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Volumn 11, Issue , 2011, Pages

Amplified fragment length polymorphism of clinical and environmental Vibrio cholerae from a freshwater environment in a cholera-endemic area, India

Author keywords

[No Author keywords available]

Indexed keywords

AMPLIFIED FRAGMENT LENGTH POLYMORPHISM; ARTICLE; BACTERIAL GENE; BACTERIAL GENOME; BACTERIAL STRAIN; BACTERIAL VIRULENCE; BACTERIUM ISOLATE; CHOLERA; CLADISTICS; CLINICAL ASSESSMENT; CONTROLLED STUDY; CTXA GENE; CTXB GENE; ENDEMIC DISEASE; ENVIRONMENTAL FACTOR; EVOLUTIONARY ADAPTATION; FRESHWATER ENVIRONMENT; GENETIC VARIABILITY; INDIA; MICROBIAL COMMUNITY; MICROBIAL DIVERSITY; NONHUMAN; TCPA GENE; TOXR GENE; TOXT GENE; VIBRIO CHOLERAE; CLASSIFICATION; CLUSTER ANALYSIS; GENETIC POLYMORPHISM; GENETICS; GENOTYPE; HUMAN; ISOLATION AND PURIFICATION; MICROBIOLOGY; MOLECULAR TYPING;

EID: 80053175296     PISSN: None     EISSN: 14712334     Source Type: Journal    
DOI: 10.1186/1471-2334-11-249     Document Type: Article
Times cited : (15)

