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Volumn 18, Issue 2, 2008, Pages 261-271

Controlled exchange of chromosomal arms reveals principles driving telomere interactions in yeast

Author keywords

[No Author keywords available]

Indexed keywords

RAP1 PROTEIN;

EID: 39049159775     PISSN: 10889051     EISSN: 15495469     Source Type: Journal    
DOI: 10.1101/gr.6687808     Document Type: Article
Times cited : (67)

References (51)
  • 1
    • 0032490917 scopus 로고    scopus 로고
    • Perinuclear localization of chromatin facilitates transcriptional silencing
    • Andrulis, E.D., Neiman, A.M., Zappulla, D.C., and Sternglanz, R. 1998. Perinuclear localization of chromatin facilitates transcriptional silencing. Nature 394: 592-595.
    • (1998) Nature , vol.394 , pp. 592-595
    • Andrulis, E.D.1    Neiman, A.M.2    Zappulla, D.C.3    Sternglanz, R.4
  • 3
    • 9344239339 scopus 로고    scopus 로고
    • Long-range compaction and flexibility of interphase chromatin in budding yeast analyzed by high-resolution imaging techniques
    • Bystricky, K., Heun, P., Gehlen, L., Langowski, J., and Gasser, S.M. 2004. Long-range compaction and flexibility of interphase chromatin in budding yeast analyzed by high-resolution imaging techniques. Proc. Natl. Acad. Sci. 101: 16495-16500.
    • (2004) Proc. Natl. Acad. Sci , vol.101 , pp. 16495-16500
    • Bystricky, K.1    Heun, P.2    Gehlen, L.3    Langowski, J.4    Gasser, S.M.5
  • 4
    • 13444257509 scopus 로고    scopus 로고
    • Chromosome looping in yeast: Telomere pairing and coordinated movement reflect anchoring efficiency and territorial organization
    • Bystricky, K., Laroche, T., van Houwe, G., Blaszczyk, M., and Gasser, S.M. 2005. Chromosome looping in yeast: Telomere pairing and coordinated movement reflect anchoring efficiency and territorial organization. J. Cell Biol. 168: 375-387.
    • (2005) J. Cell Biol , vol.168 , pp. 375-387
    • Bystricky, K.1    Laroche, T.2    van Houwe, G.3    Blaszczyk, M.4    Gasser, S.M.5
  • 5
    • 33846599196 scopus 로고    scopus 로고
    • Chromatin looping mediates boundary element promoter interactions
    • Celniker, S.E. and Drewell, R.A. 2007. Chromatin looping mediates boundary element promoter interactions. Bioessays 29: 7-10.
    • (2007) Bioessays , vol.29 , pp. 7-10
    • Celniker, S.E.1    Drewell, R.A.2
  • 6
    • 0020621223 scopus 로고
    • Organization of DNA sequences and replication origins at yeast telomeres
    • Chan, C.S. and Tye, B.K. 1983. Organization of DNA sequences and replication origins at yeast telomeres. Cell 33: 563-573.
    • (1983) Cell , vol.33 , pp. 563-573
    • Chan, C.S.1    Tye, B.K.2
  • 7
    • 0035316574 scopus 로고    scopus 로고
    • Chromosome territories, nuclear architecture and gene regulation in mammalian cells
    • Cremer, T. and Cremer, C. 2001. Chromosome territories, nuclear architecture and gene regulation in mammalian cells. Nat. Rev. Genet. 2: 292-301.
    • (2001) Nat. Rev. Genet , vol.2 , pp. 292-301
    • Cremer, T.1    Cremer, C.2
  • 8
    • 0037083376 scopus 로고    scopus 로고
    • Capturing chromosome conformation
    • Dekker, J., Rippe, K., Dekker, M., and Kleckner, N. 2002. Capturing chromosome conformation. Science 295: 1306-1311.
