메뉴 건너뛰기




Volumn 745, Issue , 2011, Pages 499-522

Tracking of Single and Multiple Genomic Loci in Living Yeast Cells

Author keywords

chromosome dynamics; DNA; fluorescent proteins; LacO; live cell microscopy; nuclear organization; Saccharomyces cerevisiae; TetO

Indexed keywords

ARTICLE; CONFOCAL MICROSCOPY; FLUORESCENCE MICROSCOPY; FUNGAL GENOME; GENETICS; POLYMERASE CHAIN REACTION; SACCHAROMYCES CEREVISIAE;

EID: 80053337360     PISSN: 10643745     EISSN: 19406029     Source Type: Book Series    
DOI: 10.1007/978-1-61779-129-1_29     Document Type: Chapter
Times cited : (15)

References (39)
  • 1
    • 0035371920 scopus 로고    scopus 로고
    • Visualizing chromosome dynamics with GFP
    • Belmont, A.S. (2001) Visualizing chromosome dynamics with GFP. Trends Cell Biol 11, 250–257.
    • (2001) Trends Cell Biol , vol.11 , pp. 250-257
    • Belmont, A.S.1
  • 2
    • 0032030657 scopus 로고    scopus 로고
    • In vivo visualization of chromosomes using lac operator-repressor binding
    • Belmont, A.S., and Straight, A.F. (1998) In vivo visualization of chromosomes using lac operator-repressor binding. Trends Cell Biol 8, 121–124.
    • (1998) Trends Cell Biol , vol.8 , pp. 121-124
    • Belmont, A.S.1    Straight, A.F.2
  • 4
    • 0030885925 scopus 로고    scopus 로고
    • Cohesins: Chromosomal proteins that prevent premature separation of sister chromatids
    • Michaelis, C., Ciosk, R., and Nasmyth, K. (1997) Cohesins: chromosomal proteins that prevent premature separation of sister chromatids. Cell 91, 35–45.
    • (1997) Cell , vol.91 , pp. 35-45
    • Michaelis, C.1    Ciosk, R.2    Nasmyth, K.3
  • 5
    • 0030474371 scopus 로고    scopus 로고
    • GFP tagging of budding yeast chromosomes reveals that protein–protein interactions can mediate sister chromatid cohesion
    • Straight, A.F., Belmont, A.S., Robinett, C.C., and Murray, A.W. (1996) GFP tagging of budding yeast chromosomes reveals that protein–protein interactions can mediate sister chromatid cohesion. Curr Biol 6, 1599–1608.
    • (1996) Curr Biol , vol.6 , pp. 1599-1608
    • Straight, A.F.1    Belmont, A.S.2    Robinett, C.C.3    Murray, A.W.4
  • 6
    • 36849008181 scopus 로고    scopus 로고
    • Telomere anchoring at the nuclear periphery requires the budding yeast Sad1-UNC-84 domain protein Mps3
    • Bupp, J.M., Martin, A.E., Stensrud, E.S., and Jaspersen, S.L. (2007) Telomere anchoring at the nuclear periphery requires the budding yeast Sad1-UNC-84 domain protein Mps3. J Cell Biol 179, 845–854.
    • (2007) J Cell Biol , vol.179 , pp. 845-854
    • Bupp, J.M.1    Martin, A.E.2    Stensrud, E.S.3    Jaspersen, S.L.4
  • 8
    • 57749122172 scopus 로고    scopus 로고
    • Release of yeast telomeres from the nuclear periphery is triggered by replication and maintained by suppression of Ku-mediated anchoring
    • Ebrahimi, H., and Donaldson, A.D. (2008) Release of yeast telomeres from the nuclear periphery is triggered by replication and maintained by suppression of Ku-mediated anchoring. Genes Dev 22, 3363–3374.
    • (2008) Genes Dev , vol.22 , pp. 3363-3374
    • Ebrahimi, H.1    Donaldson, A.D.2
  • 9
    • 67149111884 scopus 로고    scopus 로고
    • Yeast silent mating type loci form heterochromatic clusters through silencer protein-dependent long-range interactions
