nat Genet 2007 39 3 311 318 10.1038/ng1966 17277777
-
(2007)
Nat Genet
, vol.39
, Issue.3
, pp. 311-318
-
-
Heintzman, N.D.1
Stuart, R.K.2
Hon, G.3
Fu, Y.4
Ching, C.W.5
Hawkins, R.D.6
Barrera, L.O.7
Van Calcar, S.8
Qu, C.9
Ching, K.A.10
-
24
-
-
65549104157
-
Histone modifications at human enhancers reflect global cell-type-specific gene expression
-
10.1038/nature07829 19295514
-
Histone modifications at human enhancers reflect global cell-type-specific gene expression. Heintzman ND, Hon GC, Hawkins RD, Kheradpour P, Stark A, Harp LF, Ye Z, Lee LK, Stuart RK, Ching CW, et al. Nature 2009 459 7243 108 112 10.1038/nature07829 19295514
-
(2009)
Nature
, vol.459
, Issue.7243
, pp. 108-112
-
-
Heintzman, N.D.1
Hon, G.C.2
Hawkins, R.D.3
Kheradpour, P.4
Stark, A.5
Harp, L.F.6
Ye, Z.7
Lee, L.K.8
Stuart, R.K.9
Ching, C.W.10
-
25
-
-
3042705822
-
Investigating the origins of triploblasty: 'Mesodermal' gene expression in a diploblastic animal, the sea anemone Nematostella vectensis (phylum, Cnidaria; Class, Anthozoa)
-
10.1242/dev.01119 15128674
-
Investigating the origins of triploblasty: 'mesodermal' gene expression in a diploblastic animal, the sea anemone Nematostella vectensis (phylum, Cnidaria; class, Anthozoa). Martindale MQ, Pang K, Finnerty JR, Development 2004 131 10 2463 2474 10.1242/dev.01119 15128674
-
(2004)
Development
, vol.131
, Issue.10
, pp. 2463-2474
-
-
Martindale, M.Q.1
Pang, K.2
Finnerty, J.R.3
-
26
-
-
0035917497
-
Mesendoderm. an ancient germ layer?
-
10.1016/S0092-8674(01)00307-5 11336666
-
Mesendoderm. an ancient germ layer? Rodaway A, Patient R, Cell 2001 105 2 169 172 10.1016/S0092-8674(01)00307-5 11336666
-
(2001)
Cell
, vol.105
, Issue.2
, pp. 169-172
-
-
Rodaway, A.1
Patient, R.2
-
27
-
-
8644243022
-
Multiple, distant Gata2 enhancers specify temporally and tissue-specific patterning in the developing urogenital system
-
10.1128/MCB.24.23.10263-10276.2004 15542836
-
Multiple, distant Gata2 enhancers specify temporally and tissue-specific patterning in the developing urogenital system. Khandekar M, Suzuki N, Lewton J, Yamamoto M, Engel JD, Mol Cell Biol 2004 24 23 10263 10276 10.1128/MCB.24.23. 10263-10276.2004 15542836
-
(2004)
Mol Cell Biol
, vol.24
, Issue.23
, pp. 10263-10276
-
-
Khandekar, M.1
Suzuki, N.2
Lewton, J.3
Yamamoto, M.4
Engel, J.D.5
-
28
-
-
0141519291
-
A general approach for identifying distant regulatory elements applied to the Gdf6 gene
-
10.1101/gr.1306003 12915490
-
A general approach for identifying distant regulatory elements applied to the Gdf6 gene. Mortlock DP, Guenther C, Kingsley DM, Genome Res 2003 13 9 2069 2081 10.1101/gr.1306003 12915490
-
(2003)
Genome Res
, vol.13
, Issue.9
, pp. 2069-2081
-
-
Mortlock, D.P.1
Guenther, C.2
Kingsley, D.M.3
-
29
-
-
0033379122
-
The murine Bapx1 homeobox gene plays a critical role in embryonic development of the axial skeleton and spleen
-
10572046
-
The murine Bapx1 homeobox gene plays a critical role in embryonic development of the axial skeleton and spleen. Tribioli C, Lufkin T, Development 1999 126 24 5699 5711 10572046