    • (2002) Science , vol.295 , pp. 1306-1311
    • Dekker, J.1    Rippe, K.2    Dekker, M.3    Kleckner, N.4
  • 10
    • 16344393340 scopus 로고    scopus 로고
    • Comparative genomics in hemiascomycete yeasts: Evolution of sex, silencing, and subtelomeres
    • Fabre, E., Muller, H., Therizols, P., Lafontaine, I., Dujon, B., and Fairhead, C. 2005. Comparative genomics in hemiascomycete yeasts: Evolution of sex, silencing, and subtelomeres. Mol. Biol. Evol. 22: 856-873.
    • (2005) Mol. Biol. Evol , vol.22 , pp. 856-873
    • Fabre, E.1    Muller, H.2    Therizols, P.3    Lafontaine, I.4    Dujon, B.5    Fairhead, C.6
  • 11
    • 0037083982 scopus 로고    scopus 로고
    • A central role for Plasmodium falciparum subtelomeric regions in spatial positioning and telomere length regulation
    • Figueiredo, L.M., Freitas-Junior, L.H., Bottius, E., Olivo-Marin, J.C., and Scherf, A. 2002. A central role for Plasmodium falciparum subtelomeric regions in spatial positioning and telomere length regulation. EMBO J. 21: 815-824.
    • (2002) EMBO J , vol.21 , pp. 815-824
    • Figueiredo, L.M.1    Freitas-Junior, L.H.2    Bottius, E.3    Olivo-Marin, J.C.4    Scherf, A.5
  • 12
    • 0036532237 scopus 로고    scopus 로고
    • Gene silencing, cell fate and nuclear organisation
    • Fisher, A.G. and Merkenschlager, M. 2002. Gene silencing, cell fate and nuclear organisation. Curr. Opin. Genet. Dev. 12: 193-197.
    • (2002) Curr. Opin. Genet. Dev , vol.12 , pp. 193-197
    • Fisher, A.G.1    Merkenschlager, M.2
  • 13
    • 0035861202 scopus 로고    scopus 로고
    • The molecular biology of the SIR proteins
    • Gasser, S.M. and Cockell, M.M. 2001. The molecular biology of the SIR proteins. Gene 279: 1-16.
    • (2001) Gene , vol.279 , pp. 1-16
    • Gasser, S.M.1    Cockell, M.M.2
  • 15
    • 33645304637 scopus 로고    scopus 로고
    • Spatially confined polymer chains: Implications of chromatin fibre flexibility and peripheral anchoring on telomere-telomere interaction
    • Gehlen, L.R., Rosa, A., Klenin, K., Langowski, J., Gasser, S.M., and Bystricky, K. 2006. Spatially confined polymer chains: Implications of chromatin fibre flexibility and peripheral anchoring on telomere-telomere interaction. J. Phys. Condens. Matter 18: 245-252.
    • (2006) J. Phys. Condens. Matter , vol.18 , pp. 245-252
    • Gehlen, L.R.1    Rosa, A.2    Klenin, K.3    Langowski, J.4    Gasser, S.M.5    Bystricky, K.6
  • 16
    • 19344366459 scopus 로고    scopus 로고
    • Genome-wide mapping of the cohesin complex in the yeast Saccharomyces cerevisiae
    • doi: 10.1371/journal.pbio.0020259
    • Glynn, E.F., Megee, P.C., Yu, H.G., Mistrot, C., Unal, E., Koshland, D.E., DeRisi, J.L., and Gerton, J.L. 2004. Genome-wide mapping of the cohesin complex in the yeast Saccharomyces cerevisiae. PLoS Biol. 2: e259. doi: 10.1371/journal.pbio.0020259.
    • (2004) PLoS Biol , vol.2
    • Glynn, E.F.1    Megee, P.C.2    Yu, H.G.3    Mistrot, C.4    Unal, E.5    Koshland, D.E.6    DeRisi, J.L.7    Gerton, J.L.8
  • 17
    • 0029820640 scopus 로고    scopus 로고
    • The clustering of telomeres and colocalization with Rap1, Sir3, and Sir4 proteins in wild-type S. cerevisiae
    • Gotta, M., Laroche, T., Formenton, A., Maillet, L., Scherthan, H., and Gasser, S.M. 1996. The clustering of telomeres and colocalization with Rap1, Sir3, and Sir4 proteins in wild-type S. cerevisiae. J. Cell Biol. 134: 1349-1363.
