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Volumn 76, Issue , 2011, Pages 79-103

Detection and Quantification of Microbial Cells in Subsurface Sediments

Author keywords

Cell counting; Deep biosphere; Fluorescence microscopy; Subsurface life

Indexed keywords

AUTOMATION; BIOMASS; BOOK; CELL COUNT; CELL SEPARATION; FLUORESCENCE MICROSCOPY; MICROORGANISM DETECTION; NONHUMAN; QUANTITATIVE ANALYSIS; REPRODUCIBILITY; SAMPLING; SEDIMENT; STAINING;

EID: 80052883953     PISSN: 00652164     EISSN: None     Source Type: Book Series    
DOI: 10.1016/B978-0-12-387048-3.00003-9     Document Type: Chapter
Times cited : (8)

References (96)
  • 1
    • 0345364819 scopus 로고
    • Estimation of bacterial density
    • American Public Health Association, A.E. Eaton, L.S. Clesceri, E.W. Rice, A.E. Greenberg (Eds.)
    • Estimation of bacterial density. Standard Methods for the Examination of Water and Wastewater 1989, 977-980. American Public Health Association. A.E. Eaton, L.S. Clesceri, E.W. Rice, A.E. Greenberg (Eds.).
    • (1989) Standard Methods for the Examination of Water and Wastewater , pp. 977-980
  • 2
    • 2442513270 scopus 로고    scopus 로고
    • Assessment of enzymatic cleaning agents and disinfectants against bacterial biofilms
    • Augustin M., Ali-Vehmas T., Atroshi F. Assessment of enzymatic cleaning agents and disinfectants against bacterial biofilms. J. Pharm. Pharm. Sci. 2004, 7:55-64.
    • (2004) J. Pharm. Pharm. Sci. , vol.7 , pp. 55-64
    • Augustin, M.1    Ali-Vehmas, T.2    Atroshi, F.3
  • 4
    • 0030920204 scopus 로고    scopus 로고
    • A species-specific productivity method using immunomagnetic separation and radiotracer experiments
    • Bard D.G., Ward B.B. A species-specific productivity method using immunomagnetic separation and radiotracer experiments. J. Microbiol. Methods 1997, 28:207-219.
    • (1997) J. Microbiol. Methods , vol.28 , pp. 207-219
    • Bard, D.G.1    Ward, B.B.2
  • 6
    • 0142091777 scopus 로고    scopus 로고
    • A new enzymatic method for the detachment of particle associated soil bacteria
    • Böckelmann U., Szewzyk U., Grohmann E. A new enzymatic method for the detachment of particle associated soil bacteria. J. Microbiol. Methods 2003, 55:201-211.
    • (2003) J. Microbiol. Methods , vol.55 , pp. 201-211
    • Böckelmann, U.1    Szewzyk, U.2    Grohmann, E.3
  • 9
    • 0025311782 scopus 로고
    • Rates of bacterial metabolism in deep coastal-plain aquifers
    • Chapelle F.H., Lovley D.R. Rates of bacterial metabolism in deep coastal-plain aquifers. Appl. Environ. Microbiol. 1990, 56:1856-1874.
    • (1990) Appl. Environ. Microbiol. , vol.56 , pp. 1856-1874
    • Chapelle, F.H.1    Lovley, D.R.2
  • 11
    • 0037189378 scopus 로고    scopus 로고
    • Ongoing modification of Mediterranean Pleistocene Sapropels mediated by Prokaryotes
    • Coolen M.J.L., Cypionka H., Sass A.M., Sass H., Overmann J. Ongoing modification of Mediterranean Pleistocene Sapropels mediated by Prokaryotes. Science 2002, 296:2407-2410.
    • (2002) Science , vol.296 , pp. 2407-2410
    • Coolen, M.J.L.1    Cypionka, H.2    Sass, A.M.3    Sass, H.4    Overmann, J.5
  • 13
    • 23544462582 scopus 로고
    • Limits for qualitative and quantitative determination-Application to radiochemistry
    • Currie L.A. Limits for qualitative and quantitative determination-Application to radiochemistry. Anal. Chem. 1968, 40:586-593.
    • (1968) Anal. Chem. , vol.40 , pp. 586-593
    • Currie, L.A.1
  • 16
    • 84986759532 scopus 로고
    • Direct counts of aquatic bacteria by a modified Epifluorescence technique
    • Daley R.J., Hobbie J.E. Direct counts of aquatic bacteria by a modified Epifluorescence technique. Limnol. Oceanogr. 1975, 20:875-882.
