-
1
-
-
0002654469
-
Urease activity in neutrophilic autotrophic ammonia oxidising bacteria isolated from acid soils
-
Allison, S. M., and J. I. Prosser. 1991. Urease activity in neutrophilic autotrophic ammonia oxidising bacteria isolated from acid soils. Soil Biol. Biochem. 23:45-51.
-
(1991)
Soil Biol. Biochem.
, vol.23
, pp. 45-51
-
-
Allison, S.M.1
Prosser, J.I.2
-
2
-
-
0002548207
-
Ammonia oxidation at low pH by attached populations of nitrifying bacteria
-
Allison, S. M., and J. I. Prosser. 1993. Ammonia oxidation at low pH by attached populations of nitrifying bacteria. Soil Biol. Biochem. 25:935-941.
-
(1993)
Soil Biol. Biochem.
, vol.25
, pp. 935-941
-
-
Allison, S.M.1
Prosser, J.I.2
-
3
-
-
0019513663
-
Gene organisation and primary structure of a ribosomal RNA operon from Escherichia coli
-
Brosius, J., T. L. Dull, D. D. Sleeter, and H. F. Noller. 1981. Gene organisation and primary structure of a ribosomal RNA operon from Escherichia coli. J. Mol. Biol. 148:107-127.
-
(1981)
J. Mol. Biol.
, vol.148
, pp. 107-127
-
-
Brosius, J.1
Dull, T.L.2
Sleeter, D.D.3
Noller, H.F.4
-
4
-
-
0011279020
-
Ureolytic nitrification at low pH by Nitrosospira species
-
De Boer, W., and H. J. Laanbroek. 1989. Ureolytic nitrification at low pH by Nitrosospira species. Arch. Microbiol. 152:935-941.
-
(1989)
Arch. Microbiol.
, vol.152
, pp. 935-941
-
-
De Boer, W.1
Laanbroek, H.J.2
-
5
-
-
0024164999
-
Autotrophic nitrification in a fertilized acid heath soil
-
De Boer, W., H. Duyts, and H. J. Laanbroek. 1988. Autotrophic nitrification in a fertilized acid heath soil. Soil Biol. Biochem. 20:845-850.
-
(1988)
Soil Biol. Biochem.
, vol.20
, pp. 845-850
-
-
De Boer, W.1
Duyts, H.2
Laanbroek, H.J.3
-
6
-
-
0025919711
-
Nitrification at low pH by aggregated chemolithotrophic bacteria
-
De Boer, W., P. J. A. Klein Gunnewiek, M. Veenhuis, E. Bock, and H. J. Laanbroek. 1991. Nitrification at low pH by aggregated chemolithotrophic bacteria. Appl. Environ. Microbiol. 57:3600-3604.
-
(1991)
Appl. Environ. Microbiol.
, vol.57
, pp. 3600-3604
-
-
De Boer, W.1
Klein Gunnewiek, P.J.A.2
Veenhuis, M.3
Bock, E.4
Laanbroek, H.J.5
-
7
-
-
0029138062
-
Ammonium-oxidation by a chemolithotrophic bacterium belonging to the genus Nitrosospira
-
De Boer, W., P. J. A. Klein Gunnewiek, and H. J. Laanbroek. 1995. Ammonium-oxidation by a chemolithotrophic bacterium belonging to the genus Nitrosospira. Soil Biol. Biochem. 27:127-132.
-
(1995)
Soil Biol. Biochem.
, vol.27
, pp. 127-132
-
-
De Boer, W.1
Klein Gunnewiek, P.J.A.2
Laanbroek, H.J.3
-
8
-
-
0025366454
-
Genetic diversity in Sargasso Sea bacterioplankton
-
Giovannoni, S. J., T. B. Britschgi, C. L. Moyer, and K. G. Field. 1990. Genetic diversity in Sargasso Sea bacterioplankton. Nature 345:60-63.
-
(1990)
Nature
, vol.345
, pp. 60-63
-
-
Giovannoni, S.J.1
Britschgi, T.B.2
Moyer, C.L.3
Field, K.G.4
-
9
-
-
0024260490
-
An acidophilic and a neutrophilic Nitrobacter strain isolated from the numerically predominant nitrite-oxidizing population of an acid forest soil
-
Hankinson, T. R., and E. L. Schmidt. 1988. An acidophilic and a neutrophilic Nitrobacter strain isolated from the numerically predominant nitrite-oxidizing population of an acid forest soil. Appl. Environ. Microbiol. 54:1536-1540.