    • (1996) J. Cell Biol , vol.134 , pp. 1349-1363
    • Gotta, M.1    Laroche, T.2    Formenton, A.3    Maillet, L.4    Scherthan, H.5    Gasser, S.M.6
  • 18
    • 0037422606 scopus 로고    scopus 로고
    • RNA interference machinery regulates chromosome dynamics during mitosis and meiosis in fission yeast
    • Hall, I.M., Noma, K., and Grewal, S.I. 2003. RNA interference machinery regulates chromosome dynamics during mitosis and meiosis in fission yeast. Proc. Natl. Acad. Sci. 100: 193-198.
    • (2003) Proc. Natl. Acad. Sci , vol.100 , pp. 193-198
    • Hall, I.M.1    Noma, K.2    Grewal, S.I.3
  • 19
    • 1642276329 scopus 로고    scopus 로고
    • Genetic and epigenetic regulation of the FLO gene family generates cell-surface variation in yeast
    • Halme, A., Bumgarner, S., Styles, C., and Fink, G.R. 2004. Genetic and epigenetic regulation of the FLO gene family generates cell-surface variation in yeast. Cell 116: 405-415.
    • (2004) Cell , vol.116 , pp. 405-415
    • Halme, A.1    Bumgarner, S.2    Styles, C.3    Fink, G.R.4
  • 20
    • 0037164718 scopus 로고    scopus 로고
    • Live imaging of telomeres: YKu and Sir proteins define redundant telomere-anchoring pathways in yeast
    • Hediger, F., Neumann, F.R., Van Houwe, G., Dubrana, K., and Gasser, S.M. 2002. Live imaging of telomeres: yKu and Sir proteins define redundant telomere-anchoring pathways in yeast. Curr. Biol. 12: 2076-2089.
    • (2002) Curr. Biol , vol.12 , pp. 2076-2089
    • Hediger, F.1    Neumann, F.R.2    Van Houwe, G.3    Dubrana, K.4    Gasser, S.M.5
  • 21
    • 0035824395 scopus 로고    scopus 로고
    • Chromosome dynamics in the yeast interphase nucleus
    • Heun, P., Laroche, T., Shimada, K., Furrer, P., and Gasser, S.M. 2001. Chromosome dynamics in the yeast interphase nucleus. Science 294: 2181-2186.
    • (2001) Science , vol.294 , pp. 2181-2186
    • Heun, P.1    Laroche, T.2    Shimada, K.3    Furrer, P.4    Gasser, S.M.5
  • 22
    • 33645739139 scopus 로고    scopus 로고
    • The Ctf18 RFC-like complex positions yeast telomeres but does not specify their replication time
    • Hiraga, S., Robertson, E.D., and Donaldson, A.D. 2006. The Ctf18 RFC-like complex positions yeast telomeres but does not specify their replication time. EMBO J. 25: 1505-1514.
    • (2006) EMBO J , vol.25 , pp. 1505-1514
    • Hiraga, S.1    Robertson, E.D.2    Donaldson, A.D.3
  • 25
    • 0033940731 scopus 로고    scopus 로고
    • The dynamics of yeast telomeres and silencing proteins through the cell cycle
    • Laroche, T., Martin, S.G., Tsai-Pflugfelder, M., and Gasser, S.M. 2000. The dynamics of yeast telomeres and silencing proteins through the cell cycle. J. Struct. Biol. 129: 159-174.
    • (2000) J. Struct. Biol , vol.129 , pp. 159-174
    • Laroche, T.1    Martin, S.G.2    Tsai-Pflugfelder, M.3    Gasser, S.M.4
  • 26
    • 0037018157 scopus 로고    scopus 로고
    • In vivo dissection of the chromosome condensation machinery: Reversibility of condensation distinguishes contributions of condensin and cohesin
    • Lavoie, B.D., Hogan, E., and Koshland, D. 2002. In vivo dissection of the chromosome condensation machinery: Reversibility of condensation distinguishes contributions of condensin and cohesin. J. Cell Biol. 156: 805-815.
