메뉴 건너뛰기




Volumn 44, Issue 1, 2012, Pages 75-80

Co-tolerance to zinc and copper of the soil nitrifying community and its relationship with the community structure

Author keywords

Co tolerance; Convergence; DGGE; Nitrifying community; Zinc

Indexed keywords

AMMONIA OXIDIZING BACTERIA; CO-TOLERANCE; COMMUNITY STRUCTURES; CONVERGENCE; CU TOLERANCE; DGGE; MICROBIAL COMMUNITIES; NITRIFYING COMMUNITY; PHYLOTYPES; SOIL CONTAMINATION; SOIL MICROBIAL COMMUNITY; TOLERANCE MECHANISMS; TRACE METAL; UNCONTAMINATED SOILS;

EID: 80053962334     PISSN: 00380717     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.soilbio.2011.09.017     Document Type: Article
Times cited : (18)

References (39)
  • 1
    • 34648812983 scopus 로고    scopus 로고
    • Experimentally induced effects of heavy metal on microbial activity and community structure of forest mor layers
    • Akerblom S., Bååth E., Bringmark L., Bringmark E. Experimentally induced effects of heavy metal on microbial activity and community structure of forest mor layers. Biology and Fertility of Soils 2007, 44:79-91.
    • (2007) Biology and Fertility of Soils , vol.44 , pp. 79-91
    • Akerblom, S.1    Bååth, E.2    Bringmark, L.3    Bringmark, E.4
  • 2
    • 1842812540 scopus 로고    scopus 로고
    • Changes in tolerance of soil microbial communities in Zn and Cd contaminated soils
    • Almås A.R., Bakken L.R., Mulder J. Changes in tolerance of soil microbial communities in Zn and Cd contaminated soils. Soil Biology and Biochemistry 2004, 36:805-813.
    • (2004) Soil Biology and Biochemistry , vol.36 , pp. 805-813
    • Almås, A.R.1    Bakken, L.R.2    Mulder, J.3
  • 3
    • 67649239460 scopus 로고    scopus 로고
    • Molecular and functional assessment of bacterial community convergence in metal-amended soils
    • Anderson J.A.H., Hooper M.J., Zak J.C., Cox S.B. Molecular and functional assessment of bacterial community convergence in metal-amended soils. Microbial Ecology 2009, 58:10-22.
    • (2009) Microbial Ecology , vol.58 , pp. 10-22
    • Anderson, J.A.H.1    Hooper, M.J.2    Zak, J.C.3    Cox, S.B.4
  • 4
    • 0031934397 scopus 로고    scopus 로고
    • Microbial community-based measurements to estimate heavy metal effects in soil: the use of phospholipid fatty acid patterns and bacterial community tolerance
    • Bååth E., Frostegård A., Díaz-Raviña M., Tunlid A. Microbial community-based measurements to estimate heavy metal effects in soil: the use of phospholipid fatty acid patterns and bacterial community tolerance. Ambio 1998, 27:58-61.
    • (1998) Ambio , vol.27 , pp. 58-61
    • Bååth, E.1    Frostegård, A.2    Díaz-Raviña, M.3    Tunlid, A.4
  • 7
    • 0029659521 scopus 로고    scopus 로고
    • Development of metal tolerance in soil bacterial communities exposed to experimentally increased metal levels
    • Díaz-Raviña M., Bååth E. Development of metal tolerance in soil bacterial communities exposed to experimentally increased metal levels. Applied and Environmental Microbiology 1996, 62:2970-2977.
    • (1996) Applied and Environmental Microbiology , vol.62 , pp. 2970-2977
    • Díaz-Raviña, M.1    Bååth, E.2
  • 8
    • 0028160775 scopus 로고
    • Multiple heavy-metal tolerance of soil bacterial communities and its measurement by a thymidine incorporation technique
    • Díaz-Raviña M., Bååth E., Frostegård Å Multiple heavy-metal tolerance of soil bacterial communities and its measurement by a thymidine incorporation technique. Applied and Environmental Microbiology 1994, 60:2238-2247.
    • (1994) Applied and Environmental Microbiology , vol.60 , pp. 2238-2247
    • Díaz-Raviña, M.1    Bååth, E.2    Frostegård Å3
  • 9
    • 0024873914 scopus 로고
    • Short-term and long-term effects of heavy-metals on phosphatase-activity in soils - an ecological dose-response model approach