    • (1975) Limnol. Oceanogr. , vol.20 , pp. 875-882
    • Daley, R.J.1    Hobbie, J.E.2
  • 17
    • 0021929837 scopus 로고
    • Adaptation of the membrane lipids of a deep-sea bacterium to changes in hydrostatic pressure
    • Doi: 10.1126/science.3992247
    • DeLong E., Yayanos A. Adaptation of the membrane lipids of a deep-sea bacterium to changes in hydrostatic pressure. Science 1985, 228:1101-1103. Doi: 10.1126/science.3992247.
    • (1985) Science , vol.228 , pp. 1101-1103
    • DeLong, E.1    Yayanos, A.2
  • 18
    • 32244440933 scopus 로고    scopus 로고
    • Flow cytometric analysis of bacteria- and virus-like particles in lake sediments
    • Duhamel S., Jacquet S. Flow cytometric analysis of bacteria- and virus-like particles in lake sediments. J. Microbiol. Methods 2006, 64:316-332.
    • (2006) J. Microbiol. Methods , vol.64 , pp. 316-332
    • Duhamel, S.1    Jacquet, S.2
  • 19
    • 0033943880 scopus 로고    scopus 로고
    • Whole-cell versus total RNA extraction for analysis of microbial community structure with 16S rRNA-targeted oligonucleotide probes in salt marsh sediments
    • Frischer M.E., Danforth J.M., Newton Healy M.A., Saunders F.M. Whole-cell versus total RNA extraction for analysis of microbial community structure with 16S rRNA-targeted oligonucleotide probes in salt marsh sediments. Appl. Environ. Microbiol. 2000, 66:3037-3043.
    • (2000) Appl. Environ. Microbiol. , vol.66 , pp. 3037-3043
    • Frischer, M.E.1    Danforth, J.M.2    Newton Healy, M.A.3    Saunders, F.M.4
  • 20
    • 0003019306 scopus 로고
    • Determination of biomass
    • Academic Press Inc, Elsevier, J.R. Norris, R. Grigorova (Eds.)
    • Fry J.C. Determination of biomass. Methods in Aquatic Bacteriology 1988, Academic Press Inc, Elsevier. J.R. Norris, R. Grigorova (Eds.).
    • (1988) Methods in Aquatic Bacteriology
    • Fry, J.C.1
  • 21
    • 84859468912 scopus 로고    scopus 로고
    • Community structure, activity and ecophysiology of sulfate-reducing bacteria in deep tidal flat sediments
    • Carl von Ossietzky University of Oldenburg, Germany
    • Gittel A. Community structure, activity and ecophysiology of sulfate-reducing bacteria in deep tidal flat sediments. Fakultät für Mathematik und Naturwissenschaften 2007, 123. Carl von Ossietzky University of Oldenburg, Germany.
    • (2007) Fakultät für Mathematik und Naturwissenschaften , pp. 123
    • Gittel, A.1
  • 23
    • 84987341279 scopus 로고
    • Attached and free bacteria in an estuary with abundant suspended solids
    • Goulder R. Attached and free bacteria in an estuary with abundant suspended solids. J. Appl. Bacteriol. 1977, 43:399-405.
    • (1977) J. Appl. Bacteriol. , vol.43 , pp. 399-405
    • Goulder, R.1
  • 26
    • 0028933108 scopus 로고
    • Comparison of drilling and mining as methods for obtaining microbiological samples from the deep subsurface
    • Haldeman D.L., Amy P.S., Russell C.E., Jacobson R. Comparison of drilling and mining as methods for obtaining microbiological samples from the deep subsurface. J. Microbiol. Methods 1995, 21:305-316.
    • (1995) J. Microbiol. Methods , vol.21 , pp. 305-316
    • Haldeman, D.L.1    Amy, P.S.2    Russell, C.E.3    Jacobson, R.4
  • 27
    • 0017654644 scopus 로고
    • Use of nuclepore filters for counting bacteria by fluorescence microscopy
    • Hobbie J.E., Daley R.J., Jasper S. Use of nuclepore filters for counting bacteria by fluorescence microscopy. Appl. Environ. Microbiol. 1977, 33:1225-1228.
    • (1977) Appl. Environ. Microbiol. , vol.33 , pp. 1225-1228
    • Hobbie, J.E.1    Daley, R.J.2    Jasper, S.3
  • 28
    • 59349086394 scopus 로고    scopus 로고
    • The GeoBiosphere
    • Group G, Springer, Berlin, Heidelberg, New York, U. Harms, C. Koeberl, M.D. Zoback (Eds.)