    • (2002) J. Cell Biol , vol.156 , pp. 805-815
    • Lavoie, B.D.1    Hogan, E.2    Koshland, D.3
  • 27
    • 0033565609 scopus 로고    scopus 로고
    • Role of yeast SIR genes and mating type in directing DNA double-strand breaks to homologous and non-homologous repair paths
    • Lee, S.E., Paques, F., Sylvan, J., and Haber, J.E. 1999. Role of yeast SIR genes and mating type in directing DNA double-strand breaks to homologous and non-homologous repair paths. Curr. Biol. 9: 767-770.
    • (1999) Curr. Biol , vol.9 , pp. 767-770
    • Lee, S.E.1    Paques, F.2    Sylvan, J.3    Haber, J.E.4
  • 28
    • 0034934774 scopus 로고    scopus 로고
    • Promoter-specific binding of Rap1 revealed by genome-wide maps of protein-DNA association
    • Lieb, J.D., Liu, X., Botstein, D., and Brown, P.O. 2001. Promoter-specific binding of Rap1 revealed by genome-wide maps of protein-DNA association. Nat. Genet. 28: 327-334.
    • (2001) Nat. Genet , vol.28 , pp. 327-334
    • Lieb, J.D.1    Liu, X.2    Botstein, D.3    Brown, P.O.4
  • 29
    • 0026719621 scopus 로고
    • The structure and evolution of subtelomeric Y′ repeats in S. cerevisiae
    • Louis, E.J. and Haber, J.E. 1992. The structure and evolution of subtelomeric Y′ repeats in S. cerevisiae. Genetics 131: 559-574.
    • (1992) Genetics , vol.131 , pp. 559-574
    • Louis, E.J.1    Haber, J.E.2
  • 30
    • 0028329781 scopus 로고
    • The chromosome end in yeast: Its mosaic nature and influence on recombinational dynamics
    • Louis, E.J., Naumova, E.S., Lee, A., Naumov, G., and Haber, J.E. 1994. The chromosome end in yeast: Its mosaic nature and influence on recombinational dynamics. Genetics 136: 789-802.
    • (1994) Genetics , vol.136 , pp. 789-802
    • Louis, E.J.1    Naumova, E.S.2    Lee, A.3    Naumov, G.4    Haber, J.E.5
  • 31
    • 0029746494 scopus 로고    scopus 로고
    • Evidence for silencing compartments within the yeast nucleus: A role for telomere proximity and Sir protein concentration in silencer-mediated repression
    • Maillet, L., Boscheron, C., Gotta, M., Marcand, S., Gilson, E., and Gasser, S.M. 1996. Evidence for silencing compartments within the yeast nucleus: A role for telomere proximity and Sir protein concentration in silencer-mediated repression. Genes & Dev. 10: 1796-1811.
    • (1996) Genes & Dev , vol.10 , pp. 1796-1811
    • Maillet, L.1    Boscheron, C.2    Gotta, M.3    Marcand, S.4    Gilson, E.5    Gasser, S.M.6
  • 32
    • 0036509836 scopus 로고    scopus 로고
    • Higher-order structure in pericentric heterochromatin involves a distinct pattern of histone modification and an RNA component
    • Maison, C., Bailly, D., Peters, A.H., Quivy, J.P., Roche, D., Taddei, A., Lachner, M., Jenuwein, T., and Almouzni, G. 2002. Higher-order structure in pericentric heterochromatin involves a distinct pattern of histone modification and an RNA component. Nat. Genet. 30: 329-334.
    • (2002) Nat. Genet , vol.30 , pp. 329-334
    • Maison, C.1    Bailly, D.2    Peters, A.H.3    Quivy, J.P.4    Roche, D.5    Taddei, A.6    Lachner, M.7    Jenuwein, T.8    Almouzni, G.9
  • 33
    • 0030885925 scopus 로고    scopus 로고
    • Cohesins: Chromosomal proteins that prevent premature separation of sister chromatids
    • Michaelis, C., Ciosk, R., and Nasmyth, K. 1997. Cohesins: Chromosomal proteins that prevent premature separation of sister chromatids. Cell 91: 35-45.
