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Volumn 500, Issue , 2011, Pages 215-231

Towards a full quantitative description of yeast metabolism: A systematic approach for estimating the kinetic parameters of isoenzymes under in vivo like conditions

Author keywords

Enzyme assays; Glycolytic isoenzymes; Kinetic parameters; KineticsWizard; Pyruvate decarboxylase; Yeast metabolism

Indexed keywords

6 PHOSPHOFRUCTOKINASE; ALCOHOL DEHYDROGENASE; ENOLASE; FRUCTOSE BISPHOSPHATE ALDOLASE; GLUCOKINASE; GLUCOSE 6 PHOSPHATE ISOMERASE; GLYCERALDEHYDE 3 PHOPSPHATE DEHYDROGENASE; HEXOKINASE; ISOENZYME; PHOSPHOGLYCERATE MUTASE; PYRUVATE DECARBOXYLASE; PYRUVATE KINASE; TRIOSEPHOSPHATE ISOMERASE; UNCLASSIFIED DRUG;

EID: 80053084213     PISSN: 00766879     EISSN: 15577988     Source Type: Book Series    
DOI: 10.1016/B978-0-12-385118-5.00012-8     Document Type: Chapter
Times cited : (3)

References (25)
  • 1
    • 23144442824 scopus 로고    scopus 로고
    • Multiplexed absolute quantification in proteomics using artificial QCAT proteins of concatenated signature peptides
    • DOI 10.1038/nmeth774
    • R.J. Beynon, M.K. Doherty, J.M. Pratt, and S.J. Gaskell Multiplexed absolute quantification in proteomics using artificial QCAT proteins of concatenated signature peptides Nat. Methods 2 2005 587 589 (Pubitemid 41086849)
    • (2005) Nature Methods , vol.2 , Issue.8 , pp. 587-589
    • Beynon, R.J.1    Doherty, M.K.2    Pratt, J.M.3    Gaskell, S.J.4
  • 2
    • 34249915403 scopus 로고    scopus 로고
    • Prediction of enzyme kinetic parameters based on statistical learning
    • S. Borger, W. Libermeister, and E. Klipp Prediction of enzyme kinetic parameters based on statistical learning Genome Inform. 17 2006 80 87
    • (2006) Genome Inform. , vol.17 , pp. 80-87
    • Borger, S.1    Libermeister, W.2    Klipp, E.3
  • 3
    • 33846017352 scopus 로고    scopus 로고
    • The nature of systems biology
    • DOI 10.1016/j.tim.2006.11.003, PII S0966842X06002642
    • F.J. Bruggeman, and H.V. Westerhoff The nature of systems biology Trends Microbiol. 15 2006 45 50 (Pubitemid 46043550)
    • (2007) Trends in Microbiology , vol.15 , Issue.1 , pp. 45-50
    • Bruggeman, F.J.1    Westerhoff, H.V.2
  • 4
    • 80053058108 scopus 로고    scopus 로고
    • Quantification of proteins and their modifications using QconCAT technology
    • K.M. Carroll, F. Lanucara, and C.E. Eyers Quantification of proteins and their modifications using QconCAT technology Methods Enzymol. 500 2011 113 131
    • (2011) Methods Enzymol. , vol.500 , pp. 113-131
    • Carroll, K.M.1    Lanucara, F.2    Eyers, C.E.3
  • 8
    • 0037716676 scopus 로고    scopus 로고
    • Building with a scaffold: Emerging strategies for high- to low-level cellular modeling
    • DOI 10.1016/S0167-7799(03)00115-X
    • T. Ideker, and D. Lauffenburger Building with a scaffold: Emerging strategies for high- to low-level cellular modelling Trends Biotechnol. 21 2003 255 262 (Pubitemid 36645212)
    • (2003) Trends in Biotechnology , vol.21 , Issue.6 , pp. 255-262
    • Ideker, T.1    Lauffenburger, D.2
  • 9
    • 0037079054 scopus 로고    scopus 로고
    • Computational systems biology
    • DOI 10.1038/nature01254
    • H. Kitano Computational systems biology: A brief overview Nature 420 2002 206 210 (Pubitemid 35340131)
    • (2002) Nature , vol.420 , Issue.6912 , pp. 206-210
    • Kitano, H.1
  • 10
    • 0036500993 scopus 로고    scopus 로고
    • Systems biology: A brief overview
    • H. Kitano Systems biology: A brief overview Science 295 2002 1662
    • (2002) Science , vol.295 , pp. 1662
    • Kitano, H.1
  • 11
    • 33746927955 scopus 로고    scopus 로고
    • International alliances for quantitative modeling in systems biology
    • 10.1038/msb4100011 News and Views
    • H. Kitano International alliances for quantitative modeling in systems biology Mol. Syst. Biol. 1 2005 10.1038/msb4100011 News and Views