    • Horsfield B., Kieft T.L. The GeoBiosphere. Continental Scientific Drilling 2007, 163-213. Group G, Springer, Berlin, Heidelberg, New York. U. Harms, C. Koeberl, M.D. Zoback (Eds.).
    • (2007) Continental Scientific Drilling , pp. 163-213
    • Horsfield, B.1    Kieft, T.L.2
  • 30
    • 0015231946 scopus 로고
    • Microbial degradation of organic matter in the deep sea
    • Jannasch H.W. Microbial degradation of organic matter in the deep sea. Science 1971, 171:672-675.
    • (1971) Science , vol.171 , pp. 672-675
    • Jannasch, H.W.1
  • 32
    • 0030854454 scopus 로고    scopus 로고
    • Separation of bacterial cells by isoelectric focusing, a new method for analysis of complex microbial communities
    • Jaspers E., Overmann J. Separation of bacterial cells by isoelectric focusing, a new method for analysis of complex microbial communities. Appl. Environ. Microbiol. 1997, 63:3176-3181.
    • (1997) Appl. Environ. Microbiol. , vol.63 , pp. 3176-3181
    • Jaspers, E.1    Overmann, J.2
  • 33
    • 4243987803 scopus 로고
    • SYBR Green-I and SYBR Green-II-New ultrasensitive fluorescent stains for detecting picogram levels of nucleic-acids in polyacrylamide or agarose gels
    • Jin X., Yue S., Wells K.S., Singer V.L. SYBR Green-I and SYBR Green-II-New ultrasensitive fluorescent stains for detecting picogram levels of nucleic-acids in polyacrylamide or agarose gels. FASEB J. 1994, 8:A1266.
    • (1994) FASEB J. , vol.8
    • Jin, X.1    Yue, S.2    Wells, K.S.3    Singer, V.L.4
  • 34
    • 0001268311 scopus 로고
    • SYBR Green™-1-A new fluorescent dye optimized for detection of picogram amounts of DNA in gels
    • Jin X., Yue S., Wells K.S., Singer V.L. SYBR Green™-1-A new fluorescent dye optimized for detection of picogram amounts of DNA in gels. Biophys. J. 1994, 66:A159.
    • (1994) Biophys. J. , vol.66
    • Jin, X.1    Yue, S.2    Wells, K.S.3    Singer, V.L.4
  • 35
    • 0030799166 scopus 로고    scopus 로고
    • Enzymatic removal and disinfection of bacterial biofilms
    • Johansen C., Falholt P., Gram L. Enzymatic removal and disinfection of bacterial biofilms. Appl. Environ. Microbiol. 1997, 63:3724-3728.
    • (1997) Appl. Environ. Microbiol. , vol.63 , pp. 3724-3728
    • Johansen, C.1    Falholt, P.2    Gram, L.3
  • 36
    • 0016762810 scopus 로고
    • Investigation of errors in direct counts of aquatic bacteria by epi-fluorescence microscopy, with reference to a new method for dyeing membrane filters
    • Jones J.G., Simon B.M. Investigation of errors in direct counts of aquatic bacteria by epi-fluorescence microscopy, with reference to a new method for dyeing membrane filters. J. Appl. Bacteriol. 1975, 39:317-329.
    • (1975) J. Appl. Bacteriol. , vol.39 , pp. 317-329
    • Jones, J.G.1    Simon, B.M.2
  • 37
    • 48049105163 scopus 로고    scopus 로고
    • Techniques for contamination assessment during drilling for terrestrial subsurface sediments
    • Kallmeyer J., Mangelsdorf K., Cragg B.A., Parkes R.J., Horsfield B. Techniques for contamination assessment during drilling for terrestrial subsurface sediments. Geomicrobiol. J. 2006, 23:227-239.
    • (2006) Geomicrobiol. J. , vol.23 , pp. 227-239
    • Kallmeyer, J.1    Mangelsdorf, K.2    Cragg, B.A.3    Parkes, R.J.4    Horsfield, B.5
  • 39
    • 85016927001 scopus 로고    scopus 로고
    • Quantifying global subseafloor microbial abundance: Method and implications
    • Kallmeyer J., Pockalny R., D'Hondt S. Quantifying global subseafloor microbial abundance: Method and implications. Geochim. Cosmochim. Acta 2009, 73:A615.