    • (1997) Cell , vol.91 , pp. 35-45
    • Michaelis, C.1    Ciosk, R.2    Nasmyth, K.3
  • 35
    • 0032865543 scopus 로고    scopus 로고
    • Function and regulation of yeast hexose transporters
    • Ozcan, S. and Johnston, M. 1999. Function and regulation of yeast hexose transporters. Microbiol. Mol. Biol. Rev. 63: 554-569.
    • (1999) Microbiol. Mol. Biol. Rev , vol.63 , pp. 554-569
    • Ozcan, S.1    Johnston, M.2
  • 36
    • 33846067980 scopus 로고    scopus 로고
    • SwissRegulon: A database of genome-wide annotations of regulatory sites
    • Pachkov, M., Erb, I., Molina, N., and van Nimwegen, E. 2007. SwissRegulon: A database of genome-wide annotations of regulatory sites. Nucleic Acids Res. 35: D127-D131.
    • (2007) Nucleic Acids Res , vol.35
    • Pachkov, M.1    Erb, I.2    Molina, N.3    van Nimwegen, E.4
  • 37
    • 0027423154 scopus 로고
    • SIR3 and SIR4 proteins are required for the positioning and integrity of yeast telomeres
    • Palladino, F., Laroche, T., Gilson, E., Axelrod, A., Pillus, L., and Gasser, S.M. 1993. SIR3 and SIR4 proteins are required for the positioning and integrity of yeast telomeres. Cell 75: 543-555.
    • (1993) Cell , vol.75 , pp. 543-555
    • Palladino, F.1    Laroche, T.2    Gilson, E.3    Axelrod, A.4    Pillus, L.5    Gasser, S.M.6
  • 39
    • 0036061924 scopus 로고    scopus 로고
    • Functional analysis of the S. cerevisiae DUP240 multigene family reveals membrane-associated proteins that are not essential for cell viability
    • Poirey, R., Despons, L., Leh, V., Lafuente, M.J., Potier, S., Souciet, J.L., and Jauniaux, J.C. 2002. Functional analysis of the S. cerevisiae DUP240 multigene family reveals membrane-associated proteins that are not essential for cell viability. Microbiol. 148: 2111-2123.
    • (2002) Microbiol , vol.148 , pp. 2111-2123
    • Poirey, R.1    Despons, L.2    Leh, V.3    Lafuente, M.J.4    Potier, S.5    Souciet, J.L.6    Jauniaux, J.C.7
  • 40
  • 42
    • 0030461543 scopus 로고    scopus 로고
    • In vivo localization of DNA sequences and visualization of large-scale chromatin organization using lac operator/repressor recognition
    • Robinett, C.C., Straight, A., Li, G., Willhelm, C., Sudlow, G., Murray, A., and Belmont, A.S. 1996. In vivo localization of DNA sequences and visualization of large-scale chromatin organization using lac operator/repressor recognition. J. Cell Biol. 135: 1685-1700.
    • (1996) J. Cell Biol , vol.135 , pp. 1685-1700
    • Robinett, C.C.1    Straight, A.2    Li, G.3    Willhelm, C.4    Sudlow, G.5    Murray, A.6    Belmont, A.S.7
  • 44
    • 33846000328 scopus 로고    scopus 로고
    • The origin recognition complex functions in sister-chromatid cohesion in S. cerevisiae
    • Shimada, K. and Gasser, S.M. 2007. The origin recognition complex functions in sister-chromatid cohesion in S. cerevisiae. Cell 128: 85-99.
    • (2007) Cell , vol.128 , pp. 85-99
    • Shimada, K.1    Gasser, S.M.2
  • 45
    • 0037326054 scopus 로고    scopus 로고
    • Telomeric protein distributions and remodeling through the cell cycle in S. cerevisiae
    • Smith, C.D., Smith, D.L., DeRisi, J.L., and Blackburn, E.H. 2003. Telomeric protein distributions and remodeling through the cell cycle in S. cerevisiae. Mol. Biol. Cell 14: 556-570.