References (36)
  • 1
    • 77950349777 scopus 로고    scopus 로고
    • Cholera vaccines: WHO position paper
    • WHO
    • WHO Cholera vaccines: WHO position paper. Wkly Epidemiol Rec 2010, 85:117-128. WHO.
    • (2010) Wkly Epidemiol Rec , vol.85 , pp. 117-128
  • 3
    • 0642345088 scopus 로고    scopus 로고
    • Lipopolysaccharides of Vibrio cholerae. I. Physical and chemical characterization
    • Chatterjee SN, Chaudhuri K. Lipopolysaccharides of Vibrio cholerae. I. Physical and chemical characterization. Biochim Biophys Acta 2003, 1639:65-79.
    • (2003) Biochim Biophys Acta , vol.1639 , pp. 65-79
    • Chatterjee, S.N.1    Chaudhuri, K.2
  • 4
    • 0030057090 scopus 로고    scopus 로고
    • Lysogenic conversion by a filamentous phage encoding cholera toxin
    • Waldor MK, Mekalanos JJ. Lysogenic conversion by a filamentous phage encoding cholera toxin. Science 1996, 72:1910-1914.
    • (1996) Science , vol.72 , pp. 1910-1914
    • Waldor, M.K.1    Mekalanos, J.J.2
  • 5
    • 0032539912 scopus 로고    scopus 로고
    • A Vibrio cholerae pathogenicity island associated with epidemic and pandemic strains
    • 10.1073/pnas.95.6.3134, 19707, 9501228
    • Karaolis DK, Johnson JA, Bailey CC, Boedeker EC, Kaper JB, Reeves PR. A Vibrio cholerae pathogenicity island associated with epidemic and pandemic strains. Proc Natl Acad Sci 1998, 95(6):3134-3139. 10.1073/pnas.95.6.3134, 19707, 9501228.
    • (1998) Proc Natl Acad Sci , vol.95 , Issue.6 , pp. 3134-3139
    • Karaolis, D.K.1    Johnson, J.A.2    Bailey, C.C.3    Boedeker, E.C.4    Kaper, J.B.5    Reeves, P.R.6
  • 6
    • 0026519517 scopus 로고
    • Co-ordinate expression of virulence genes by ToxR in Vibrio cholerae
    • 10.1111/j.1365-2958.1992.tb01489.x, 1560773
    • DiRita VJ. Co-ordinate expression of virulence genes by ToxR in Vibrio cholerae. Mol Microbiol 1992, 6(4):451-458. 10.1111/j.1365-2958.1992.tb01489.x, 1560773.
    • (1992) Mol Microbiol , vol.6 , Issue.4 , pp. 451-458
    • DiRita, V.J.1
  • 7
    • 0037337810 scopus 로고    scopus 로고
    • Comparative genomic analyses of the Vibrio pathogenicity island and cholera toxin prophage regions in nonepidemic serogroup strains of Vibrio cholerae
    • 10.1128/AEM.69.3.1728-1738.2003, 150053, 12620865
    • Li M, Kotetishvili M, Chen Y, Sozhamannan S. Comparative genomic analyses of the Vibrio pathogenicity island and cholera toxin prophage regions in nonepidemic serogroup strains of Vibrio cholerae. Appl Environ Microbiol 2003, 69(3):1728-1738. 10.1128/AEM.69.3.1728-1738.2003, 150053, 12620865.
    • (2003) Appl Environ Microbiol , vol.69 , Issue.3 , pp. 1728-1738
    • Li, M.1    Kotetishvili, M.2    Chen, Y.3    Sozhamannan, S.4
  • 8
    • 0033914615 scopus 로고    scopus 로고
    • Sunlight-induced propagation of the lysogenic phage encoding cholera toxin
    • 10.1128/IAI.68.8.4795-4801.2000, 98441, 10899892
    • Faruque SM, Asadulghani Rahman MM, Waldor MK, Sack DA. Sunlight-induced propagation of the lysogenic phage encoding cholera toxin. Infect Immun 2000, 68:4795-4801. 10.1128/IAI.68.8.4795-4801.2000, 98441, 10899892.
    • (2000) Infect Immun , vol.68 , pp. 4795-4801
    • Faruque, S.M.1    Asadulghani Rahman, M.M.2    Waldor, M.K.3    Sack, D.A.4
  • 9
    • 0028456008 scopus 로고
    • The aquatic flora and fauna as reservoirs of Vibrio cholerae: a review
    • Islam MS, Drasar BS, Sack RB. The aquatic flora and fauna as reservoirs of Vibrio cholerae: a review. J Diarrhoeal Dis Res 1994, 12(2):87-96.
    • (1994) J Diarrhoeal Dis Res , vol.12 , Issue.2 , pp. 87-96
    • Islam, M.S.1    Drasar, B.S.2    Sack, R.B.3
  • 11
    • 0034902143 scopus 로고    scopus 로고
    • Characterization of VPI pathogenicity island and CTXphi prophage in environmental strains of Vibrio cholerae
    • 10.1128/JB.183.16.4737-4746.2001, 99527, 11466276
    • Mukhopadhyay AK, Chakraborty S, Takeda Y, Nair GB, Berg DE. Characterization of VPI pathogenicity island and CTXphi prophage in environmental strains of Vibrio cholerae. J Bacteriol 2001, 183(16):4737-4746. 10.1128/JB.183.16.4737-4746.2001, 99527, 11466276.
    • (2001) J Bacteriol , vol.183 , Issue.16 , pp. 4737-4746
    • Mukhopadhyay, A.K.1    Chakraborty, S.2    Takeda, Y.3    Nair, G.B.4    Berg, D.E.5
  • 12
    • 0344899211 scopus 로고    scopus 로고
    • A recent outbreak of cholera due to Vibrio cholerae O1 Ogawa in and around Chandigarh, North India