-
(1999)
Development
, vol.126
, Issue.24
, pp. 5699-5711
-
-
Tribioli, C.1
Lufkin, T.2
-
30
-
-
0034871175
-
The role of Bapx1 (Nkx3.2) in the development and evolution of the axial skeleton
-
11523821
-
The role of Bapx1 (Nkx3.2) in the development and evolution of the axial skeleton. Lettice L, Hecksher-Sorensen J, Hill R, J Anat 2001 199 Pt 1-2 181 187 11523821
-
(2001)
J Anat
, vol.199
, Issue.2 PART 1
, pp. 181-187
-
-
Lettice, L.1
Hecksher-Sorensen, J.2
Hill, R.3
-
31
-
-
0037383450
-
Two endothelin 1 effectors, hand2 and bapx1, pattern ventral pharyngeal cartilage and the jaw joint
-
10.1242/dev.00339 12588851
-
Two endothelin 1 effectors, hand2 and bapx1, pattern ventral pharyngeal cartilage and the jaw joint. Miller CT, Yelon D, Stainier DY, Kimmel CB, Development 2003 130 7 1353 1365 10.1242/dev.00339 12588851
-
(2003)
Development
, vol.130
, Issue.7
, pp. 1353-1365
-
-
Miller, C.T.1
Yelon, D.2
Stainier, D.Y.3
Kimmel, C.B.4
-
32
-
-
0347091741
-
Fgf and Bmp signals repress the expression of Bapx1 in the mandibular mesenchyme and control the position of the developing jaw joint
-
10.1016/j.ydbio.2003.10.012 14729484
-
Fgf and Bmp signals repress the expression of Bapx1 in the mandibular mesenchyme and control the position of the developing jaw joint. Wilson J, Tucker AS, Dev Biol 2004 266 1 138 150 10.1016/j.ydbio.2003.10.012 14729484
-
(2004)
Dev Biol
, vol.266
, Issue.1
, pp. 138-150
-
-
Wilson, J.1
Tucker, A.S.2
-
33
-
-
36448979156
-
Gene expression patterns underlying proximal-distal skeletal segmentation in late-stage zebrafish, Danio rerio
-
10.1002/dvdy.21352 17948314
-
Gene expression patterns underlying proximal-distal skeletal segmentation in late-stage zebrafish, Danio rerio. Crotwell PL, Mabee PM, Dev Dyn 2007 236 11 3111 3128 10.1002/dvdy.21352 17948314
-
(2007)
Dev Dyn
, vol.236
, Issue.11
, pp. 3111-3128
-
-
Crotwell, P.L.1
Mabee, P.M.2
-
34
-
-
77952304317
-
The role of post-transcriptional RNA processing and plasmid vector sequences on transient transgene expression in zebrafish
-
The role of post-transcriptional RNA processing and plasmid vector sequences on transient transgene expression in zebrafish. Chatterjee S, Min L, Karuturi RK, Lufkin T, Transgenic Res 19 2 299 304
-
Transgenic Res
, vol.19
, Issue.2
, pp. 299-304
-
-
Chatterjee, S.1
Min, L.2
Karuturi, R.K.3
Lufkin, T.4
-
35
-
-
43949138263
-
Function of Pax1 and Pax9 in the sclerotome of medaka fish
-
10.1002/dvg.20381 18395830
-
Function of Pax1 and Pax9 in the sclerotome of medaka fish. Mise T, Iijima M, Inohaya K, Kudo A, Wada H, Genesis 2008 46 4 185 192 10.1002/dvg.20381 18395830
-
(2008)
Genesis
, vol.46
, Issue.4
, pp. 185-192
-
-
Mise, T.1
Iijima, M.2
Inohaya, K.3
Kudo, A.4
Wada, H.5
-
36
-
-
33646161001
-
The developing lamprey ear closely resembles the zebrafish otic vesicle: Otx1 expression can account for all major patterning differences
-
10.1242/dev.02306 16510503
-