    • (2009) Geochim. Cosmochim. Acta , vol.73
    • Kallmeyer, J.1    Pockalny, R.2    D'Hondt, S.3
  • 41
    • 44649094537 scopus 로고    scopus 로고
    • Effects of long-term sample storage on the detection of bacterial cells using fluorescence in situ hybridization
    • Keats K.F., Rivkin R.B., Hale M.S., Schneider D.C. Effects of long-term sample storage on the detection of bacterial cells using fluorescence in situ hybridization. Limnol. Oceanogr. Methods 2007, 5:379-383.
    • (2007) Limnol. Oceanogr. Methods , vol.5 , pp. 379-383
    • Keats, K.F.1    Rivkin, R.B.2    Hale, M.S.3    Schneider, D.C.4
  • 43
    • 84859447572 scopus 로고    scopus 로고
    • Distribution, composition and activities of microbial communities in tidal sediments from the surface down to several meters depth
    • Kopke B. Distribution, composition and activities of microbial communities in tidal sediments from the surface down to several meters depth. Fakultät V Mathematik und Naturwissenschaften 2007, 136pp.
    • (2007) Fakultät V Mathematik und Naturwissenschaften , pp. 136
    • Kopke, B.1
  • 44
    • 0029070609 scopus 로고
    • Combined microbial community-level analyses for quality assurance of terrestrial subsurface cores
    • Lehman R.M., Colwell F.S., Ringelberg D.B., White D.C. Combined microbial community-level analyses for quality assurance of terrestrial subsurface cores. J. Microbiol. Methods 1995, 22:263-281.
    • (1995) J. Microbiol. Methods , vol.22 , pp. 263-281
    • Lehman, R.M.1    Colwell, F.S.2    Ringelberg, D.B.3    White, D.C.4
  • 47
    • 2142794629 scopus 로고    scopus 로고
    • Fluorescence microscopy for visualization of soil microorganisms: A review
    • Li Y., Dick W., Tuovinen O. Fluorescence microscopy for visualization of soil microorganisms: A review. Biol. Fertil. Soils 2004, 39:301-311.
    • (2004) Biol. Fertil. Soils , vol.39 , pp. 301-311
    • Li, Y.1    Dick, W.2    Tuovinen, O.3
  • 49
    • 0028985414 scopus 로고
    • Evaluation of methods for extraction of bacteria from soil
    • Lindahl V., Bakken L.R. Evaluation of methods for extraction of bacteria from soil. FEMS Microbiol. Ecol. 1995, 16:135-142.
    • (1995) FEMS Microbiol. Ecol. , vol.16 , pp. 135-142
    • Lindahl, V.1    Bakken, L.R.2
  • 50
    • 20444440388 scopus 로고    scopus 로고
    • An improved method for counting bacteria from sediments and turbid environments by epifluorescence microscopy
    • Lunau M., Lemke A., Walther K., Martens-Habbena W., Simon M. An improved method for counting bacteria from sediments and turbid environments by epifluorescence microscopy. Environ. Microbiol. 2005, 7:961-968.
    • (2005) Environ. Microbiol. , vol.7 , pp. 961-968
    • Lunau, M.1    Lemke, A.2    Walther, K.3    Martens-Habbena, W.4    Simon, M.5
  • 51
    • 78651586257 scopus 로고    scopus 로고
    • Integration of deep biosphere drilling into the International Continental Scientific Drilling Program
    • Mangelsdorf K., Kallmeyer J. Integration of deep biosphere drilling into the International Continental Scientific Drilling Program. Scientific Drill. 2010, 10:46-55.
    • (2010) Scientific Drill. , vol.10 , pp. 46-55
    • Mangelsdorf, K.1    Kallmeyer, J.2
  • 52
    • 71049184134 scopus 로고    scopus 로고
    • Molecular indicators for the occurrence of deep microbial communities at the JAPEX/JNOC/GSC et al. Mallik 5L-38 gas-hydrate production research well
    • Mangelsdorf K., Haberer R.M., Zink K.G., Dieckmann V., Wilkes H., Horsfield B. Molecular indicators for the occurrence of deep microbial communities at the JAPEX/JNOC/GSC et al. Mallik 5L-38 gas-hydrate production research well. Geol. Soc. Can. Bull. 2005, 585:1-9.
    • (2005) Geol. Soc. Can. Bull. , vol.585 , pp. 1-9
    • Mangelsdorf, K.1    Haberer, R.M.2    Zink, K.G.3    Dieckmann, V.4    Wilkes, H.5    Horsfield, B.6
  • 53
    • 23944458436 scopus 로고    scopus 로고
    • Direct in-situ detection of cells in deep-sea sediment cores from the Peru Margin (ODP Leg 201, Site 1229)
    • Mauclaire L., Zepp E., Meister P., McKenzie J.A. Direct in-situ detection of cells in deep-sea sediment cores from the Peru Margin (ODP Leg 201, Site 1229). Geobiology 2004, 2:217-223.