    • Taneja N, Kaur J, Sharma K, Singh M, Kalra JK, Sharma NM, Sharma M. A recent outbreak of cholera due to Vibrio cholerae O1 Ogawa in and around Chandigarh, North India. Ind J Med Res 2003, 117:243-246.
    • (2003) Ind J Med Res , vol.117 , pp. 243-246
    • Taneja, N.1    Kaur, J.2    Sharma, K.3    Singh, M.4    Kalra, J.K.5    Sharma, N.M.6    Sharma, M.7
  • 13
    • 26844486581 scopus 로고    scopus 로고
    • Emergence of Vibrio cholerae O1 biotype ElTor serotype Inaba in North India
    • Taneja N, Biswal M, Tarai B, Sharma M. Emergence of Vibrio cholerae O1 biotype ElTor serotype Inaba in North India. Jpn J Infect Dis 2005, 58:238-240.
    • (2005) Jpn J Infect Dis , vol.58 , pp. 238-240
    • Taneja, N.1    Biswal, M.2    Tarai, B.3    Sharma, M.4
  • 14
    • 63849315801 scopus 로고    scopus 로고
    • Cholera outbreaks in north India due to new variants of Vibrio cholerae O1 El Tor
    • 10.3201/eid1502.080943, 2657627, 19193297
    • Taneja N, Mishra A, Sangar G, Singh G, Sharma M. Cholera outbreaks in north India due to new variants of Vibrio cholerae O1 El Tor. Emerg Infect Dis 2009, 15:352-352. 10.3201/eid1502.080943, 2657627, 19193297.
    • (2009) Emerg Infect Dis , vol.15 , pp. 352-352
    • Taneja, N.1    Mishra, A.2    Sangar, G.3    Singh, G.4    Sharma, M.5
  • 15
    • 78149371975 scopus 로고    scopus 로고
    • Emergence of tetracycline resistance in Vibrio cholerae O1 biotype ElTor serotype Ogawa from North India
    • Taneja N, Samanta P, Mishra A, Sharma M. Emergence of tetracycline resistance in Vibrio cholerae O1 biotype ElTor serotype Ogawa from North India. Ind J Pathol Microbiol 2010, 53:865-866.
    • (2010) Ind J Pathol Microbiol , vol.53 , pp. 865-866
    • Taneja, N.1    Samanta, P.2    Mishra, A.3    Sharma, M.4
  • 16
    • 0038449000 scopus 로고    scopus 로고
    • Vibrio, Aeromonas, Plesiomonas, Camplylobacter, Arcobacter, Helicobacter, Wolinella
    • Churchill Livingstone, Collee JG, Fraser AG, Marmion BP, Simmons A Edinburgh
    • Old DC. Vibrio, Aeromonas, Plesiomonas, Camplylobacter, Arcobacter, Helicobacter, Wolinella. Mackie and McCartney practical medical microbiology 1996, 425-48. Churchill Livingstone, Collee JG, Fraser AG, Marmion BP, Simmons A Edinburgh.
    • (1996) Mackie and McCartney practical medical microbiology , pp. 425-448
    • Old, D.C.1
  • 17
    • 0034458778 scopus 로고    scopus 로고
    • Rapid method for species-specific identification of Vibrio cholerae using primers targeted to the gene of outer membrane protein OmpW
    • 87555, 11060082
    • Nandi B, Nandy RK, Mukhopadhyay S, Nair GB, Shimada T, Ghose AC. Rapid method for species-specific identification of Vibrio cholerae using primers targeted to the gene of outer membrane protein OmpW. J Clin Microbiol 2000, 38:4145-4151. 87555, 11060082.
    • (2000) J Clin Microbiol , vol.38 , pp. 4145-4151
    • Nandi, B.1    Nandy, R.K.2    Mukhopadhyay, S.3    Nair, G.B.4    Shimada, T.5    Ghose, A.C.6
  • 18
    • 0027312324 scopus 로고
    • Detection and biotyping of Vibrio cholerae O1 with multiplex polymerase chain reaction
    • 10.1016/0140-6736(93)90792-F, 8100020
    • Keasler SP, Hall RH. Detection and biotyping of Vibrio cholerae O1 with multiplex polymerase chain reaction. Lancet 1993, 341:1661. 10.1016/0140-6736(93)90792-F, 8100020.
    • (1993) Lancet , vol.341 , pp. 1661
    • Keasler, S.P.1    Hall, R.H.2
  • 19
    • 52649172191 scopus 로고    scopus 로고
    • Development and validation of a mismatch amplification mutation PCR assay to monitor the disemination of an emerging variant of Vibrio choleraeO1 biotype Eltor
    • 10.1111/j.1348-0421.2008.00041.x, 18577166
    • Morita M, Ohnishi M, Arakawa E, Bhuiyan NA, Nusrin S, Alam M, Siddique AK, Qadri F, Izumiya H, Nair GB, Watanabe H. Development and validation of a mismatch amplification mutation PCR assay to monitor the disemination of an emerging variant of Vibrio choleraeO1 biotype Eltor. Microbiol Immunol 2008, 52(6):314-317. 10.1111/j.1348-0421.2008.00041.x, 18577166.
    • (2008) Microbiol Immunol , vol.52 , Issue.6 , pp. 314-317
    • Morita, M.1    Ohnishi, M.2    Arakawa, E.3    Bhuiyan, N.A.4    Nusrin, S.5    Alam, M.6    Siddique, A.K.7    Qadri, F.8    Izumiya, H.9    Nair, G.B.10    Watanabe, H.11
  • 20
    • 0035378336 scopus 로고    scopus 로고
    • Genotypes associated with virulence in environmental isolates of Vibrio cholerae