The developing lamprey ear closely resembles the zebrafish otic vesicle: otx1 expression can account for all major patterning differences. Hammond KL, Whitfield TT, Development 2006 133 7 1347 1357 10.1242/dev.02306 16510503
-
(2006)
Development
, vol.133
, Issue.7
, pp. 1347-1357
-
-
Hammond, K.L.1
Whitfield, T.T.2
-
37
-
-
33745061614
-
Differentiation of cerebellar cell identities in absence of Fgf signalling in zebrafish Otx morphants
-
10.1242/dev.02352 16611693
-
Differentiation of cerebellar cell identities in absence of Fgf signalling in zebrafish Otx morphants. Foucher I, Mione M, Simeone A, Acampora D, Bally-Cuif L, Houart C, Development 2006 133 10 1891 1900 10.1242/dev.02352 16611693
-
(2006)
Development
, vol.133
, Issue.10
, pp. 1891-1900
-
-
Foucher, I.1
Mione, M.2
Simeone, A.3
Acampora, D.4
Bally-Cuif, L.5
Houart, C.6
-
38
-
-
0027318791
-
Differential expression of multiple fork head related genes during gastrulation and axial pattern formation in the mouse embryo
-
8375339
-
Differential expression of multiple fork head related genes during gastrulation and axial pattern formation in the mouse embryo. Sasaki H, Hogan BL, Development 1993 118 1 47 59 8375339
-
(1993)
Development
, vol.118
, Issue.1
, pp. 47-59
-
-
Sasaki, H.1
Hogan, B.L.2
-
39
-
-
0027425136
-
The formation and maintenance of the definitive endoderm lineage in the mouse: Involvement of HNF3/forkhead proteins
-
8306889
-
The formation and maintenance of the definitive endoderm lineage in the mouse: involvement of HNF3/forkhead proteins. Ang SL, Wierda A, Wong D, Stevens KA, Cascio S, Rossant J, Zaret KS, Development 1993 119 4 1301 1315 8306889
-
(1993)
Development
, vol.119
, Issue.4
, pp. 1301-1315
-
-
Ang, S.L.1
Wierda, A.2
Wong, D.3
Stevens, K.A.4
Cascio, S.5
Rossant, J.6
Zaret, K.S.7
-
40
-
-
0027425313
-
Postimplantation expression patterns indicate a role for the mouse forkhead/HNF-3 alpha, beta and gamma genes in determination of the definitive endoderm, chordamesoderm and neuroectoderm
-
8187630
-
Postimplantation expression patterns indicate a role for the mouse forkhead/HNF-3 alpha, beta and gamma genes in determination of the definitive endoderm, chordamesoderm and neuroectoderm. Monaghan AP, Kaestner KH, Grau E, Schutz G, Development 1993 119 3 567 578 8187630
-
(1993)
Development
, vol.119
, Issue.3
, pp. 567-578
-
-
Monaghan, A.P.1
Kaestner, K.H.2
Grau, E.3
Schutz, G.4
-
41
-
-
20144367738
-
Monorail/Foxa2 regulates floorplate differentiation and specification of oligodendrocytes, serotonergic raphe neurones and cranial motoneurones
-
10.1242/dev.01611 15677724
-
Monorail/Foxa2 regulates floorplate differentiation and specification of oligodendrocytes, serotonergic raphe neurones and cranial motoneurones. Norton WH, Mangoli M, Lele Z, Pogoda HM, Diamond B, Mercurio S, Russell C, Teraoka H, Stickney HL, Rauch GJ, et al. Development 2005 132 4 645 658 10.1242/dev.01611 15677724
-
(2005)
Development
, vol.132
, Issue.4
, pp. 645-658
-
-
Norton, W.H.1
Mangoli, M.2
Lele, Z.3
Pogoda, H.M.4
Diamond, B.5
Mercurio, S.6
Russell, C.7
Teraoka, H.8