    • Miele, A., Bystricky, K., and Dekker, J. (2009) Yeast silent mating type loci form heterochromatic clusters through silencer protein-dependent long-range interactions. PLoS Genet 5, e1000478.
    • (2009) Plos Genet , vol.5
    • Miele, A.1    Bystricky, K.2    Dekker, J.3
  • 11
    • 1942503933 scopus 로고    scopus 로고
    • Separation of silencing from perinuclear anchoring functions in yeast Ku80, Sir4 and Esc1 proteins
    • Taddei, A., Hediger, F., Neumann, F.R., Bauer, C., and Gasser, S.M. (2004) Separation of silencing from perinuclear anchoring functions in yeast Ku80, Sir4 and Esc1 proteins. EMBO J 23, 1301–1312.
    • (2004) EMBO J , vol.23 , pp. 1301-1312
    • Taddei, A.1    Hediger, F.2    Neumann, F.R.3    Bauer, C.4    Gasser, S.M.5
  • 15
    • 33744977019 scopus 로고    scopus 로고
    • Nuclear pore association confers optimal expression levels for an inducible yeast gene
    • Taddei, A., Van Houwe, G., Hediger, F., Kalck, V., Cubizolles, F., Schober, H., and Gasser, S.M. (2006) Nuclear pore association confers optimal expression levels for an inducible yeast gene. Nature 441, 774–778.
    • (2006) Nature , vol.441 , pp. 774-778
    • Taddei, A.1    van Houwe, G.2    Hediger, F.3    Kalck, V.4    Cubizolles, F.5    Schober, H.6    Gasser, S.M.7
  • 16
    • 11144296359 scopus 로고    scopus 로고
    • Sir-mediated repression can occur independently of chromosomal and subnuclear contexts
    • Gartenberg, M.R., Neumann, F.R., Laroche, T., Blaszczyk, M., and Gasser, S.M. (2004) Sir-mediated repression can occur independently of chromosomal and subnuclear contexts. Cell 119, 955–967.
    • (2004) Cell , vol.119 , pp. 955-967
    • Gartenberg, M.R.1    Neumann, F.R.2    Laroche, T.3    Blaszczyk, M.4    Gasser, S.M.5
  • 17
    • 0035824395 scopus 로고    scopus 로고
    • Chromosome dynamics in the yeast interphase nucleus
    • Heun, P., Laroche, T., Shimada, K., Furrer, P., and Gasser, S.M. (2001) Chromosome dynamics in the yeast interphase nucleus. Science 294, 2181–2186.
    • (2001) Science , vol.294 , pp. 2181-2186
    • Heun, P.1    Laroche, T.2    Shimada, K.3    Furrer, P.4    Gasser, S.M.5
  • 18
    • 0842331349 scopus 로고    scopus 로고
    • Mating type-dependent constraints on the mobility of the left arm of yeast chromosome III
    • Bressan, D.A., Vazquez, J., and Haber, J.E. (2004) Mating type-dependent constraints on the mobility of the left arm of yeast chromosome III. J Cell Biol 164, 361–371.
    • (2004) J Cell Biol , vol.164 , pp. 361-371
    • Bressan, D.A.1    Vazquez, J.2    Haber, J.E.3
  • 19
    • 59249101747 scopus 로고    scopus 로고
    • Regulation of nuclear positioning and dynamics of the silent mating type loci by the yeast Ku70/Ku80 complex
    • Bystricky, K., Van Attikum, H., Montiel, M.D., Dion, V., Gehlen, L., and Gasser, S.M. (2009) Regulation of nuclear positioning and dynamics of the silent mating type loci by the yeast Ku70/Ku80 complex. Mol Cell Biol 29, 835–848.
    • (2009) Mol Cell Biol , vol.29 , pp. 835-848
    • Bystricky, K.1    van Attikum, H.2    Montiel, M.D.3    Dion, V.4    Gehlen, L.5    Gasser, S.M.6
  • 20
    • 33745712582 scopus 로고    scopus 로고
    • The dynamics of homologous pairing during mating type interconversion in budding yeast
    • Houston, P.L., and Broach, J.R. (2006) The dynamics of homologous pairing during mating type interconversion in budding yeast. PLoS Genet 2, e98.
    • (2006) Plos Genet , vol.2 , pp. e98