    • (2004) Geobiology , vol.2 , pp. 217-223
    • Mauclaire, L.1    Zepp, E.2    Meister, P.3    McKenzie, J.A.4
  • 54
    • 0030200861 scopus 로고    scopus 로고
    • Application of perfluorocarbon tracers to microbial sampling in subsurface environments using mud-rotary and air-rotary drilling techniques
    • McKinley J.P., Colwell F.S. Application of perfluorocarbon tracers to microbial sampling in subsurface environments using mud-rotary and air-rotary drilling techniques. J. Microbiol. Methods 1996, 26:1-9.
    • (1996) J. Microbiol. Methods , vol.26 , pp. 1-9
    • McKinley, J.P.1    Colwell, F.S.2
  • 55
    • 80052886473 scopus 로고
    • The flourescence-microscopic determination of living and dead spirochetes (Spirochaeta pallida) by means of acridine orange colouration
    • Mohrmann B., Strugger S. The flourescence-microscopic determination of living and dead spirochetes (Spirochaeta pallida) by means of acridine orange colouration. Dermatol. Wochenschr. 1942, 114:669-673.
    • (1942) Dermatol. Wochenschr. , vol.114 , pp. 669-673
    • Mohrmann, B.1    Strugger, S.2
  • 56
    • 0011109994 scopus 로고
    • Occurrence of bacteria in pelagic sediments collected during the Mid-Pacific Expedition
    • Morita R.Y., ZoBell C.E. Occurrence of bacteria in pelagic sediments collected during the Mid-Pacific Expedition. Deep-Sea Research 1955, 3:6-73.
    • (1955) Deep-Sea Research , vol.3 , pp. 6-73
    • Morita, R.Y.1    ZoBell, C.E.2
  • 57
    • 78651588216 scopus 로고    scopus 로고
    • Automatic slide-loader fluorescence microscope for discriminative enumeration of subseafloor life
    • Morono Y., Ingaki F. Automatic slide-loader fluorescence microscope for discriminative enumeration of subseafloor life. Scientific Drill. 2010, 9:32-36.
    • (2010) Scientific Drill. , vol.9 , pp. 32-36
    • Morono, Y.1    Ingaki, F.2
  • 58
    • 67349284715 scopus 로고    scopus 로고
    • Discriminative detection and enumeration of microbial life in marine subsurface sediments
    • Morono Y., Terada T., Masui N., Inagaki F. Discriminative detection and enumeration of microbial life in marine subsurface sediments. ISME J. 2009, 1-9.
    • (2009) ISME J. , pp. 1-9
    • Morono, Y.1    Terada, T.2    Masui, N.3    Inagaki, F.4
  • 60
    • 0025211780 scopus 로고
    • Detergents: An Overview
    • Neugebauer J.M. Detergents: An Overview. Methods Enzymol. 1990, 182:239-253.
    • (1990) Methods Enzymol. , vol.182 , pp. 239-253
    • Neugebauer, J.M.1
  • 61
    • 0001679973 scopus 로고    scopus 로고
    • Use of SYBR Green I for rapid epifluorescence counts of marine viruses and bacteria
    • Noble R.T., Fuhrman J.A. Use of SYBR Green I for rapid epifluorescence counts of marine viruses and bacteria. Aquat. Microbial. Ecol. 1998, 14:113-118.
    • (1998) Aquat. Microbial. Ecol. , vol.14 , pp. 113-118
    • Noble, R.T.1    Fuhrman, J.A.2
  • 62
    • 0032462770 scopus 로고    scopus 로고
    • Observations pertaining to the origin and ecology of microorganisms recovered from the deep subsurface of Taylorsville Basin, Virginia
    • Onstott T.C., Phelps T.J., Colwell F.S., Ringelberg D.B., White D.C., Boone D.R. Observations pertaining to the origin and ecology of microorganisms recovered from the deep subsurface of Taylorsville Basin, Virginia. Geomicrobiology 1998, 15:353-385.