Stickney, H.L.9
Rauch, G.J.10
-
42
-
-
0029960055
-
TRANSFAC: A database on transcription factors and their DNA binding sites
-
10.1093/nar/24.1.238 8594589
-
TRANSFAC: a database on transcription factors and their DNA binding sites. Wingender E, Dietze P, Karas H, Knuppel R, Nucleic Acids Res 1996 24 1 238 241 10.1093/nar/24.1.238 8594589
-
(1996)
Nucleic Acids Res
, vol.24
, Issue.1
, pp. 238-241
-
-
Wingender, E.1
Dietze, P.2
Karas, H.3
Knuppel, R.4
-
43
-
-
46249134068
-
Sepsid even-skipped enhancers are functionally conserved in Drosophila despite lack of sequence conservation
-
10.1371/journal.pgen.1000106 18584029
-
Sepsid even-skipped enhancers are functionally conserved in Drosophila despite lack of sequence conservation. Hare EE, Peterson BK, Iyer VN, Meier R, Eisen MB, PLoS Genet 2008 4 6 1000106 10.1371/journal.pgen.1000106 18584029
-
(2008)
PLoS Genet
, vol.4
, Issue.6
, pp. 51000106
-
-
Hare, E.E.1
Peterson, B.K.2
Iyer, V.N.3
Meier, R.4
Eisen, M.B.5
-
44
-
-
72649101692
-
A systematic approach to identify functional motifs within vertebrate developmental enhancers
-
A systematic approach to identify functional motifs within vertebrate developmental enhancers. Li Q, Ritter D, Yang N, Dong Z, Li H, Chuang JH, Guo S, Dev Biol 337 2 484 495
-
Dev Biol
, vol.337
, Issue.2
, pp. 484-495
-
-
Li, Q.1
Ritter, D.2
Yang, N.3
Dong, Z.4
Li, H.5
Chuang, J.H.6
Guo, S.7
-
45
-
-
0242401835
-
A gene expression atlas of the central nervous system based on bacterial artificial chromosomes
-
10.1038/nature02033 14586460
-
A gene expression atlas of the central nervous system based on bacterial artificial chromosomes. Gong S, Zheng C, Doughty ML, Losos K, Didkovsky N, Schambra UB, Nowak NJ, Joyner A, Leblanc G, Hatten ME, et al. Nature 2003 425 6961 917 925 10.1038/nature02033 14586460
-
(2003)
Nature
, vol.425
, Issue.6961
, pp. 917-925
-
-
Gong, S.1
Zheng, C.2
Doughty, M.L.3
Losos, K.4
Didkovsky, N.5
Schambra, U.B.6
Nowak, N.J.7
Joyner, A.8
Leblanc, G.9
Hatten, M.E.10
-
46
-
-
33847093466
-
Hierarchical regulation of odorant receptor gene choice and subsequent axonal projection of olfactory sensory neurons in zebrafish
-
10.1523/JNEUROSCI.4218-06.2007 17301169
-
Hierarchical regulation of odorant receptor gene choice and subsequent axonal projection of olfactory sensory neurons in zebrafish. Sato Y, Miyasaka N, Yoshihara Y, J Neurosci 2007 27 7 1606 1615 10.1523/JNEUROSCI.4218-06.2007 17301169
-
(2007)
J Neurosci
, vol.27
, Issue.7
, pp. 1606-1615
-
-
Sato, Y.1
Miyasaka, N.2
Yoshihara, Y.3
-
47
-
-
0032574847
-
Modification of bacterial artificial chromosomes through chi-stimulated homologous recombination and its application in zebrafish transgenesis
-
10.1073/pnas.95.9.5121 9560239
-
Modification of bacterial artificial chromosomes through chi-stimulated homologous recombination and its application in zebrafish transgenesis. Jessen JR, Meng A, McFarlane RJ, Paw BH, Zon LI, Smith GR, Lin S, Proc Natl Acad Sci USA 1998 95 9 5121 5126 10.1073/pnas.95.9.5121 9560239
-
(1998)
