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Volumn 21, Issue 17, 2011, Pages

Uncovering new functions for MicroRNAs in caenorhabditis elegans

Author keywords

[No Author keywords available]

Indexed keywords

MESSENGER RNA; MICRORNA;

EID: 80052795484     PISSN: 09609822     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.cub.2011.07.027     Document Type: Review
Times cited : (32)

References (39)
  • 1
    • 0027751663 scopus 로고
    • The C. elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14
    • DOI 10.1016/0092-8674(93)90529-Y
    • R.C. Lee, R.L. Feinbaum, and V. Ambros The C. elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14 Cell 75 1993 843 854 (Pubitemid 24014542)
    • (1993) Cell , vol.75 , Issue.5 , pp. 843-854
    • Lee, R.C.1    Feinbaum, R.L.2    Ambros, V.3
  • 4
    • 24144494563 scopus 로고    scopus 로고
    • The let-7 MicroRNA family members mir-48, mir-84, and mir-241 function together to regulate developmental timing in Caenorhabditis elegans
    • DOI 10.1016/j.devcel.2005.07.009, PII S1534580705002893
    • A.L. Abbott, E. Alvarez-Saavedra, E.A. Miska, N.C. Lau, D.P. Bartel, H.R. Horvitz, and V. Ambros The let-7 microRNA family members mir-48, mir-84, and mir-241 function together to regulate developmental timing in Caenorhabditis elegans Dev. Cell 9 2005 403 414 (Pubitemid 41235809)
    • (2005) Developmental Cell , vol.9 , Issue.3 , pp. 403-414
    • Abbott, A.L.1    Alvarez-Saavedra, E.2    Miska, E.A.3    Lau, N.C.4    Bartel, D.P.5    Horvitz, H.R.6    Ambros, V.7
  • 5
    • 76749134307 scopus 로고    scopus 로고
    • Many families of C. elegans microRNAs are not essential for development or viability
    • E. Alvarez-Saavedra, and H.R. Horvitz Many families of C. elegans microRNAs are not essential for development or viability Curr. Biol. 20 2010 367 373
    • (2010) Curr. Biol. , vol.20 , pp. 367-373
    • Alvarez-Saavedra, E.1    Horvitz, H.R.2
  • 6
    • 0347357618 scopus 로고    scopus 로고
    • A microRNA controlling left/right neuronal asymmetry in Caenorhabditis elegans
    • DOI 10.1038/nature02255
    • R.J. Johnston, and O. Hobert A microRNA controlling left/right neuronal asymmetry in Caenorhabditis elegans Nature 426 2003 845 849 (Pubitemid 38056870)
    • (2003) Nature , vol.426 , Issue.6968 , pp. 845-849
    • Johnston Jr., R.J.1    Hobert, O.2
  • 7
    • 84984765621 scopus 로고    scopus 로고
    • Canalization of development by microRNAs
    • E. Hornstein, and N. Shomron Canalization of development by microRNAs Nat. Gen. 38 2006 S20 24
    • (2006) Nat. Gen. , vol.38 , pp. 20-24
    • Hornstein, E.1    Shomron, N.2
  • 8
    • 79551627496 scopus 로고    scopus 로고
    • A parsimonious model for gene regulation by miRNAs
    • S. Djuranovic, A. Nahvi, and R. Green A parsimonious model for gene regulation by miRNAs Science 331 2011 550 553
    • (2011) Science , vol.331 , pp. 550-553
    • Djuranovic, S.1    Nahvi, A.2    Green, R.3
  • 9
    • 58249088751 scopus 로고    scopus 로고
    • MicroRNAs: Target recognition and regulatory functions
    • D.P. Bartel MicroRNAs: target recognition and regulatory functions Cell 136 2009 215 233
    • (2009) Cell , vol.136 , pp. 215-233
    • Bartel, D.P.1
  • 10
    • 50849141708 scopus 로고    scopus 로고
    • MirWIP: MicroRNA target prediction based on microRNA-containing ribonucleoprotein-enriched transcripts
    • M. Hammell, D. Long, L. Zhang, A. Lee, C.S. Carmack, M. Han, Y. Ding, and V. Ambros mirWIP: microRNA target prediction based on microRNA-containing ribonucleoprotein-enriched transcripts Nat. Methods 5 2008 813 819
    • (2008) Nat. Methods , vol.5 , pp. 813-819
    • Hammell, M.1    Long, D.2    Zhang, L.3    Lee, A.4    Carmack, C.S.5    Han, M.6    Ding, Y.7    Ambros, V.8