    • (2005) Mol. Syst. Biol. , vol.1
    • Kitano, H.1
  • 12
    • 4644301730 scopus 로고    scopus 로고
    • A benchmark for methods in reverse engineering and model discrimination: Problem formulation and solutions
    • DOI 10.1101/gr.1226004
    • A. Kremling, S. Fischer, K. Gadkar, F.J. Doyle, T. Sauter, E. Bullinger, F. Allgöwer, and E.D. Gilles A benchmark for methods in reverse engineering and model discrimination: Problem formulation and solutions Genome Res. 14 2004 1773 1785 (Pubitemid 39276436)
    • (2004) Genome Research , vol.14 , Issue.9 , pp. 1773-1785
    • Kremling, A.1    Fischer, S.2    Gadkar, K.3    Doyle, F.J.4    Sauter, T.5    Bullinger, E.6    Allgower, F.7    Gilles, E.D.8
  • 14
    • 80053056359 scopus 로고    scopus 로고
    • Protein production in Saccharomyces cerevisiae for systems biology studies
    • N. Malys Protein production in Saccharomyces cerevisiae for systems biology studies Methods Enzymol. 500 2011 197 212
    • (2011) Methods Enzymol. , vol.500 , pp. 197-212
    • Malys, N.1
  • 15
    • 71549133050 scopus 로고    scopus 로고
    • Enzyme kinetics and computational modeling for systems biology
    • P. Mendes, H. Messiha, N. Malys, and S. Hoops Enzyme kinetics and computational modeling for systems biology Methods Enzymol. 467 2009 583 599
    • (2009) Methods Enzymol. , vol.467 , pp. 583-599
    • Mendes, P.1    Messiha, H.2    Malys, N.3    Hoops, S.4
  • 16
    • 0242574982 scopus 로고    scopus 로고
    • Parameter estimation in biochemical pathways: A comparison of global optimization methods
    • DOI 10.1101/gr.1262503
    • C.G. Moles, P. Mendes, and J.R. Banga Parameter estimation in biochemical pathways: A comparison of global optimization methods Genome Res. 13 2003 2467 2474 (Pubitemid 37428271)
    • (2003) Genome Research , vol.13 , Issue.11 , pp. 2467-2474
    • Moles, C.G.1    Mendes, P.2    Banga, J.R.3
  • 17
    • 33847179916 scopus 로고    scopus 로고
    • Multiplexed absolute quantification for proteomics using concatenated signature peptides encoded by QconCAT genes
    • J.M. Pratt, D.M. Simpson, M.K. Doherty, J. Rivers, S.J. Gaskell, and R.J. Beynon Multiplexed absolute quantification for proteomics using concatenated signature peptides encoded by QconCAT genes Nat. Protoc. 1 2006 1029 1043
    • (2006) Nat. Protoc. , vol.1 , pp. 1029-1043
    • Pratt, J.M.1    Simpson, D.M.2    Doherty, M.K.3    Rivers, J.4    Gaskell, S.J.5    Beynon, R.J.6
  • 18
    • 0032828715 scopus 로고    scopus 로고
    • A generic protein purification method for protein complex characterization and proteome exploration
    • DOI 10.1038/13732
    • G. Rigaut, A. Shevchenko, B. Rutz, M. Wilm, M. Mann, and B. Séraphin A generic protein purification method for protein complex characterization and proteome exploration Nat. Biotechnol. 17 1999 1030 1032 (Pubitemid 29474865)
    • (1999) Nature Biotechnology , vol.17 , Issue.10 , pp. 1030-1032
    • Rigaut, G.1    Shevchenko, A.2    Rutz, B.3    Wilm, M.4    Mann, M.5    Seraphin, B.6
  • 22
    • 39449110964 scopus 로고    scopus 로고
    • Calculating enzyme kinetic parameters from protein structures
    • DOI 10.1042/BST0360051
    • M. Stein, R.R. Gabdoulline, and R.C. Wade Calculating enzyme kinetic parameters from protein structures Biochem. Soc. Trans. 36 2008 51 54 (Pubitemid 351269620)
    • (2008) Biochemical Society Transactions , vol.36 , Issue.1 , pp. 51-54
    • Stein, M.1    Gabdoulline, R.R.2    Wade, R.C.3
  • 24
    • 0020743610 scopus 로고
    • Theoretical and experimental analyses of coupled enzyme reactions
    • I. Takagahara, J. Yamauti, K. Fujii, J. Yamashita, and T. Horio Theoretical and experimental analyses of coupled enzyme reactions J. Biochem. 93 1983 1145 1157
    • (1983) J. Biochem. , vol.93 , pp. 1145-1157
    • Takagahara, I.1    Yamauti, J.2    Fujii, K.3    Yamashita, J.4    Horio, T.5


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