Proc Natl Acad Sci USA
, vol.95
, Issue.9
, pp. 5121-5126
-
-
Jessen, J.R.1
Meng, A.2
McFarlane, R.J.3
Paw, B.H.4
Zon, L.I.5
Smith, G.R.6
Lin, S.7
-
48
-
-
33746875204
-
Modified bacterial artificial chromosomes for zebrafish transgenesis
-
10.1016/j.ymeth.2006.04.011 16828309
-
Modified bacterial artificial chromosomes for zebrafish transgenesis. Yang Z, Jiang H, Chachainasakul T, Gong S, Yang XW, Heintz N, Lin S, Methods 2006 39 3 183 188 10.1016/j.ymeth.2006.04.011 16828309
-
(2006)
Methods
, vol.39
, Issue.3
, pp. 183-188
-
-
Yang, Z.1
Jiang, H.2
Chachainasakul, T.3
Gong, S.4
Yang, X.W.5
Heintz, N.6
Lin, S.7
-
49
-
-
0030728460
-
GATA-1 expression pattern can be recapitulated in living transgenic zebrafish using GFP reporter gene
-
9374406
-
GATA-1 expression pattern can be recapitulated in living transgenic zebrafish using GFP reporter gene. Long Q, Meng A, Wang H, Jessen JR, Farrell MJ, Lin S, Development 1997 124 20 4105 4111 9374406
-
(1997)
Development
, vol.124
, Issue.20
, pp. 4105-4111
-
-
Long, Q.1
Meng, A.2
Wang, H.3
Jessen, J.R.4
Farrell, M.J.5
Lin, S.6
-
50
-
-
15244358503
-
Systematic discovery of regulatory motifs in human promoters and 3' UTRs by comparison of several mammals
-
10.1038/nature03441 15735639
-
Systematic discovery of regulatory motifs in human promoters and 3' UTRs by comparison of several mammals. Xie X, Lu J, Kulbokas EJ, Golub TR, Mootha V, Lindblad-Toh K, Lander ES, Kellis M, Nature 2005 434 7031 338 345 10.1038/nature03441 15735639
-
(2005)
Nature
, vol.434
, Issue.7031
, pp. 338-345
-
-
Xie, X.1
Lu, J.2
Kulbokas, E.J.3
Golub, T.R.4
Mootha, V.5
Lindblad-Toh, K.6
Lander, E.S.7
Kellis, M.8
-
51
-
-
2542542256
-
Ultraconserved elements in the human genome
-
10.1126/science.1098119 15131266
-
Ultraconserved elements in the human genome. Bejerano G, Pheasant M, Makunin I, Stephen S, Kent WJ, Mattick JS, Haussler D, Science 2004 304 5675 1321 1325 10.1126/science.1098119 15131266
-
(2004)
Science
, vol.304
, Issue.5675
, pp. 1321-1325
-
-
Bejerano, G.1
Pheasant, M.2
Makunin, I.3
Stephen, S.4
Kent, W.J.5
Mattick, J.S.6
Haussler, D.7
-
52
-
-
0037372327
-
A significant fraction of conserved noncoding DNA in human and mouse consists of predicted matrix attachment regions
-
10.1016/S0168-9525(03)00016-7 12615002
-
A significant fraction of conserved noncoding DNA in human and mouse consists of predicted matrix attachment regions. Glazko GV, Koonin EV, Rogozin IB, Shabalina SA, Trends Genet 2003 19 3 119 124 10.1016/S0168-9525(03)00016-7 12615002
-
(2003)
Trends Genet
, vol.19
, Issue.3
, pp. 119-124
-
-
Glazko, G.V.1
Koonin, E.V.2
Rogozin, I.B.3
Shabalina, S.A.4
-
53
-
-
33646744721
-
Evidence for control of splicing by alternative RNA secondary structures in Dipteran homothorax pre-mRNA
-
10.4161/rna.3.1.2719 17114937
-
Evidence for control of splicing by alternative RNA secondary structures in Dipteran homothorax pre-mRNA. Glazov EA, Pheasant M, Nahkuri S, Mattick JS, RNA Biol 2006 3 1 36 39 10.4161/rna.3.1.2719 17114937
-
(2006)
RNA Biol
, vol.3