  • 12
    • 33845436047 scopus 로고    scopus 로고
    • Large-Scale Sequencing Reveals 21U-RNAs and Additional MicroRNAs and Endogenous siRNAs in C. elegans
    • DOI 10.1016/j.cell.2006.10.040, PII S0092867406014681
    • J.G. Ruby, C. Jan, C. Player, M.J. Axtell, W. Lee, C. Nusbaum, H. Ge, and D.P. Bartel Large-scale sequencing reveals 21U-RNAs and additional microRNAs and endogenous siRNAs in C. elegans Cell 127 2006 1193 1207 (Pubitemid 44894525)
    • (2006) Cell , vol.127 , Issue.6 , pp. 1193-1207
    • Ruby, J.G.1    Jan, C.2    Player, C.3    Axtell, M.J.4    Lee, W.5    Nusbaum, C.6    Ge, H.7    Bartel, D.P.8
  • 14
    • 79954549922 scopus 로고    scopus 로고
    • Prediction of microRNA targets in Caenorhabditis elegans using a self-organizing map
    • L. Heikkinen, M. Kolehmainen, and G. Wong Prediction of microRNA targets in Caenorhabditis elegans using a self-organizing map Bioinformatics 27 2011 1247 1254
    • (2011) Bioinformatics , vol.27 , pp. 1247-1254
    • Heikkinen, L.1    Kolehmainen, M.2    Wong, G.3
  • 15
    • 36249012075 scopus 로고    scopus 로고
    • Systematic Identification of C. elegans miRISC Proteins, miRNAs, and mRNA Targets by Their Interactions with GW182 Proteins AIN-1 and AIN-2
    • DOI 10.1016/j.molcel.2007.09.014, PII S1097276507006260
    • L. Zhang, L. Ding, T.H. Cheung, M.Q. Dong, J. Chen, A.K. Sewell, X. Liu, J.R. Yates, and M. Han Systematic identification of C. elegans miRISC proteins, miRNAs, and mRNA targets by their interactions with GW182 proteins AIN-1 and AIN-2 Mol. Cell 28 2007 598 613 (Pubitemid 350137791)
    • (2007) Molecular Cell , vol.28 , Issue.4 , pp. 598-613
    • Zhang, L.1    Ding, L.2    Cheung, T.H.3    Dong, M.-Q.4    Chen, J.5    Sewell, A.K.6    Liu, X.7    Yates III, J.R.8    Han, M.9
  • 16
    • 70350038073 scopus 로고    scopus 로고
    • Systematic analysis of dynamic miRNA-target interactions during C. elegans development
    • L. Zhang, M. Hammell, B.A. Kudlow, V. Ambros, and M. Han Systematic analysis of dynamic miRNA-target interactions during C. elegans development Development 136 2009 3043 3055
    • (2009) Development , vol.136 , pp. 3043-3055
    • Zhang, L.1    Hammell, M.2    Kudlow, B.A.3    Ambros, V.4    Han, M.5
  • 19
    • 78650972252 scopus 로고    scopus 로고
    • Formation, regulation and evolution of Caenorhabditis elegans 3′ UTRs
    • C.H. Jan, R.C. Friedman, J.G. Ruby, and D.P. Bartel Formation, regulation and evolution of Caenorhabditis elegans 3′ UTRs Nature 469 2011 97 101
    • (2011) Nature , vol.469 , pp. 97-101
    • Jan, C.H.1    Friedman, R.C.2    Ruby, J.G.3    Bartel, D.P.4
  • 21
    • 77956179557 scopus 로고    scopus 로고
    • The conserved miR-51 microRNA family is redundantly required for embryonic development and pharynx attachment in Caenorhabditis elegans
    • W.R. Shaw, J. Armisen, N.J. Lehrbach, and E.A. Miska The conserved miR-51 microRNA family is redundantly required for embryonic development and pharynx attachment in Caenorhabditis elegans Genetics 185 2010 897 905
    • (2010) Genetics , vol.185 , pp. 897-905
    • Shaw, W.R.1    Armisen, J.2    Lehrbach, N.J.3    Miska, E.A.4
  • 22
    • 33846085944 scopus 로고    scopus 로고
    • The mir-84 and let-7 paralogous microRNA genes of Caenorhabditis elegans direct the cessation of molting via the conserved nuclear hormone receptors NHR-23 and NHR-25
    • DOI 10.1242/dev.02655
    • G.D. Hayes, A.R. Frand, and G. Ruvkun The mir-84 and let-7 paralogous microRNA genes of Caenorhabditis elegans direct the cessation of molting via the conserved nuclear hormone receptors NHR-23 and NHR-25 Development 133 2006 4631 4641 (Pubitemid 46063076)