    • Doelman P., Haanstra L. Short-term and long-term effects of heavy-metals on phosphatase-activity in soils - an ecological dose-response model approach. Biology and Fertility of Soils 1989, 8:235-241.
    • (1989) Biology and Fertility of Soils , vol.8 , pp. 235-241
    • Doelman, P.1    Haanstra, L.2
  • 12
    • 0027484760 scopus 로고
    • Phospholipid fatty-acid composition, biomass, and activity of microbial communities from 2 soil types experimentally exposed to different heavy-metals
    • Frostegård A., Tunlid A., Bååth E. Phospholipid fatty-acid composition, biomass, and activity of microbial communities from 2 soil types experimentally exposed to different heavy-metals. Applied and Environmental Microbiology 1993, 59:3605-3617.
    • (1993) Applied and Environmental Microbiology , vol.59 , pp. 3605-3617
    • Frostegård, A.1    Tunlid, A.2    Bååth, E.3
  • 13
    • 0029667019 scopus 로고    scopus 로고
    • Changes in microbial community structure during long-term incubation in two soils experimentally contaminated with metals
    • Frostegård A., Tunlid A., Bååth E. Changes in microbial community structure during long-term incubation in two soils experimentally contaminated with metals. Soil Biology and Biochemistry 1996, 28:55-63.
    • (1996) Soil Biology and Biochemistry , vol.28 , pp. 55-63
    • Frostegård, A.1    Tunlid, A.2    Bååth, E.3
  • 14
    • 0032171231 scopus 로고    scopus 로고
    • Toxicity of heavy metals to microorganisms and microbial processes in agricultural soils: a review
    • Giller K.E., Witter E., McGrath S.P. Toxicity of heavy metals to microorganisms and microbial processes in agricultural soils: a review. Soil Biology and Biochemistry 1998, 30:1389-1414.
    • (1998) Soil Biology and Biochemistry , vol.30 , pp. 1389-1414
    • Giller, K.E.1    Witter, E.2    McGrath, S.P.3
  • 15
    • 0034868585 scopus 로고    scopus 로고
    • Distribution and ecophysiology of the nitrifying bacteria emphasizing cultured species
    • Koops H.P., Pommerening-Roser A. Distribution and ecophysiology of the nitrifying bacteria emphasizing cultured species. FEMS Microbiology Ecology 2001, 37:1-9.
    • (2001) FEMS Microbiology Ecology , vol.37 , pp. 1-9
    • Koops, H.P.1    Pommerening-Roser, A.2
  • 16
    • 3242810318 scopus 로고    scopus 로고
    • MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment
    • Kumar S., Tamura K., Nei M. MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Briefings in Bioinformatics 2004, 5:150-163.
    • (2004) Briefings in Bioinformatics , vol.5 , pp. 150-163
    • Kumar, S.1    Tamura, K.2    Nei, M.3
  • 17
    • 0026017577 scopus 로고
    • Towards an understanding of the genetics of bacterial metal resistance
    • Mergeay M. Towards an understanding of the genetics of bacterial metal resistance. Trends in Biotechnology 1991, 9:17-24.
    • (1991) Trends in Biotechnology , vol.9 , pp. 17-24
    • Mergeay, M.1
  • 19
    • 33750919757 scopus 로고    scopus 로고
    • Long-term exposure to elevated zinc concentrations induced structural changes and zinc tolerance of the nitrifying community in soil
    • Mertens J., Springael D., De Troyer I., Cheyns K., Wattiau P., Smolders E. Long-term exposure to elevated zinc concentrations induced structural changes and zinc tolerance of the nitrifying community in soil. Environmental Microbiology 2006, 8:2170-2178.
    • (2006) Environmental Microbiology , vol.8 , pp. 2170-2178
    • Mertens, J.1    Springael, D.2    De Troyer, I.3    Cheyns, K.4    Wattiau, P.5    Smolders, E.6
  • 20
    • 77952254061 scopus 로고    scopus 로고
    • Extent of copper tolerance and consequences for functional stability of the ammonia-oxidizing community in long-term copper-contaminated soils
