메뉴 건너뛰기




Volumn 45, Issue 11, 2011, Pages 1411-1418

RT-qPCR study on post-mortem brain samples from patients with major psychiatric disorders: Reference genes and specimen characteristics

Author keywords

Bipolar disorder; Major depressive disorder; Post mortem human brain; Reference genes; RNA quality indicator; Schizophrenia

Indexed keywords

GLYCERALDEHYDE 3 PHOSPHATE DEHYDROGENASE; MESSENGER RNA; RIBOSOME PROTEIN; RNA; RPL30 PROTEIN; RPLP0 PROTEIN; RPS17 PROTEIN; TRANSFERRIN RECEPTOR; UNCLASSIFIED DRUG;

EID: 80053949333     PISSN: 00223956     EISSN: 18791379     Source Type: Journal    
DOI: 10.1016/j.jpsychires.2011.06.001     Document Type: Article
Times cited : (18)

References (31)
  • 1
    • 3442876969 scopus 로고    scopus 로고
    • Normalization of real-time quantitative reverse transcription-PCR data: a model-based variance estimation approach to identify genes suited for normalization, applied to bladder and colon cancer data sets
    • Andersen C.L., Jensen J.L., Orntoft T.F. Normalization of real-time quantitative reverse transcription-PCR data: a model-based variance estimation approach to identify genes suited for normalization, applied to bladder and colon cancer data sets. Cancer Research 2004, 64:5245-5250.
    • (2004) Cancer Research , vol.64 , pp. 5245-5250
    • Andersen, C.L.1    Jensen, J.L.2    Orntoft, T.F.3
  • 3
    • 56649111125 scopus 로고    scopus 로고
    • Neuroanatomical pattern of mitochondrial complex I pathology varies between schizophrenia, bipolar disorder and major depression
    • Ben-Shachar D., Karry R. Neuroanatomical pattern of mitochondrial complex I pathology varies between schizophrenia, bipolar disorder and major depression. PloS One 2008, 3:e3676.
    • (2008) PloS One , vol.3
    • Ben-Shachar, D.1    Karry, R.2
  • 4
    • 84855658806 scopus 로고    scopus 로고
    • Postmortem interval effect on RNA and gene expression in human brain tissue
    • [Epub ahead of print]
    • Birdsill A.C., Walker D.G., Lue L., Sue L.I., Beach T.G. Postmortem interval effect on RNA and gene expression in human brain tissue. Cell and Tissue Banking 2010 Aug 12, [Epub ahead of print].
    • (2010) Cell and Tissue Banking
    • Birdsill, A.C.1    Walker, D.G.2    Lue, L.3    Sue, L.I.4    Beach, T.G.5
  • 5
    • 49049110785 scopus 로고    scopus 로고
    • Gene expression in the etiology of schizophrenia
    • Bray N.J. Gene expression in the etiology of schizophrenia. Schizophrenia Bulletin 2008, 34:412-418.
    • (2008) Schizophrenia Bulletin , vol.34 , pp. 412-418
    • Bray, N.J.1
  • 6
    • 64149097786 scopus 로고    scopus 로고
    • The MIQE guidelines: minimum information for publication of quantitative real-time PCR experiments
    • Bustin S.A., Benes V., Garson J.A., Hellemans J., Huggett J., Kubista M., et al. The MIQE guidelines: minimum information for publication of quantitative real-time PCR experiments. Clinical Chemistry 2009, 55:611-622.
    • (2009) Clinical Chemistry , vol.55 , pp. 611-622
    • Bustin, S.A.1    Benes, V.2    Garson, J.A.3    Hellemans, J.4    Huggett, J.5    Kubista, M.6
  • 7
    • 0038516240 scopus 로고    scopus 로고
    • Two-dimensional assessment of cytoarchitecture in the anterior cingulate cortex in major depressive disorder, bipolar disorder, and schizophrenia: evidence for decreased neuronal somal size and increased neuronal density
    • Chana G., Landau S., Beasley C., Everall I.P., Cotter D. Two-dimensional assessment of cytoarchitecture in the anterior cingulate cortex in major depressive disorder, bipolar disorder, and schizophrenia: evidence for decreased neuronal somal size and increased neuronal density. Biological Psychiatry 2003, 53:1086-1098.
    • (2003) Biological Psychiatry , vol.53 , pp. 1086-1098
    • Chana, G.1    Landau, S.2    Beasley, C.3    Everall, I.P.4    Cotter, D.5
  • 9
    • 33644975004 scopus 로고    scopus 로고
    • RNA integrity and the effect on the real-time qRT-PCR performance
    • Fleige S., Pfaffl M.W. RNA integrity and the effect on the real-time qRT-PCR performance. Molecular Aspects of Medicine 2006, 27:126-139.