    • (1998) Geomicrobiology , vol.15 , pp. 353-385
    • Onstott, T.C.1    Phelps, T.J.2    Colwell, F.S.3    Ringelberg, D.B.4    White, D.C.5    Boone, D.R.6
  • 65
    • 0029161663 scopus 로고
    • A combined ecological and physiological approach to studying sulphate reduction within deep marine sediment layers
    • Parkes R.J., Cragg B.A., Bale S.J., Goodman K., Fry J.C. A combined ecological and physiological approach to studying sulphate reduction within deep marine sediment layers. J. Microbiol. Methods 1995, 23:235-249.
    • (1995) J. Microbiol. Methods , vol.23 , pp. 235-249
    • Parkes, R.J.1    Cragg, B.A.2    Bale, S.J.3    Goodman, K.4    Fry, J.C.5
  • 66
    • 0347794946 scopus 로고    scopus 로고
    • Recent studies on bacterial populations and processes in subseafloor sediments: A review
    • Parkes R.J., Cragg B.A., Wellsbury P. Recent studies on bacterial populations and processes in subseafloor sediments: A review. Hydrogeol. J. 2000, 8:11-28.
    • (2000) Hydrogeol. J. , vol.8 , pp. 11-28
    • Parkes, R.J.1    Cragg, B.A.2    Wellsbury, P.3
  • 67
    • 0025178066 scopus 로고
    • Distribution and activity of bacteria in deep granitic groundwaters of southeastern Sweden
    • Pedersen K., Ekendahl S. Distribution and activity of bacteria in deep granitic groundwaters of southeastern Sweden. Microb. Ecol. 1990, 20:37-52.
    • (1990) Microb. Ecol. , vol.20 , pp. 37-52
    • Pedersen, K.1    Ekendahl, S.2
  • 68
    • 0030826250 scopus 로고    scopus 로고
    • Investigation of the potential for microbial contamination of deep granitic aquifers during drilling using 16S rRNA gene sequencing and culturing methods
    • Pedersen K., Hallbeck L., Arlinger J., Erlandson J.A.-C., Jahromi N. Investigation of the potential for microbial contamination of deep granitic aquifers during drilling using 16S rRNA gene sequencing and culturing methods. J. Microbiol. Methods 1997, 30:179-192.
    • (1997) J. Microbiol. Methods , vol.30 , pp. 179-192
    • Pedersen, K.1    Hallbeck, L.2    Arlinger, J.3    Erlandson, J.A.-C.4    Jahromi, N.5
  • 69
    • 63949084007 scopus 로고    scopus 로고
    • Seasonal and spatial variability of virio-, bacterio-, and picophytoplanktonic abundances in three peri-alpine lakes
    • Personnic S., Domaizon I., Dorigo U., Berdjeb L., Jacquet S. Seasonal and spatial variability of virio-, bacterio-, and picophytoplanktonic abundances in three peri-alpine lakes. Hydrobiologia 2009, 627:99-116.
    • (2009) Hydrobiologia , vol.627 , pp. 99-116
    • Personnic, S.1    Domaizon, I.2    Dorigo, U.3    Berdjeb, L.4    Jacquet, S.5
  • 71
    • 0028166471 scopus 로고
    • Factors controlling the abundance and metabolic capacities of microorganisms in eastern coastal plain sediments
    • Phelps T.J., Pfiffner S.M., Sargent K.A., White D.C. Factors controlling the abundance and metabolic capacities of microorganisms in eastern coastal plain sediments. Microb. Ecol. 1994, 28:351-364.
    • (1994) Microb. Ecol. , vol.28 , pp. 351-364
    • Phelps, T.J.1    Pfiffner, S.M.2    Sargent, K.A.3    White, D.C.4
  • 72
    • 84986870589 scopus 로고
    • The use of DAPI for identifying and counting aquatic microflora
    • Porter K.G., Feig Y.S. The use of DAPI for identifying and counting aquatic microflora. Limnol. Oceanogr. 1980, 25:943-948.
    • (1980) Limnol. Oceanogr. , vol.25 , pp. 943-948
    • Porter, K.G.1    Feig, Y.S.2
  • 74
    • 85005461036 scopus 로고
    • Procedures for sampling deep subsurface microbial communities in unconsolidated sediments
    • Russell B.F., Phelps T.J., Griffin W.T., Sargent K.A. Procedures for sampling deep subsurface microbial communities in unconsolidated sediments. Groundwat. Monit. Rev. 1992, 12:96-104.