-
(1988)
Appl. Environ. Microbiol.
, vol.54
, pp. 1536-1540
-
-
Hankinson, T.R.1
Schmidt, E.L.2
-
10
-
-
0027184336
-
The phylogeny of autotrophic ammonia-oxidizing bacteria as determined by analysis of 16S ribosomal RNA gene sequences
-
Head, I. M., W. D. Hiorns, T. M. Embley, A. J. McCarthy, and J. R. Saunders. 1993. The phylogeny of autotrophic ammonia-oxidizing bacteria as determined by analysis of 16S ribosomal RNA gene sequences. J. Gen. Microbiol. 139:1147-1153.
-
(1993)
J. Gen. Microbiol.
, vol.139
, pp. 1147-1153
-
-
Head, I.M.1
Hiorns, W.D.2
Embley, T.M.3
McCarthy, A.J.4
Saunders, J.R.5
-
11
-
-
0028883636
-
Amplification of 16S ribosomal RNA genes of autotrophic ammonia-oxidising bacteria
-
Hiorns, W. D., R. C. Hastings, I. M. Head, A. J. McCarthy, J. R. Saunders, R. W. Pickup, and G. H. Hall. 1995. Amplification of 16S ribosomal RNA genes of autotrophic ammonia-oxidising bacteria. Microbiology 141:2793-2800.
-
(1995)
Microbiology
, vol.141
, pp. 2793-2800
-
-
Hiorns, W.D.1
Hastings, R.C.2
Head, I.M.3
McCarthy, A.J.4
Saunders, J.R.5
Pickup, R.W.6
Hall, G.H.7
-
12
-
-
0029669586
-
Comparative analysis of nitrifying bacteria associated with freshwater and marine aquariums
-
Hovanec, T. A., and E. F. Delong. 1996. Comparative analysis of nitrifying bacteria associated with freshwater and marine aquariums. Appl. Environ. Microbiol. 62:2888-2896.
-
(1996)
Appl. Environ. Microbiol.
, vol.62
, pp. 2888-2896
-
-
Hovanec, T.A.1
Delong, E.F.2
-
13
-
-
0000732090
-
Evolution of protein molecules
-
H. N. Munro (ed.), Academic Press, New York, N.Y.
-
Jukes, T. H., and C. R. Cantor. 1969. Evolution of protein molecules, p. 21-132. In H. N. Munro (ed.), Mammalian protein metabolism. Academic Press, New York, N.Y.
-
(1969)
Mammalian Protein Metabolism
, pp. 21-132
-
-
Jukes, T.H.1
Cantor, C.R.2
-
14
-
-
0001418558
-
Heterotrophic nitrification
-
J. I. Prosser (ed.), IRL Press, Oxford, United Kingdom
-
Killham, K. 1986. Heterotrophic nitrification, p. 117-126. In J. I. Prosser (ed.), Nitrification. IRL Press, Oxford, United Kingdom.
-
(1986)
Nitrification
, pp. 117-126
-
-
Killham, K.1
-
15
-
-
0030901922
-
Analysis of ammonia-oxidizing bacteria of the β subdivision of the class Proteobacteria in coastal sand dunes by denaturing gradient gel electrophoresis and sequencing of PCR-amplified 16S ribosomal DNA fragments
-
Kowalchuk, G. A., J. R. Stephen, W. De Boer, J. I. Prosser, T. M. Embley, and J. W. Woldendorp. 1997. Analysis of ammonia-oxidizing bacteria of the β subdivision of the class Proteobacteria in coastal sand dunes by denaturing gradient gel electrophoresis and sequencing of PCR-amplified 16S ribosomal DNA fragments. Appl. Environ. Microbiol. 63:1489-1497.
-
(1997)
Appl. Environ. Microbiol.