    • (2006) Molecular Aspects of Medicine , vol.27 , pp. 126-139
    • Fleige, S.1    Pfaffl, M.W.2
  • 10
    • 77954510735 scopus 로고    scopus 로고
    • The bipolar disorder risk allele at CACNA1C also confers risk of recurrent major depression and of schizophrenia
    • Green E.K., Grozeva D., Jones I., Jones L., Kirov G., Caesar S., et al. The bipolar disorder risk allele at CACNA1C also confers risk of recurrent major depression and of schizophrenia. Molecular Psychiatry 2010, 15:1016-1022.
    • (2010) Molecular Psychiatry , vol.15 , pp. 1016-1022
    • Green, E.K.1    Grozeva, D.2    Jones, I.3    Jones, L.4    Kirov, G.5    Caesar, S.6
  • 11
    • 0034054736 scopus 로고    scopus 로고
    • Disease-specific alterations in frontal cortex brain proteins in schizophrenia, bipolar disorder, and major depressive disorder. The Stanley neuropathology consortium
    • Johnston-Wilson N.L., Sims C.D., Hofmann J.P., Anderson L., Shore A.D., Torrey E.F., et al. Disease-specific alterations in frontal cortex brain proteins in schizophrenia, bipolar disorder, and major depressive disorder. The Stanley neuropathology consortium. Molecular Psychiatry 2000, 5:142-149.
    • (2000) Molecular Psychiatry , vol.5 , pp. 142-149
    • Johnston-Wilson, N.L.1    Sims, C.D.2    Hofmann, J.P.3    Anderson, L.4    Shore, A.D.5    Torrey, E.F.6
  • 12
    • 23444444014 scopus 로고    scopus 로고
    • Variations in differential gene expression patterns across multiple brain regions in schizophrenia
    • Katsel P., Davis K.L., Gorman J.M., Haroutunian V. Variations in differential gene expression patterns across multiple brain regions in schizophrenia. Schizophrenia Research 2005, 77:241-252.
    • (2005) Schizophrenia Research , vol.77 , pp. 241-252
    • Katsel, P.1    Davis, K.L.2    Gorman, J.M.3    Haroutunian, V.4
  • 13
    • 71449105010 scopus 로고    scopus 로고
    • A cytogenetic abnormality and rare coding variants identify ABCA13 as a candidate gene in schizophrenia, bipolar disorder, and depression
    • Knight H.M., Pickard B.S., Maclean A., Malloy M.P., Soares D.C., McRae A.F., et al. A cytogenetic abnormality and rare coding variants identify ABCA13 as a candidate gene in schizophrenia, bipolar disorder, and depression. American Journal of Human Genetics 2009, 85:833-846.
    • (2009) American Journal of Human Genetics , vol.85 , pp. 833-846
    • Knight, H.M.1    Pickard, B.S.2    Maclean, A.3    Malloy, M.P.4    Soares, D.C.5    McRae, A.F.6
  • 16
    • 79551688322 scopus 로고    scopus 로고
    • CTLA-4 confers a risk of recurrent schizophrenia, major depressive disorder and bipolar disorder in the Chinese Han population
    • Liu J., Li J., Li T., Wang T., Li Y., Zeng Z., et al. CTLA-4 confers a risk of recurrent schizophrenia, major depressive disorder and bipolar disorder in the Chinese Han population. Brain, Behavior, and Immunity 2011, 25:429-433.
    • (2011) Brain, Behavior, and Immunity , vol.25 , pp. 429-433
    • Liu, J.1    Li, J.2    Li, T.3    Wang, T.4    Li, Y.5    Zeng, Z.6
  • 17
    • 0035710746 scopus 로고    scopus 로고
    • Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) method
    • Livak K.J., Schmittgen T.D. Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) method. Methods 2001, 25:402-408.
    • (2001) Methods , vol.25 , pp. 402-408
    • Livak, K.J.1    Schmittgen, T.D.2
  • 18
    • 0036176676 scopus 로고    scopus 로고
    • Striatal excitatory amino acid transporter transcript expression in schizophrenia, bipolar disorder, and major depressive disorder
    • McCullumsmith R.E., Meador-Woodruff J.H. Striatal excitatory amino acid transporter transcript expression in schizophrenia, bipolar disorder, and major depressive disorder. Neuropsychopharmacology 2002, 26:368-375.
    • (2002) Neuropsychopharmacology , vol.26 , pp. 368-375
    • McCullumsmith, R.E.1    Meador-Woodruff, J.H.2
  • 19
    • 33746720828 scopus 로고    scopus 로고
    • Brain pH has a significant impact on human postmortem hippocampal gene expression profiles
    • Mexal S., Berger R., Adams C.E., Ross R.G., Freedman R., Leonard S. Brain pH has a significant impact on human postmortem hippocampal gene expression profiles. Brain Research 2006, 1106:1-11.