    • (2003) Mol. Biol. Cell , vol.14 , pp. 556-570
    • Smith, C.D.1    Smith, D.L.2    DeRisi, J.L.3    Blackburn, E.H.4
  • 46
    • 1942503933 scopus 로고    scopus 로고
    • Separation of silencing from perinuclear anchoring functions in yeast Ku80, Sir4 and Esc1 proteins
    • Taddei, A., Hediger, F., Neumann, F.R., Bauer, C., and Gasser, S.M. 2004a. Separation of silencing from perinuclear anchoring functions in yeast Ku80, Sir4 and Esc1 proteins. EMBO J. 23: 1301-1312.
    • (2004) EMBO J , vol.23 , pp. 1301-1312
    • Taddei, A.1    Hediger, F.2    Neumann, F.R.3    Bauer, C.4    Gasser, S.M.5
  • 47
    • 10944252995 scopus 로고    scopus 로고
    • The function of nuclear architecture: A genetic approach
    • Taddei, A., Hediger, F., Neumann, F.R., and Gasser, S.M. 2004b. The function of nuclear architecture: A genetic approach. Annu. Rev. Genet. 38: 305-345.
    • (2004) Annu. Rev. Genet , vol.38 , pp. 305-345
    • Taddei, A.1    Hediger, F.2    Neumann, F.R.3    Gasser, S.M.4
  • 48
    • 31044432248 scopus 로고    scopus 로고
    • Telomere tethering at the nuclear periphery is essential for efficient DNA double strand break repair in subtelomeric region
    • Therizols, P., Fairhead, C., Cabal, G.G., Genovesio, A., Olivo-Marin, J.C., Dujon, B., and Fabre, E. 2006. Telomere tethering at the nuclear periphery is essential for efficient DNA double strand break repair in subtelomeric region. J. Cell Biol. 172: 189-199.
    • (2006) J. Cell Biol , vol.172 , pp. 189-199
    • Therizols, P.1    Fairhead, C.2    Cabal, G.G.3    Genovesio, A.4    Olivo-Marin, J.C.5    Dujon, B.6    Fabre, E.7
  • 49
    • 0027770124 scopus 로고
    • Physical mapping of the MEL gene family in S. cerevisiae
    • Turakainen, H., Naumov, G., Naumova, E., and Korhola, M. 1993. Physical mapping of the MEL gene family in S. cerevisiae. Curr. Genet. 24: 461-464.
    • (1993) Curr. Genet , vol.24 , pp. 461-464
    • Turakainen, H.1    Naumov, G.2    Naumova, E.3    Korhola, M.4
  • 50
    • 0028172502 scopus 로고
    • Seripauperins of S. cerevisiae: A new multigene family encoding serine-poor relatives of serine-rich proteins
    • Viswanathan, M., Muthukumar, G., Cong, Y.S., and Lenard, J. 1994. Seripauperins of S. cerevisiae: A new multigene family encoding serine-poor relatives of serine-rich proteins. Gene 148: 149-153.
    • (1994) Gene , vol.148 , pp. 149-153
    • Viswanathan, M.1    Muthukumar, G.2    Cong, Y.S.3    Lenard, J.4
  • 51
    • 0035861492 scopus 로고    scopus 로고
    • Genome-wide distribution of ORC and MCM proteins in S. cerevisiae: High-resolution mapping of replication origins
    • Wyrick, J.J., Aparicio, J.G., Chen, T., Barnett, J.D., Jennings, E.G., Young, R.A., Bell, S.P., and Aparicio, O.M. 2001. Genome-wide distribution of ORC and MCM proteins in S. cerevisiae: High-resolution mapping of replication origins. Science 294: 2357-2360.
    • (2001) Science , vol.294 , pp. 2357-2360
    • Wyrick, J.J.1    Aparicio, J.G.2    Chen, T.3    Barnett, J.D.4    Jennings, E.G.5    Young, R.A.6    Bell, S.P.7    Aparicio, O.M.8


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