, Issue.1
, pp. 36-39
-
-
Glazov, E.A.1
Pheasant, M.2
Nahkuri, S.3
Mattick, J.S.4
-
54
-
-
33646928347
-
A distal enhancer and an ultraconserved exon are derived from a novel retroposon
-
10.1038/nature04696 16625209
-
A distal enhancer and an ultraconserved exon are derived from a novel retroposon. Bejerano G, Lowe CB, Ahituv N, King B, Siepel A, Salama SR, Rubin EM, Kent WJ, Haussler D, Nature 2006 441 7089 87 90 10.1038/nature04696 16625209
-
(2006)
Nature
, vol.441
, Issue.7089
, pp. 87-90
-
-
Bejerano, G.1
Lowe, C.B.2
Ahituv, N.3
King, B.4
Siepel, A.5
Salama, S.R.6
Rubin, E.M.7
Kent, W.J.8
Haussler, D.9
-
55
-
-
6944256712
-
Sequence and embryonic expression of three zebrafish fringe genes: Lunatic fringe, radical fringe, and manic fringe
-
10.1002/dvdy.20155 15376327
-
Sequence and embryonic expression of three zebrafish fringe genes: lunatic fringe, radical fringe, and manic fringe. Qiu X, Xu H, Haddon C, Lewis J, Jiang YJ, Dev Dyn 2004 231 3 621 630 10.1002/dvdy.20155 15376327
-
(2004)
Dev Dyn
, vol.231
, Issue.3
, pp. 621-630
-
-
Qiu, X.1
Xu, H.2
Haddon, C.3
Lewis, J.4
Jiang, Y.J.5
-
56
-
-
0029045033
-
Stages of embryonic development of the zebrafish
-
10.1002/aja.1002030302 8589427
-
Stages of embryonic development of the zebrafish. Kimmel CB, Ballard WW, Kimmel SR, Ullmann B, Schilling TF, Dev Dyn 1995 203 3 253 310 10.1002/aja.1002030302 8589427
-
(1995)
Dev Dyn
, vol.203
, Issue.3
, pp. 253-310
-
-
Kimmel, C.B.1
Ballard, W.W.2
Kimmel, S.R.3
Ullmann, B.4
Schilling, T.F.5
-
57
-
-
1842374429
-
Activator effect of coinjected enhancers on the muscle-specific expression of promoters in zebrafish embryos
-
10.1002/(SICI)1098-2795(199708)47:4<404: AID-MRD6>3.0.CO;2-O 9211424
-
Activator effect of coinjected enhancers on the muscle-specific expression of promoters in zebrafish embryos. Muller F, Williams DW, Kobolak J, Gauvry L, Goldspink G, Orban L, Maclean N, Mol Reprod Dev 1997 47 4 404 412 10.1002/(SICI)1098-2795(199708)47:4<404::AID-MRD6>3.0.CO;2-O 9211424
-
(1997)
Mol Reprod Dev
, vol.47
, Issue.4
, pp. 404-412
-
-
Muller, F.1
Williams, D.W.2
Kobolak, J.3
Gauvry, L.4
Goldspink, G.5
Orban, L.6
MacLean, N.7
-
58
-
-
79951528195
-
Minor change, major difference: Divergent functions of highly conserved cis-regulatory elements subsequent to whole genome duplication events
-
Minor change, major difference: divergent functions of highly conserved cis-regulatory elements subsequent to whole genome duplication events. Goode DK, Callaway HA, Cerda GA, Lewis KE, Elgar G, Development 138 5 879 884
-
Development
, vol.138
, Issue.5
, pp. 879-884
-
-
Goode, D.K.1
Callaway, H.A.2
Cerda, G.A.3
Lewis, K.E.4
Elgar, G.5
-
59
-
-
79960342425
-
Fishing for function: Zebrafish BAC transgenics for functional genomics
-
10.1039/c1mb05116d 21647532
-
Fishing for function: zebrafish BAC transgenics for functional genomics. Chatterjee S, Lufkin T, Mol Biosyst 2011 7 8 2345 2351 10.1039/c1mb05116d 21647532
-
(2011)
Mol Biosyst
, vol.7
, Issue.8
, pp. 2345-2351
-
-
Chatterjee, S.1
Lufkin, T.2
|