    • (1992) Groundwat. Monit. Rev. , vol.12 , pp. 96-104
    • Russell, B.F.1    Phelps, T.J.2    Griffin, W.T.3    Sargent, K.A.4
  • 76
    • 33747595639 scopus 로고    scopus 로고
    • Comparison of SYBR Green I and SYBR Gold stains for enumerating bacteria and viruses by epifluorescence microscopy
    • Shibata A., Goto Y., Saito H., Kikuchi T., Toda T., Taguchi S. Comparison of SYBR Green I and SYBR Gold stains for enumerating bacteria and viruses by epifluorescence microscopy. Aquat. Microb. Ecol. 2006, 43:223-231.
    • (2006) Aquat. Microb. Ecol. , vol.43 , pp. 223-231
    • Shibata, A.1    Goto, Y.2    Saito, H.3    Kikuchi, T.4    Toda, T.5    Taguchi, S.6
  • 77
    • 61349143076 scopus 로고    scopus 로고
    • Life in subseafloor sediments
    • Smith D.C., D'Hondt S. Life in subseafloor sediments. Oceanography 2006, 19:58-70.
    • (2006) Oceanography , vol.19 , pp. 58-70
    • Smith, D.C.1    D'Hondt, S.2
  • 78
    • 0033830173 scopus 로고    scopus 로고
    • Tracer-based estimates of drilling-induced microbial contamination of deep-sea crust
    • Smith D.C., Spivack A.J., Fisk M.R., Haveman S.A., Staudigel H. Tracer-based estimates of drilling-induced microbial contamination of deep-sea crust. Geomicrobiol. J. 2000, 17:207-219.
    • (2000) Geomicrobiol. J. , vol.17 , pp. 207-219
    • Smith, D.C.1    Spivack, A.J.2    Fisk, M.R.3    Haveman, S.A.4    Staudigel, H.5
  • 79
    • 0012589639 scopus 로고    scopus 로고
    • Methods for quantifying potential microbial contamination during deep ocean drilling
    • Ocean Drilling Program, College Station, TX
    • Smith D.C., Spivack A.J., Fisk M.R., Haveman S.A., Staudigel H., Party O.L.S. Methods for quantifying potential microbial contamination during deep ocean drilling. ODP Technical Notes 2000, Ocean Drilling Program, College Station, TX.
    • (2000) ODP Technical Notes
    • Smith, D.C.1    Spivack, A.J.2    Fisk, M.R.3    Haveman, S.A.4    Staudigel, H.5    Party, O.L.S.6
  • 81
    • 10644294903 scopus 로고    scopus 로고
    • Quantitative analysis of bacterial communities from Mediterranean sapropels based on cultivation-dependent methods
    • Süß J., Engelen B., Cypionka H., Sass H. Quantitative analysis of bacterial communities from Mediterranean sapropels based on cultivation-dependent methods. FEMS Microbiol. Ecol. 2004, 51:109-121.
    • (2004) FEMS Microbiol. Ecol. , vol.51 , pp. 109-121
    • Süß, J.1    Engelen, B.2    Cypionka, H.3    Sass, H.4
  • 82
    • 23944522766 scopus 로고    scopus 로고
    • The deep biosphere is alive and well
    • Teske A. The deep biosphere is alive and well. Trends Microbiol. 2005, 13:402.
    • (2005) Trends Microbiol. , vol.13 , pp. 402
    • Teske, A.1
  • 83
    • 0026564045 scopus 로고
    • Effects of storage on direct estimates of bacterial number of preserved seawater samples
    • Turley C.M., Hughes D.J. Effects of storage on direct estimates of bacterial number of preserved seawater samples. Deep-Sea Res. A Oceanogr. Res. Papers 1992, 39:375-394.
    • (1992) Deep-Sea Res. A Oceanogr. Res. Papers , vol.39 , pp. 375-394
    • Turley, C.M.1    Hughes, D.J.2
  • 84
    • 0028176594 scopus 로고
    • The effect of storage-temperature on the enumeration of epifluorescence-detectable bacterial-cells in sea-water samples
    • Turley C.M., Hughes D.J. The effect of storage-temperature on the enumeration of epifluorescence-detectable bacterial-cells in sea-water samples. J. Mar. Biol. Assoc. U.K. 1994, 74:259-262.
    • (1994) J. Mar. Biol. Assoc. U.K. , vol.74 , pp. 259-262
    • Turley, C.M.1    Hughes, D.J.2
  • 85
    • 0031804014 scopus 로고    scopus 로고
    • Improved most-probable-number method to detect sulfate-reducing bacteria with natural media and a radiotracer
    • Vester F., Ingvorsen K. Improved most-probable-number method to detect sulfate-reducing bacteria with natural media and a radiotracer. Appl. Environ. Microbiol. 1998, 64:1700-1707.