    • Mertens J., Wakelin S.A., Broos K., McLaughlin M.J., Smolders E. Extent of copper tolerance and consequences for functional stability of the ammonia-oxidizing community in long-term copper-contaminated soils. Environmental Toxicology and Chemistry 2010, 29:27-37.
    • (2010) Environmental Toxicology and Chemistry , vol.29 , pp. 27-37
    • Mertens, J.1    Wakelin, S.A.2    Broos, K.3    McLaughlin, M.J.4    Smolders, E.5
  • 21
    • 4544376627 scopus 로고    scopus 로고
    • Contaminant-adaptation and community tolerance in ecological risk assessment: introduction
    • Millward R.N., Klerks P.L. Contaminant-adaptation and community tolerance in ecological risk assessment: introduction. Human and Ecological Risk Assessment 2002, 8:921-932.
    • (2002) Human and Ecological Risk Assessment , vol.8 , pp. 921-932
    • Millward, R.N.1    Klerks, P.L.2
  • 23
    • 33747894093 scopus 로고    scopus 로고
    • Pollution-induced community tolerance of microorganisms from forest soil organic layers polluted with Zn or Cu
    • Niklinska M., Chodak M., Laskowski R. Pollution-induced community tolerance of microorganisms from forest soil organic layers polluted with Zn or Cu. Applied Soil Ecology 2006, 32:265-272.
    • (2006) Applied Soil Ecology , vol.32 , pp. 265-272
    • Niklinska, M.1    Chodak, M.2    Laskowski, R.3
  • 24
    • 33644642665 scopus 로고    scopus 로고
    • Discrepancy of the microbial response to elevated copper between freshly spiked and long-term contaminated soils
    • Oorts K., Bronckaers H., Smolders E. Discrepancy of the microbial response to elevated copper between freshly spiked and long-term contaminated soils. Environmental Toxicology and Chemistry 2006, 25:845-853.
    • (2006) Environmental Toxicology and Chemistry , vol.25 , pp. 845-853
    • Oorts, K.1    Bronckaers, H.2    Smolders, E.3
  • 25
    • 43449104759 scopus 로고    scopus 로고
    • Genome-wide transcriptional responses of Nitrosomonas europaea to zinc
    • Park S., Ely R.L. Genome-wide transcriptional responses of Nitrosomonas europaea to zinc. Archives of Microbiology 2008, 189:541-548.
    • (2008) Archives of Microbiology , vol.189 , pp. 541-548
    • Park, S.1    Ely, R.L.2
  • 26
    • 35348933745 scopus 로고    scopus 로고
    • Multivariate analyses in microbial ecology
    • Ramette A. Multivariate analyses in microbial ecology. FEMS Microbiology Ecology 2007, 62:142-160.
    • (2007) FEMS Microbiology Ecology , vol.62 , pp. 142-160
    • Ramette, A.1
  • 27
    • 0030814870 scopus 로고    scopus 로고
    • The ammonia monooxygenase structural gene amoA as a functional marker: molecular fine-scale analysis of natural ammonia-oxidizing populations
    • Rotthauwe J.H., Witzel K.P., Liesack W. The ammonia monooxygenase structural gene amoA as a functional marker: molecular fine-scale analysis of natural ammonia-oxidizing populations. Applied and Environmental Microbiology 1997, 63:4704-4712.
    • (1997) Applied and Environmental Microbiology , vol.63 , pp. 4704-4712
    • Rotthauwe, J.H.1    Witzel, K.P.2    Liesack, W.3
  • 29
    • 77949267703 scopus 로고    scopus 로고
    • Stimulated activity of the soil nitrifying community accelerates community adaptation to Zn stress
    • Ruyters S., Mertens J., Springael D., Smolders E. Stimulated activity of the soil nitrifying community accelerates community adaptation to Zn stress. Soil Biology and Biochemistry 2010, 42:766-772.
    • (2010) Soil Biology and Biochemistry , vol.42 , pp. 766-772
    • Ruyters, S.1    Mertens, J.2    Springael, D.3    Smolders, E.4
  • 30
    • 21544464548 scopus 로고    scopus 로고
    • Multiple metal resistant transferable phenotypes in bacteria as indicators of soil contamination with heavy metals
    • Ryan R.P., Ryan D.J., Dowling D.N. Multiple metal resistant transferable phenotypes in bacteria as indicators of soil contamination with heavy metals. Journal of Soils and Sediments 2005, 5:95-100.