    • (2006) Development , vol.133 , Issue.23 , pp. 4631-4641
    • Hayes, G.D.1    Frand, A.R.2    Ruvkun, G.3
  • 23
    • 77957756295 scopus 로고    scopus 로고
    • Loss of individual microRNAs causes mutant phenotypes in sensitized genetic backgrounds in C. elegans
    • J.L. Brenner, K.L. Jasiewicz, A.F. Fahley, B.J. Kemp, and A.L. Abbott Loss of individual microRNAs causes mutant phenotypes in sensitized genetic backgrounds in C. elegans Curr. Biol. 20 2010 1321 1325
    • (2010) Curr. Biol. , vol.20 , pp. 1321-1325
    • Brenner, J.L.1    Jasiewicz, K.L.2    Fahley, A.F.3    Kemp, B.J.4    Abbott, A.L.5
  • 24
    • 29344467120 scopus 로고    scopus 로고
    • Physiology: A developmental timing microRNA and its target regulate life span in C. elegans
    • DOI 10.1126/science.1115596
    • M. Boehm, and F. Slack A developmental timing microRNA and its target regulate life span in C. elegans Science 310 2005 1954 1957 (Pubitemid 43005988)
    • (2005) Science , vol.310 , Issue.5756 , pp. 1954-1957
    • Boehm, M.1    Slack, F.2
  • 25
    • 33744485559 scopus 로고    scopus 로고
    • Modulated microRNA expression during adult lifespan in Caenorhabditis elegans
    • DOI 10.1111/j.1474-9726.2006.00210.x
    • C. Ibáñez-Ventoso, M. Yang, S. Guo, H. Robins, R.W. Padgett, and M. Driscoll Modulated microRNA expression during adult lifespan in Caenorhabditis elegans Aging Cell 5 2006 235 246 (Pubitemid 43805613)
    • (2006) Aging Cell , vol.5 , Issue.3 , pp. 235-246
    • Ibanez-Ventoso, C.1    Yang, M.2    Guo, S.3    Robins, H.4    Padgett, R.W.5    Driscoll, M.6
  • 27
    • 79952995309 scopus 로고    scopus 로고
    • Effect of life history on microRNA expression during C. elegans development
    • X. Karp, M. Hammell, M.C. Ow, and V. Ambros Effect of life history on microRNA expression during C. elegans development RNA 17 2011 639 651
    • (2011) RNA , vol.17 , pp. 639-651
    • Karp, X.1    Hammell, M.2    Ow, M.C.3    Ambros, V.4
  • 29
    • 77954394167 scopus 로고    scopus 로고
    • The microRNA miR-124 controls gene expression in the sensory nervous system of Caenorhabditis elegans
    • A.M. Clark, L.D. Goldstein, M. Tevlin, S. Tavaré, S. Shaham, and E.A. Miska The microRNA miR-124 controls gene expression in the sensory nervous system of Caenorhabditis elegans Nucleic. Acids Res. 38 2010 3780 3793
    • (2010) Nucleic. Acids Res. , vol.38 , pp. 3780-3793
    • Clark, A.M.1    Goldstein, L.D.2    Tevlin, M.3    Tavaré, S.4    Shaham, S.5    Miska, E.A.6
  • 30
    • 78049430042 scopus 로고    scopus 로고
    • A negative regulatory loop between microRNA and Hox gene controls posterior identities in Caenorhabditis elegans
    • Z. Zhao, T.J. Boyle, Z. Liu, J.I. Murray, W.B. Wood, and R.H. Waterston A negative regulatory loop between microRNA and Hox gene controls posterior identities in Caenorhabditis elegans PLoS Genet. 6 2010 e1001089
    • (2010) PLoS Genet. , vol.6 , pp. 1001089
    • Zhao, Z.1    Boyle, T.J.2    Liu, Z.3    Murray, J.I.4    Wood, W.B.5    Waterston, R.H.6
  • 31
    • 0024963695 scopus 로고
    • A hierarchy of regulatory genes controls a larva-to-adult developmental switch in C. elegans
    • V. Ambros A hierarchy of regulatory genes controls a larva-to-adult developmental switch in C. elegans Cell 57 1989 49 57
    • (1989) Cell , vol.57 , pp. 49-57
    • Ambros, V.1
  • 32
    • 0030970775 scopus 로고    scopus 로고
    • The cold shock domain protein LIN-28 controls developmental timing in C. elegans and is regulated by the lin-4 RNA
    • DOI 10.1016/S0092-8674(00)81906-6
    • E.G. Moss, R.C. Lee, and V. Ambros The cold shock domain protein LIN-28 controls developmental timing in C. elegans and is regulated by the lin-4 RNA Cell 88 1997 637 646 (Pubitemid 27152406)