    • (1998) Appl. Environ. Microbiol. , vol.64 , pp. 1700-1707
    • Vester, F.1    Ingvorsen, K.2
  • 86
    • 0344356306 scopus 로고
    • Bacterial numbers in soils, at different depths, and in different seasons of the year
    • Waksman S.A. Bacterial numbers in soils, at different depths, and in different seasons of the year. Soil Sci. 1916, 1:363-380.
    • (1916) Soil Sci. , vol.1 , pp. 363-380
    • Waksman, S.A.1
  • 87
    • 78649674594 scopus 로고    scopus 로고
    • Assessing drilling mud and technical fluid contamination in rock core and brine samples intended for microbiological monitoring at the CO2 storage site in Ketzin using fluorescent dye tracers
    • Wandrey M., Morozova D., Zettlitzer M., Wurdemann H., Grp C.S. Assessing drilling mud and technical fluid contamination in rock core and brine samples intended for microbiological monitoring at the CO2 storage site in Ketzin using fluorescent dye tracers. Int. J. Greenhouse Gas Cont. 2010, 4:972-980.
    • (2010) Int. J. Greenhouse Gas Cont. , vol.4 , pp. 972-980
    • Wandrey, M.1    Morozova, D.2    Zettlitzer, M.3    Wurdemann, H.4    Grp, C.S.5
  • 88
    • 0038497542 scopus 로고
    • Molecular structure of nucleic acids-A structure for deoxyribose nucleic acid
    • Watson J.D., Crick F.H. Molecular structure of nucleic acids-A structure for deoxyribose nucleic acid. Nature 1953, 171:737-738.
    • (1953) Nature , vol.171 , pp. 737-738
    • Watson, J.D.1    Crick, F.H.2
  • 89
    • 0031736602 scopus 로고    scopus 로고
    • Utility of green fluorescent nucleic acid dyes and aluminum oxide membrane filters for rapid epifluorescence enumeration of soil and sediment bacteria
    • Weinbauer M.G., Beckmann C., Höfle M.G. Utility of green fluorescent nucleic acid dyes and aluminum oxide membrane filters for rapid epifluorescence enumeration of soil and sediment bacteria. Appl. Environ. Microbiol. 1998, 64:5000-5003.
    • (1998) Appl. Environ. Microbiol. , vol.64 , pp. 5000-5003
    • Weinbauer, M.G.1    Beckmann, C.2    Höfle, M.G.3
  • 90
    • 0022847017 scopus 로고
    • Evidence for sulfate-reducing and methane producing microorganisms in sediments from sites 618, 619, and 622
    • Whelan J.K., Oremland R., Tarafa M., Smith R., Howarth R., Lee C. Evidence for sulfate-reducing and methane producing microorganisms in sediments from sites 618, 619, and 622. ODP 1985, 767-775.
    • (1985) ODP , pp. 767-775
    • Whelan, J.K.1    Oremland, R.2    Tarafa, M.3    Smith, R.4    Howarth, R.5    Lee, C.6
  • 93
    • 0028829187 scopus 로고
    • Microbiology to 10,500 meters in the deep sea
    • Yayanos A.A. Microbiology to 10,500 meters in the deep sea. Annu. Rev. Microbiol. 1995, 49:777-805.
    • (1995) Annu. Rev. Microbiol. , vol.49 , pp. 777-805
    • Yayanos, A.A.1
  • 94
    • 0020641114 scopus 로고
    • Death of a Hadal deep-sea bacterium after decompression
    • Yayanos A., Dietz A.S. Death of a Hadal deep-sea bacterium after decompression. Science 1983, 220:497-498.
    • (1983) Science , vol.220 , pp. 497-498
    • Yayanos, A.1    Dietz, A.S.2
  • 95
    • 0342573653 scopus 로고
    • Bacterial life at the bottom of the Phillipine Trench
    • ZoBell C.E. Bacterial life at the bottom of the Phillipine Trench. Science 1952, 115:507-508.
    • (1952) Science , vol.115 , pp. 507-508
    • ZoBell, C.E.1
  • 96
    • 0000072283 scopus 로고
    • Growth, reproduction, and death rates of Escherichia coli at increased hydrostatic pressures
    • Zobell C.E., Cobet A.B. Growth, reproduction, and death rates of Escherichia coli at increased hydrostatic pressures. J. Bacteriol. 1962, 84:1228-1236.
    • (1962) J. Bacteriol. , vol.84 , pp. 1228-1236
    • Zobell, C.E.1    Cobet, A.B.2


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