    • (2005) Journal of Soils and Sediments , vol.5 , pp. 95-100
    • Ryan, R.P.1    Ryan, D.J.2    Dowling, D.N.3
  • 32
    • 5444254332 scopus 로고    scopus 로고
    • Soil properties affecting toxicity of zinc to soil microbial properties in laboratory-spiked and field-contaminated soils
    • Smolders E., Buekers J., Oliver I., McLaughlin M.J. Soil properties affecting toxicity of zinc to soil microbial properties in laboratory-spiked and field-contaminated soils. Environmental Toxicology and Chemistry 2004, 23:2633-2640.
    • (2004) Environmental Toxicology and Chemistry , vol.23 , pp. 2633-2640
    • Smolders, E.1    Buekers, J.2    Oliver, I.3    McLaughlin, M.J.4
  • 33
    • 0031904158 scopus 로고    scopus 로고
    • Analysis of beta-subgroup proteobacterial ammonia oxidizer populations in soil by denaturing gradient gel electrophoresis analysis and hierarchical phylogenetic probing
    • Stephen J.R., Kowalchuk G.A., Bruns M.A.V., McCaig A.E., Phillips C.J., Embley T.M., Prosser J.I. Analysis of beta-subgroup proteobacterial ammonia oxidizer populations in soil by denaturing gradient gel electrophoresis analysis and hierarchical phylogenetic probing. Applied and Environmental Microbiology 1998, 64:2958-2965.
    • (1998) Applied and Environmental Microbiology , vol.64 , pp. 2958-2965
    • Stephen, J.R.1    Kowalchuk, G.A.2    Bruns, M.A.V.3    McCaig, A.E.4    Phillips, C.J.5    Embley, T.M.6    Prosser, J.I.7
  • 34
    • 0027968068 scopus 로고
    • Clustal-W - improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson J.D., Higgins D.G., Gibson T.J. Clustal-W - improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Research 1994, 22:4673-4680.
    • (1994) Nucleic Acids Research , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 35
    • 0348136601 scopus 로고    scopus 로고
    • Modelling the chemical speciation of trace metals in the surface waters of the Humber system
    • Tipping E., Lofts S., Lawlor A.J. Modelling the chemical speciation of trace metals in the surface waters of the Humber system. Science of the Total Environment 1998, 210:63-77.
    • (1998) Science of the Total Environment , vol.210 , pp. 63-77
    • Tipping, E.1    Lofts, S.2    Lawlor, A.J.3
  • 36
    • 33751022546 scopus 로고    scopus 로고
    • Functional stability of microbial communities from long-term stressed soils to additional disturbance
    • Tobor-Kaplon M.A., Bloem J., De Ruiter P.C. Functional stability of microbial communities from long-term stressed soils to additional disturbance. Environmental Toxicology and Chemistry 2006, 25:1993-1999.
    • (2006) Environmental Toxicology and Chemistry , vol.25 , pp. 1993-1999
    • Tobor-Kaplon, M.A.1    Bloem, J.2    De Ruiter, P.C.3
  • 37
    • 33644589356 scopus 로고    scopus 로고
    • Functional stability of microbial communities in contaminated soils near a zinc smelter (Budel, The Netherlands)
    • Tobor-Kaplon M.A., Bloem J., Romkens P.F.A.M., De Ruiter P.C. Functional stability of microbial communities in contaminated soils near a zinc smelter (Budel, The Netherlands). Ecotoxicology 2006, 15:187-197.
    • (2006) Ecotoxicology , vol.15 , pp. 187-197
    • Tobor-Kaplon, M.A.1    Bloem, J.2    Romkens, P.F.A.M.3    De Ruiter, P.C.4
  • 39
    • 0033895204 scopus 로고    scopus 로고
    • A study of the structure and metal tolerance of the soil microbial community six years after cessation of sewage sludge applications
    • Witter E., Gong P., Bååth E., Marstorp H. A study of the structure and metal tolerance of the soil microbial community six years after cessation of sewage sludge applications. Environmental Toxicology and Chemistry 2000, 19:1983-1991.
    • (2000) Environmental Toxicology and Chemistry , vol.19 , pp. 1983-1991
    • Witter, E.1    Gong, P.2    Bååth, E.3    Marstorp, H.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.