    • (1997) Cell , vol.88 , Issue.5 , pp. 637-646
    • Moss, E.G.1    Lee, R.C.2    Ambros, V.3
  • 33
    • 77957341454 scopus 로고    scopus 로고
    • A developmental timing switch promotes axon outgrowth independent of known guidance receptors
    • K. Olsson-Carter, and F.J. Slack A developmental timing switch promotes axon outgrowth independent of known guidance receptors PLoS Genet. 6 2010 e1001054
    • (2010) PLoS Genet. , vol.6 , pp. 1001054
    • Olsson-Carter, K.1    Slack, F.J.2
  • 34
    • 0027730383 scopus 로고
    • Posttranscriptional regulation of the heterochronic gene lin-14 by lin-4 mediates temporal pattern formation in C. elegans
    • DOI 10.1016/0092-8674(93)90530-4
    • B. Wightman, I. Ha, and G. Ruvkun Posttranscriptional regulation of the heterochronic gene lin-14 by lin-4 mediates temporal pattern formation in C. elegans Cell 75 1993 855 862 (Pubitemid 24014543)
    • (1993) Cell , vol.75 , Issue.5 , pp. 855-862
    • Wightman, B.1    Ha, I.2    Ruvkun, G.3
  • 35
    • 0038708326 scopus 로고    scopus 로고
    • The Caenorhabditis elegans hunchback-like gene lin-57/hbl-1 controls developmental time and is regulated by microRNAs
    • DOI 10.1016/S1534-5807(03)00127-8, PII S1534580703001278
    • J.E. Abrahante, A.L. Daul, M. Li, M.L. Volk, J.M. Tennessen, E.A. Miller, and A.E. Rougvie The Caenorhabditis elegans hunchback-like gene lin-57/hbl-1 controls developmental time and is regulated by microRNAs Dev. Cell 4 2003 625 637 (Pubitemid 36564894)
    • (2003) Developmental Cell , vol.4 , Issue.5 , pp. 625-637
    • Abrahante, J.E.1    Daul, A.L.2    Li, M.3    Volk, M.L.4    Tennessen, J.M.5    Miller, E.A.6    Rougvie, A.E.7
  • 36
    • 14644398601 scopus 로고    scopus 로고
    • The temporal patterning microRNA let-7 regulates several transcription factors at the larval to adult transition in C. elegans
    • DOI 10.1016/j.devcel.2004.12.019, PII S1534580705000122
    • H. Grosshans, T. Johnson, K.L. Reinert, M. Gerstein, and F.J. Slack The temporal patterning microRNA let-7 regulates several transcription factors at the larval to adult transition in C. elegans Dev. Cell 8 2005 321 330 (Pubitemid 40309803)
    • (2005) Developmental Cell , vol.8 , Issue.3 , pp. 321-330
    • Grosshans, H.1    Johnson, T.2    Reinert, K.L.3    Gerstein, M.4    Slack, F.J.5
  • 38
    • 0037693842 scopus 로고    scopus 로고
    • The C. elegans hunchback homolog, hbl-1, controls temporal patterning and is a probable MicroRNA target
    • DOI 10.1016/S1534-5807(03)00124-2, PII S1534580703001242
    • S.-Y. Lin, S.M. Johnson, M. Abraham, M.C. Vella, A. Pasquinelli, C. Gamberi, E. Gottlieb, and F.J. Slack The C. elegans hunchback homolog, hbl-1, controls temporal patterning and is a probable microRNA target Dev. Cell 4 2003 639 650 (Pubitemid 36564895)
    • (2003) Developmental Cell , vol.4 , Issue.5 , pp. 639-650
    • Lin, S.-Y.1    Johnson, S.M.2    Abraham, M.3    Vella, M.C.4    Pasquinelli, A.5    Gamberi, C.6    Gottlieb, E.7    Slack, F.J.8
  • 39
    • 43949104827 scopus 로고    scopus 로고
    • The MicroRNA miR-1 Regulates a MEF-2-Dependent Retrograde Signal at Neuromuscular Junctions
    • DOI 10.1016/j.cell.2008.04.035, PII S0092867408006090
    • D.J. Simon, J.M. Madison, A.L. Conery, K.L. Thompson-Peer, M. Soskis, G.B. Ruvkun, J.M. Kaplan, and J.K. Kim The microRNA miR-1 regulates a MEF-2-dependent retrograde signal at neuromuscular junctions Cell 133 2008 903 915 (Pubitemid 351707687)
    • (2008) Cell , vol.133 , Issue.5 , pp. 903-915
    • Simon, D.J.1    Madison, J.M.2    Conery, A.L.3    Thompson-Peer, K.L.4    Soskis, M.5    Ruvkun, G.B.6    Kaplan, J.M.7    Kim, J.K.8


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.