, vol.63
, pp. 1489-1497
-
-
Kowalchuk, G.A.1
Stephen, J.R.2
De Boer, W.3
Prosser, J.I.4
Embley, T.M.5
Woldendorp, J.W.6
-
16
-
-
0028170111
-
The ribosomal database project
-
Maidak, B. L., N. Larsen, J. McCaughey, R. Overbeek, G. J. Olsen, K. Fogel, J. Blandy, and C. R. Woese. 1994. The ribosomal database project. Nucleic Acids Res. 22:3485-3487.
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 3485-3487
-
-
Maidak, B.L.1
Larsen, N.2
McCaughey, J.3
Overbeek, R.4
Olsen, G.J.5
Fogel, K.6
Blandy, J.7
Woese, C.R.8
-
17
-
-
0028240270
-
Molecular analysis of enrichment cultures of marine ammonia oxidisers
-
McCaig, A. E., T. M. Embley, and J. I. Prosser. 1994. Molecular analysis of enrichment cultures of marine ammonia oxidisers. FEMS Microbiol. Lett. 120:363-368.
-
(1994)
FEMS Microbiol. Lett.
, vol.120
, pp. 363-368
-
-
McCaig, A.E.1
Embley, T.M.2
Prosser, J.I.3
-
18
-
-
0030001221
-
Phylogenetic probes for analyzing abundance and spatial organization of nitrifying bacteria
-
Mobarry, B. K., M. Wagner, V. Urbain, B. E. Rittmann, and D. A. Stahl. 1996. Phylogenetic probes for analyzing abundance and spatial organization of nitrifying bacteria. Appl. Environ. Microbiol. 62:2156-2162.
-
(1996)
Appl. Environ. Microbiol.
, vol.62
, pp. 2156-2162
-
-
Mobarry, B.K.1
Wagner, M.2
Urbain, V.3
Rittmann, B.E.4
Stahl, D.A.5
-
19
-
-
0027460328
-
Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA
-
Muyzer, G., E. C. De Waal and A. G. Uitterlinden. 1993. Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA. Appl. Environ. Microbiol. 59:695-700.
-
(1993)
Appl. Environ. Microbiol.
, vol.59
, pp. 695-700
-
-
Muyzer, G.1
De Waal, E.C.2
Uitterlinden, A.G.3
-
20
-
-
0027161934
-
Compilation of small ribosomal subunit RNA structures
-
Neefs, J.-M., Y. V. de Peer, P. D. Rijik, S. Chapelle, and R. D. Wachter. 1993. Compilation of small ribosomal subunit RNA structures. Nucleic Acids Res. 21:3025-3049.
-
(1993)
Nucleic Acids Res.
, vol.21
, pp. 3025-3049
-
-
Neefs, J.-M.1
De Peer, Y.V.2
Rijik, P.D.3
Chapelle, S.4
Wachter, R.D.5
-
22
-
-
0024822090
-
Autotrophic nitrification in bacteria
-
Prosser, J. I. 1989. Autotrophic nitrification in bacteria. Adv. Microbiol. Physiol. 30:125-181.
-
(1989)
Adv. Microbiol. Physiol.
, vol.30
, pp. 125-181
-
-
Prosser, J.I.1
-
23
-
-
0028165830
-
Group-specific 16S ribosomal-RNA hybridization probes to describe natural communities of methanogens
-
Raskin, L., J. M. Stromley, B. E. Rittmann, and D. A. Stahl. 1994. Group-specific 16S ribosomal-RNA hybridization probes to describe natural communities of methanogens. Appl. Environ. Microbiol. 60:1232-1240.
-
(1994)
Appl. Environ. Microbiol.
, vol.60
, pp. 1232-1240
-
-
Raskin, L.1
Stromley, J.M.2
Rittmann, B.E.3
Stahl, D.A.4
-
24
-
-
0023375195
-
The neighbor-joining method: A new method for reconstructing phylogenetic trees
-
Saitou, N., and M. Nei. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4:406-425.
-
(1987)
Mol. Biol. Evol.
, vol.4
, pp. 406-425
-
-
Saitou, N.1
Nei, M.2
-
25
-
-
0029851589
-
Denaturing gradient gel electrophoresis used to monitor the enrichment culture of aerobic chemoorganotrophic bacteria from a hot spring cyanobacterial mat
-
Santegoeds, C. M., S. C. Nold, and D. M. Ward. 1996. Denaturing gradient gel electrophoresis used to monitor the enrichment culture of aerobic chemoorganotrophic bacteria from a hot spring cyanobacterial mat. Appl. Environ. Microbiol. 62:3922-3928.