    • Houston, P.L.1    Broach, J.R.2
  • 21
    • 0036566327 scopus 로고    scopus 로고
    • Directional bias during mating type switching in Saccharomyces is independent of chromosomal architecture
    • Simon, P., Houston, P., and Broach, J. (2002) Directional bias during mating type switching in Saccharomyces is independent of chromosomal architecture. EMBO J 21, 2282–2291.
    • (2002) EMBO J , vol.21 , pp. 2282-2291
    • Simon, P.1    Houston, P.2    Broach, J.3
  • 23
    • 9344239339 scopus 로고    scopus 로고
    • Long-range compaction and flexibility of interphase chromatin in budding yeast analyzed by high-resolution imaging techniques
    • Bystricky, K., Heun, P., Gehlen, L., Langowski, J., and Gasser, S.M. (2004) Long-range compaction and flexibility of interphase chromatin in budding yeast analyzed by high-resolution imaging techniques. Proc Natl Acad Sci USA 101, 16495–16500.
    • (2004) Proc Natl Acad Sci USA , vol.101 , pp. 16495-16500
    • Bystricky, K.1    Heun, P.2    Gehlen, L.3    Langowski, J.4    Gasser, S.M.5
  • 24
    • 76649101456 scopus 로고    scopus 로고
    • Chromosome arm length and nuclear constraints determine the dynamic relationship of yeast subtelomeres
    • Therizols, P., Duong, T., Dujon, B., Zimmer, C., and Fabre, E. (2010) Chromosome arm length and nuclear constraints determine the dynamic relationship of yeast subtelomeres. Proc Natl Acad Sci USA 107, 2025–2030.
    • (2010) Proc Natl Acad Sci USA , vol.107 , pp. 2025-2030
    • Therizols, P.1    Duong, T.2    Dujon, B.3    Zimmer, C.4    Fabre, E.5
  • 25
    • 12344331897 scopus 로고    scopus 로고
    • A cis-acting sequence involved in chromosome segregation in Escherichia coli
    • Fekete, R.A., and Chattoraj, D.K. (2005) A cis-acting sequence involved in chromosome segregation in Escherichia coli. Mol Microbiol 55, 175–183.
    • (2005) Mol Microbiol , vol.55 , pp. 175-183
    • Fekete, R.A.1    Chattoraj, D.K.2
  • 26
    • 41549103314 scopus 로고    scopus 로고
    • Modules for cloning-free chromatin tagging in Saccharomyces cerevisiae
    • Rohner, S., Gasser, S.M., and Meister, P. (2008) Modules for cloning-free chromatin tagging in Saccharomyces cerevisiae. Yeast 25, 235–239.
    • (2008) Yeast , vol.25 , pp. 235-239
    • Rohner, S.1    Gasser, S.M.2    Meister, P.3
  • 27
  • 29
    • 0035931758 scopus 로고    scopus 로고
    • The positioning and dynamics of origins of replication in the budding yeast nucleus
    • Heun, P., Laroche, T., Raghuraman, M.K., and Gasser, S.M. (2001) The positioning and dynamics of origins of replication in the budding yeast nucleus. J Cell Biol 152, 385–400.
    • (2001) J Cell Biol , vol.152 , pp. 385-400
    • Heun, P.1    Laroche, T.2    Raghuraman, M.K.3    Gasser, S.M.4
  • 31
    • 4043090758 scopus 로고    scopus 로고
    • Optical sectioning deep inside live embryos by selective plane illumination microscopy
    • Huisken, J., Swoger, J., Del Bene, F., Wittbrodt, J., and Stelzer, E.H. (2004) Optical sectioning deep inside live embryos by selective plane illumination microscopy. Science 305, 1007–1009.
    • (2004) Science , vol.305 , pp. 1007-1009
    • Huisken, J.1    Swoger, J.2    Del Bene, F.3    Wittbrodt, J.4    Stelzer, E.H.5
  • 32
    • 70350433419 scopus 로고    scopus 로고
    • Lab-on-Chip for fast 3D particle tracking in living cells