    • 10.1128/AEM.67.6.2421-2429.2001, 92890, 11375146
    • Rivera ING, Chun J, Huq A, Sack BR, Colwell R. Genotypes associated with virulence in environmental isolates of Vibrio cholerae. Appl Environ Microbiol 2001, 67:2421-2429. 10.1128/AEM.67.6.2421-2429.2001, 92890, 11375146.
    • (2001) Appl Environ Microbiol , vol.67 , pp. 2421-2429
    • Rivera, I.N.G.1    Chun, J.2    Huq, A.3    Sack, B.R.4    Colwell, R.5
  • 24
    • 0023738045 scopus 로고
    • Numerical index of the discriminatory ability of typing systems: an application of Simpson's index of diversity
    • Hunter PR, Gaston MA. Numerical index of the discriminatory ability of typing systems: an application of Simpson's index of diversity. J Clin Microbiol 1988, 472(26):2465-2466.
    • (1988) J Clin Microbiol , vol.472 , Issue.26 , pp. 2465-2466
    • Hunter, P.R.1    Gaston, M.A.2
  • 26
    • 0000071395 scopus 로고
    • Some distance properties of latent root and vector methods using multivariate analysis
    • Biometrika
    • Gower JC. Some distance properties of latent root and vector methods using multivariate analysis. 1966, 53:325-338. Biometrika.
    • (1966) , vol.53 , pp. 325-338
    • Gower, J.C.1
  • 28
    • 0036135021 scopus 로고    scopus 로고
    • Pandemic spread of cholera: genetic diversity and relationships within the seventh pandemic clone of Vibrio cholerae determined by amplified fragment length polymorphism
    • 10.1128/JCM.40.1.172-181.2002, 120103, 11773113
    • Lan R, Reeves PR. Pandemic spread of cholera: genetic diversity and relationships within the seventh pandemic clone of Vibrio cholerae determined by amplified fragment length polymorphism. J Clin Microbiol 2002, 40(1):172-181. 10.1128/JCM.40.1.172-181.2002, 120103, 11773113.
    • (2002) J Clin Microbiol , vol.40 , Issue.1 , pp. 172-181
    • Lan, R.1    Reeves, P.R.2
  • 31
    • 72949119779 scopus 로고    scopus 로고
    • Evolution of new variants of Vibrio cholerae
    • 10.1016/j.tim.2009.10.003, 19942436
    • Safa A, Nair GB, Kong RYC. Evolution of new variants of Vibrio cholerae. Trends Microbiol 2010, 18:46-54. 10.1016/j.tim.2009.10.003, 19942436.
    • (2010) Trends Microbiol , vol.18 , pp. 46-54
    • Safa, A.1    Nair, G.B.2    Kong, R.Y.C.3
  • 32
    • 0037952779 scopus 로고    scopus 로고
    • Genomic diversity of clinical and environmental Vibrio cholerae strains isolated in Brazil between 1991 and 2001 as revealed by fluorescent amplified fragment length polymorphism analysis
    • 10.1128/JCM.41.5.1946-1950.2003, 154745, 12734232
    • Thompson FL, Thompson CC, Vicente AC, Theophilo GN, Hofer E, Swings J. Genomic diversity of clinical and environmental Vibrio cholerae strains isolated in Brazil between 1991 and 2001 as revealed by fluorescent amplified fragment length polymorphism analysis. J Clin Microbiol 2003, 41(5):1946-1950. 10.1128/JCM.41.5.1946-1950.2003, 154745, 12734232.
    • (2003) J Clin Microbiol , vol.41 , Issue.5 , pp. 1946-1950
    • Thompson, F.L.1    Thompson, C.C.2    Vicente, A.C.3    Theophilo, G.N.4    Hofer, E.5    Swings, J.6
  • 33
    • 0037126072 scopus 로고    scopus 로고
    • Genomic profiles of clinical and environmental isolates of Vibrio cholerae O1 in cholera-endemic areas of Bangladesh
    • 10.1073/pnas.192426499, 129458, 12205294
    • Zo YG, Rivera ING, Cohen ER, Islam MS, Siddique AK, Yunus M, Sack RB, Huq A, Colwell RR. Genomic profiles of clinical and environmental isolates of Vibrio cholerae O1 in cholera-endemic areas of Bangladesh. Proc Natl Acad Sci 2002, 99:12409-12414. 10.1073/pnas.192426499, 129458, 12205294.
    • (2002) Proc Natl Acad Sci , vol.99 , pp. 12409-12414
    • Zo, Y.G.1    Rivera, I.N.G.2    Cohen, E.R.3    Islam, M.S.4    Siddique, A.K.5    Yunus, M.6    Sack, R.B.7    Huq, A.8    Colwell, R.R.9
  • 36
    • 0036840879 scopus 로고    scopus 로고
    • Seasonality of Chesapeake bay bacterioplankton species
    • 10.1128/AEM.68.11.5488-5497.2002, 129892, 12406742
    • Heidelberg JF, Heidelberg KB, Colwell RR. Seasonality of Chesapeake bay bacterioplankton species. Appl Environ Microbiol 2002, 68:5488-5497. 10.1128/AEM.68.11.5488-5497.2002, 129892, 12406742.
    • (2002) Appl Environ Microbiol , vol.68 , pp. 5488-5497
    • Heidelberg, J.F.1    Heidelberg, K.B.2    Colwell, R.R.3


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