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Volumn 323, Issue 1, 2011, Pages 1-12

Facultative methanotrophy: False leads, true results, and suggestions for future research

Author keywords

Gene regulation; Metabolism; Pollutant degradation

Indexed keywords

ACETIC ACID; CARBON; FORMALDEHYDE; GLYOXYLIC ACID; MALIC ACID; N METHYLASPARTIC ACID;

EID: 80052727912     PISSN: 03781097     EISSN: 15746968     Source Type: Journal    
DOI: 10.1111/j.1574-6968.2011.02315.x     Document Type: Short Survey
Times cited : (93)

References (61)
  • 1
    • 78651104413 scopus 로고    scopus 로고
    • Biotechnological potential of the ethylmalonyl-CoA pathway
    • Alber BE (2011) Biotechnological potential of the ethylmalonyl-CoA pathway. Appl Microbiol Biot89: 17-25.
    • (2011) Appl Microbiol Biot , vol.89 , pp. 17-25
    • Alber, B.E.1
  • 2
    • 0029636672 scopus 로고
    • Transport of lactate and acetate through the energized cytoplasmic membrane of Escherichia coli
    • Axe DE & Bailey JE (1995) Transport of lactate and acetate through the energized cytoplasmic membrane of Escherichia coli. Biotechnol Bioeng47: 8-19.
    • (1995) Biotechnol Bioeng , vol.47 , pp. 8-19
    • Axe, D.E.1    Bailey, J.E.2
  • 4
    • 65349196100 scopus 로고    scopus 로고
    • Enzymes of the citramalate cycle in Rhodospirillum rubrum
    • Berg IA & Ivanovsky RN (2009) Enzymes of the citramalate cycle in Rhodospirillum rubrum. Microbiology78: 16-24.
    • (2009) Microbiology , vol.78 , pp. 16-24
    • Berg, I.A.1    Ivanovsky, R.N.2
  • 5
    • 0003238763 scopus 로고    scopus 로고
    • The methanotrophs - the families Methylococcaceae and Methylocystaceae
    • Springer, New York
    • Bowman J (2006) The methanotrophs - the families Methylococcaceae and Methylocystaceae. Prokaryotes, Vol. 5, pp. 266-289. Springer, New York.
    • (2006) Prokaryotes , vol.5 , pp. 266-289
    • Bowman, J.1
  • 6
    • 0028872204 scopus 로고
    • The phylogenetic position of the family Methylococcaceae
    • Bowman JP, Sly LI & Stackebrandt E (1995) The phylogenetic position of the family Methylococcaceae. Int J Syst Bacteriol45: 182-185.
    • (1995) Int J Syst Bacteriol , vol.45 , pp. 182-185
    • Bowman, J.P.1    Sly, L.I.2    Stackebrandt, E.3
  • 7
    • 0347758928 scopus 로고
    • The isolation and characterization of Methanomonas methanooxidans Brown and Strawiniski
    • Brown LR, Strawinski RJ & McCleskey CS (1964) The isolation and characterization of Methanomonas methanooxidans Brown and Strawiniski. Can J Microbiol10: 791-799.
    • (1964) Can J Microbiol , vol.10 , pp. 791-799
    • Brown, L.R.1    Strawinski, R.J.2    McCleskey, C.S.3
  • 9
    • 77954251726 scopus 로고    scopus 로고
    • γ-Glutamethylamide is an essential intermediate in the metabolism of methylamine by Methylocella silvestris
    • Chen Y, Scanlan S, Song L, Crombie A, Rahman MT, Schäfer H & Murrell JC (2010b) γ-Glutamethylamide is an essential intermediate in the metabolism of methylamine by Methylocella silvestris. Appl Environ Microb76: 4530-4537.
    • (2010) Appl Environ Microb , vol.76 , pp. 4530-4537
    • Chen, Y.1    Scanlan, S.2    Song, L.3    Crombie, A.4    Rahman, M.T.5    Schäfer, H.6    Murrell, J.C.7
  • 10
    • 34249812080 scopus 로고    scopus 로고
    • Genome of Methylobacillus flagellatus, molecular basis for obligate methylotrophy, and polyphyletic origin of methylotrophy
    • Chistoserdova L, Lapidus A, Han Cet al. (2007) Genome of Methylobacillus flagellatus, molecular basis for obligate methylotrophy, and polyphyletic origin of methylotrophy. J Bacteriol189: 4020-4027.
    • (2007) J Bacteriol , vol.189 , pp. 4020-4027
    • Chistoserdova, L.1    Lapidus, A.2    Han, C.3
  • 12
    • 79952778111 scopus 로고    scopus 로고
    • Development of a system for genetic manipulation of the facultative methanotroph Methylocella silvestris BL2
    • Crombie A & Murrell JC (2011) Development of a system for genetic manipulation of the facultative methanotroph Methylocella silvestris BL2. Method Enzymol495B: 119-133.
    • (2011) Method Enzymol , vol.495 , pp. 119-133
    • Crombie, A.1    Murrell, J.C.2
  • 14
    • 71549170264 scopus 로고    scopus 로고
    • Exploring methanotroph diversity in acidic northern wetlands
    • Microbiology
    • Dedysh SN (2009) Exploring methanotroph diversity in acidic northern wetlands: molecular and cultivation-based studies. Microbiology 78: 655-669.
    • (2009) molecular and cultivation-based studies , vol.78 , pp. 655-669