    • Hajjoul, H., Kocanova, S., Lassadi, I., Bystricky, K., and Bancaud, A. (2009) Lab-on-Chip for fast 3D particle tracking in living cells. Lab Chip 9, 3054–3058.
    • (2009) Lab Chip , vol.9 , pp. 3054-3058
    • Hajjoul, H.1    Kocanova, S.2    Lassadi, I.3    Bystricky, K.4    Bancaud, A.5
  • 33
    • 1642494589 scopus 로고    scopus 로고
    • Methods for visualizing chromatin dynamics in living yeast
    • Hediger, F., Taddei, A., Neumann, F.R., and Gasser, S.M. (2004) Methods for visualizing chromatin dynamics in living yeast. Methods Enzymol 375, 345–365.
    • (2004) Methods Enzymol , vol.375 , pp. 345-365
    • Hediger, F.1    Taddei, A.2    Neumann, F.R.3    Gasser, S.M.4
  • 34
    • 77956039091 scopus 로고    scopus 로고
    • Visualizing yeast chromosomes and nuclear architecture. Methods enzymology, Guide to yeast genetics, J. Abelson and M. Simon
    • New York, NY: Academic Press
    • Meister, P., Gehlen, L.R., Varela, E., Kalck, V., and Gasser, S.M. (2010) Visualizing yeast chromosomes and nuclear architecture. Methods enzymology, Guide to yeast genetics, J. Abelson and M. Simon, eds.,Vol. 470 (New York, NY: Academic Press), 535–567.
    • (2010) Eds , vol.470 , pp. 535-567
    • Meister, P.1    Gehlen, L.R.2    Varela, E.3    Kalck, V.4    Gasser, S.M.5
  • 35
    • 26444477373 scopus 로고    scopus 로고
    • Automatic tracking of individual fluorescence particles: Application to the study of chromosome dynamics
    • Sage, D., Neumann, F.R., Hediger, F., Gasser, S.M., and Unser, M. (2005) Automatic tracking of individual fluorescence particles: application to the study of chromosome dynamics. IEEE Trans Image Process 14, 1372–1383.
    • (2005) IEEE Trans Image Process , vol.14 , pp. 1372-1383
    • Sage, D.1    Neumann, F.R.2    Hediger, F.3    Gasser, S.M.4    Unser, M.5
  • 36
    • 0035928736 scopus 로고    scopus 로고
    • Multiple regimes of constrained chromosome motion are regulated in the interphase Drosophila nucleus
    • Vazquez, J., Belmont, A.S., and Sedat, J.W. (2001) Multiple regimes of constrained chromosome motion are regulated in the interphase Drosophila nucleus. Curr Biol 11, 1227–1239.
    • (2001) Curr Biol , vol.11 , pp. 1227-1239
    • Vazquez, J.1    Belmont, A.S.2    Sedat, J.W.3
  • 37
    • 77949610048 scopus 로고    scopus 로고
    • NEMO: A tool for analyzing gene and chromosome territory distributions from 3D-FISH experiments
    • Iannuccelli, E., Mompart, F., Gellin, J., Lahbib-Mansais, Y., Yerle, M., and Boudier, T. (2010) NEMO: a tool for analyzing gene and chromosome territory distributions from 3D-FISH experiments. Bioinformatics 26, 696–697.
    • (2010) Bioinformatics , vol.26 , pp. 696-697
    • Iannuccelli, E.1    Mompart, F.2    Gellin, J.3    Lahbib-Mansais, Y.4    Yerle, M.5    Boudier, T.6
  • 38
    • 0021668558 scopus 로고
    • ′-phosphate decarboxy-lase activity in yeast: 5-fluoro-orotic acid resistance
    • ′-phosphate decarboxy-lase activity in yeast: 5-fluoro-orotic acid resistance. Mol Gen Genet 197, 345–346.
    • (1984) Mol Gen Genet , vol.197 , pp. 345-346
    • Boeke, J.D.1    Lacroute, F.2    Fink, G.R.3
  • 39
    • 0028921834 scopus 로고
    • Improved green fluorescence
    • Heim, R., Cubitt, A.B., and Tsien, R.Y. (1995) Improved green fluorescence. Nature 373, 663–664.
    • (1995) Nature , vol.373 , pp. 663-664
    • Heim, R.1    Cubitt, A.B.2    Tsien, R.Y.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.