    • (2006) Brain Research , vol.1106 , pp. 1-11
    • Mexal, S.1    Berger, R.2    Adams, C.E.3    Ross, R.G.4    Freedman, R.5    Leonard, S.6
  • 20
    • 44449179296 scopus 로고    scopus 로고
    • A psychoneuroimmunological perspective to Emil Kraepelins dichotomy: schizophrenia and major depression as inflammatory CNS disorders
    • Muller N., Schwarz M.J. A psychoneuroimmunological perspective to Emil Kraepelins dichotomy: schizophrenia and major depression as inflammatory CNS disorders. European Archives of Psychiatry and Clinical Neuroscience 2008, 258(Suppl. 2):97-106.
    • (2008) European Archives of Psychiatry and Clinical Neuroscience , vol.258 , Issue.SUPPL. 2 , pp. 97-106
    • Muller, N.1    Schwarz, M.J.2
  • 21
    • 40949121863 scopus 로고    scopus 로고
    • Exploring the borders of the schizoaffective spectrum: a categorical and dimensional approach
    • Peralta V., Cuesta M.J. Exploring the borders of the schizoaffective spectrum: a categorical and dimensional approach. Journal of Affective Disorders 2008, 108:71-86.
    • (2008) Journal of Affective Disorders , vol.108 , pp. 71-86
    • Peralta, V.1    Cuesta, M.J.2
  • 22
    • 78650936471 scopus 로고    scopus 로고
    • Differential regional N-acetylaspartate deficits in postmortem brain in schizophrenia, bipolar disorder and major depressive disorder
    • Reynolds L.M., Reynolds G.P. Differential regional N-acetylaspartate deficits in postmortem brain in schizophrenia, bipolar disorder and major depressive disorder. Journal of Psychiatric Research 2011, 45:54-59.
    • (2011) Journal of Psychiatric Research , vol.45 , pp. 54-59
    • Reynolds, L.M.1    Reynolds, G.P.2
  • 23
    • 62849119061 scopus 로고    scopus 로고
    • Mitochondrial variants in schizophrenia, bipolar disorder, and major depressive disorder
    • Rollins B., Martin M.V., Sequeira P.A., Moon E.A., Morgan L.Z., Watson S.J., et al. Mitochondrial variants in schizophrenia, bipolar disorder, and major depressive disorder. PloS One 2009, 4:e4913.
    • (2009) PloS One , vol.4
    • Rollins, B.1    Martin, M.V.2    Sequeira, P.A.3    Moon, E.A.4    Morgan, L.Z.5    Watson, S.J.6
  • 24
    • 67449149671 scopus 로고    scopus 로고
    • Detection of stable reference genes for real-time PCR analysis in schizophrenia and bipolar disorder
    • Silberberg G., Baruch K., Navon R. Detection of stable reference genes for real-time PCR analysis in schizophrenia and bipolar disorder. Analytical Biochemistry 2009, 391:91-97.
    • (2009) Analytical Biochemistry , vol.391 , pp. 91-97
    • Silberberg, G.1    Baruch, K.2    Navon, R.3
  • 25
    • 10744228401 scopus 로고    scopus 로고
    • Effect of agonal and postmortem factors on gene expression profile: quality control in microarray analyses of postmortem human brain
    • Tomita H., Vawter M.P., Walsh D.M., Evans S.J., Choudary P.V., Li J., et al. Effect of agonal and postmortem factors on gene expression profile: quality control in microarray analyses of postmortem human brain. Biological Psychiatry 2004, 55:346-352.
    • (2004) Biological Psychiatry , vol.55 , pp. 346-352
    • Tomita, H.1    Vawter, M.P.2    Walsh, D.M.3    Evans, S.J.4    Choudary, P.V.5    Li, J.6
  • 28
    • 0037129827 scopus 로고    scopus 로고
    • Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes
    • RESEARCH0034
    • Vandesompele J., De Preter K., Pattyn F., Poppe B., Van Roy N., De Paepe A., et al. Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes. Genome Biology 2002, 3. RESEARCH0034.
    • (2002) Genome Biology , vol.3
    • Vandesompele, J.1    De Preter, K.2    Pattyn, F.3    Poppe, B.4    Van Roy, N.5    De Paepe, A.6
  • 29
    • 43249099500 scopus 로고    scopus 로고
    • Twenty-five years of quantitative PCR for gene expression analysis
    • VanGuilder H.D., Vrana K.E., Freeman W.M. Twenty-five years of quantitative PCR for gene expression analysis. BioTechniques 2008, 44:619-626.
    • (2008) BioTechniques , vol.44 , pp. 619-626
    • VanGuilder, H.D.1    Vrana, K.E.2    Freeman, W.M.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.