-
(1996)
Appl. Environ. Microbiol.
, vol.62
, pp. 3922-3928
-
-
Santegoeds, C.M.1
Nold, S.C.2
Ward, D.M.3
-
26
-
-
0029805297
-
Molecular diversity of soil and marine 16S rDNA sequences related to β-subgroup ammonia-oxidizing bacteria
-
Stephen, J. R., A. E. McCaig, Z. Smith, J. I. Prosser, and T. M. Embley. 1996. Molecular diversity of soil and marine 16S rDNA sequences related to β-subgroup ammonia-oxidizing bacteria. Appl. Environ. Microbiol. 62:4147-4154.
-
(1996)
Appl. Environ. Microbiol.
, vol.62
, pp. 4147-4154
-
-
Stephen, J.R.1
McCaig, A.E.2
Smith, Z.3
Prosser, J.I.4
Embley, T.M.5
-
27
-
-
0345031241
-
-
ARB. Computer program distributed by the Technical University Munich, Munich, Germany
-
Strunk, O., and W. Ludwig. ARB. Computer program distributed by the Technical University Munich, Munich, Germany.
-
-
-
Strunk, O.1
Ludwig, W.2
-
28
-
-
0030040940
-
Phylogenetic analysis of seven new isolates of ammonia-oxidising bacteria based on 16S rRNA gene sequences
-
Utåker, J. B., L. Bakken, Q. Q. Jiang, and I. F. Nes. 1996. Phylogenetic analysis of seven new isolates of ammonia-oxidising bacteria based on 16S rRNA gene sequences. Syst. Appl. Microbiol. 18:549-559.
-
(1996)
Syst. Appl. Microbiol.
, vol.18
, pp. 549-559
-
-
Utåker, J.B.1
Bakken, L.2
Jiang, Q.Q.3
Nes, I.F.4
-
29
-
-
0028916453
-
Detection of ammonium-oxidizing bacteria in the beta-subclass of the class Proteobacteria in aquatic samples with the PCR
-
Voytek, M. A., and B. B. Ward. 1995. Detection of ammonium-oxidizing bacteria in the beta-subclass of the class Proteobacteria in aquatic samples with the PCR. Appl. Environ. Microbiol. 61:1444-1450.
-
(1995)
Appl. Environ. Microbiol.
, vol.61
, pp. 1444-1450
-
-
Voytek, M.A.1
Ward, B.B.2
-
30
-
-
0021736835
-
The phylogeny of the purple bacteria: The beta subdivision
-
Woese, C. R., W. G. Weisburg, B. J. Paster, C. M. Hahn, R. S. Tanner, N. R. Krieg, H.-P. Koops, H. Harms, and E. Stackebrandt. 1984. The phylogeny of the purple bacteria: the beta subdivision. Syst. Appl. Microbiol. 5:327-336.
-
(1984)
Syst. Appl. Microbiol.
, vol.5
, pp. 327-336
-
-
Woese, C.R.1
Weisburg, W.G.2
Paster, B.J.3
Hahn, C.M.4
Tanner, R.S.5
Krieg, N.R.6
Koops, H.-P.7
Harms, H.8
Stackebrandt, E.9
-
31
-
-
0021879782
-
The phylogeny of the purple bacteria: The gamma subdivision
-
Woese, C. R., W. G. Weisburg, C. M. Hahn, B. J. Paster, L. B. Zahlen, B. J. Lewis, T. J. Macke, W. Ludwig, and E. Stackebrandt. 1985. The phylogeny of the purple bacteria: the gamma subdivision. Syst. Appl. Microbiol. 6:25-33.
-
(1985)
Syst. Appl. Microbiol.
, vol.6
, pp. 25-33
-
-
Woese, C.R.1
Weisburg, W.G.2
Hahn, C.M.3
Paster, B.J.4
Zahlen, L.B.5
Lewis, B.J.6
Macke, T.J.7
Ludwig, W.8
Stackebrandt, E.9
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