    • Dedysh, S.N.1
  • 16
  • 17
    • 0031909608 scopus 로고    scopus 로고
    • Acidophilic methanotrophic communities from Sphagnum peat bogs
    • Dedysh SN, Panikov NS & Tiedje JM (1998b) Acidophilic methanotrophic communities from Sphagnum peat bogs. Appl Environ Microb64: 922-929.
    • (1998) Appl Environ Microb , vol.64 , pp. 922-929
    • Dedysh, S.N.1    Panikov, N.S.2    Tiedje, J.M.3
  • 18
    • 0036151243 scopus 로고    scopus 로고
    • Methylocapsa acidiphila gen. nov., sp. nov., a novel methane-oxidizing and dinitrogen-fixing acidophilic bacterium from Sphagnum bog
    • Dedysh SN, Khmelenina VN, Suzina NE, Trotsenko YA, Semrau JD, Liesack W & Tiedje JM (2002) Methylocapsa acidiphila gen. nov., sp. nov., a novel methane-oxidizing and dinitrogen-fixing acidophilic bacterium from Sphagnum bog. Intl J Syst Evol Micr52: 2561-2661.
    • (2002) Intl J Syst Evol Micr , vol.52 , pp. 2561-2661
    • Dedysh, S.N.1    Khmelenina, V.N.2    Suzina, N.E.3    Trotsenko, Y.A.4    Semrau, J.D.5    Liesack, W.6    Tiedje, J.M.7
  • 21
    • 21144452445 scopus 로고    scopus 로고
    • Methylocella species are facultatively methanotrophic
    • Dedysh SN, Knief C & Dunfield PF (2005) Methylocella species are facultatively methanotrophic. J Bacteriol187: 4665-4670.
    • (2005) J Bacteriol , vol.187 , pp. 4665-4670
    • Dedysh, S.N.1    Knief, C.2    Dunfield, P.F.3
  • 23
    • 84890144621 scopus 로고    scopus 로고
    • The soil methane sink
    • ReayDS, HewittCN, SmithKA & GraceJ, eds) CAB International, Wallingford
    • Dunfield P (2007) The soil methane sink. Greenhouse Gas Sinks (Reay DS, Hewitt CN, Smith KA & Grace J, eds), pp. 152-170. CAB International, Wallingford.
    • (2007) Greenhouse Gas Sinks , pp. 152-170
    • Dunfield, P.1
  • 25
    • 77956297478 scopus 로고    scopus 로고
    • Methylocapsa aurea sp. nov., a facultative methanotroph possessing a particulate methane monooxygenase and emended description of the genus Methylocapsa
    • Dunfield PF, Belova SE, Vorob'ev AV, Cornish SL & Dedysh SN (2010) Methylocapsa aurea sp. nov., a facultative methanotroph possessing a particulate methane monooxygenase and emended description of the genus Methylocapsa. Int J Syst Evol Micr60: 2659-2664.
    • (2010) Int J Syst Evol Micr , vol.60 , pp. 2659-2664
    • Dunfield, P.F.1    Belova, S.E.2    Vorob'ev, A.V.3    Cornish, S.L.4    Dedysh, S.N.5
  • 26
    • 0042231215 scopus 로고
    • Studies on Pseudomonas methanica (Söhngen) nov. comb
    • Dworkin M & Foster JW (1956) Studies on Pseudomonas methanica (Söhngen) nov. comb. J Bacteriol72: 646-659.
    • (1956) J Bacteriol , vol.72 , pp. 646-659
    • Dworkin, M.1    Foster, J.W.2
  • 28
    • 70350165195 scopus 로고    scopus 로고
    • [2S]-Methylsuccinyl-CoA dehydrogenase closes the ethylmalonyl-CoA pathway for acetyl-CoA assimilation
    • Erb TJ, Fuchs G & Alber BE (2009) [2S]-Methylsuccinyl-CoA dehydrogenase closes the ethylmalonyl-CoA pathway for acetyl-CoA assimilation. Mol Microbiol73: 992-1008.
    • (2009) Mol Microbiol , vol.73 , pp. 992-1008
    • Erb, T.J.1    Fuchs, G.2    Alber, B.E.3
  • 29
    • 77950258771 scopus 로고    scopus 로고
    • Nitrite-driven anaerobic methane oxidation by oxygenic bacteria
    • Ettwig K, Butler MK, Le Paslier Det al. (2010) Nitrite-driven anaerobic methane oxidation by oxygenic bacteria. Nature464: 543-548.
    • (2010) Nature , vol.464 , pp. 543-548
    • Ettwig, K.1    Butler, M.K.2    Le Paslier, D.3
  • 30
    • 0013912623 scopus 로고
    • A methane-dependent coccus, with notes on classification and nomenclature of obligate, methane-utilizing bacteria
    • Foster JW & Davis RH (1966) A methane-dependent coccus, with notes on classification and nomenclature of obligate, methane-utilizing bacteria. J Bacteriol91: 1924-1931.
    • (1966) J Bacteriol , vol.91 , pp. 1924-1931
    • Foster, J.W.1    Davis, R.H.2
  • 31
    • 10744225021 scopus 로고    scopus 로고
    • The gene yjcG, cotranscribed with the gene acs, encodes an acetate permease in Escherichia coli
    • Gimenez R, Nuñez MF, Badia J, Aguilar J & Baldoma L (2003) The gene yjcG, cotranscribed with the gene acs, encodes an acetate permease in Escherichia coli. J Bacteriol185: 6448-6455.
    • (2003) J Bacteriol , vol.185 , pp. 6448-6455
    • Gimenez, R.1    Nuñez, M.F.2    Badia, J.3    Aguilar, J.4    Baldoma, L.5
  • 32
    • 0001236688 scopus 로고
    • Emendation of Methylobacterium Patt, Cole, and Hanson 1976; Methylobacterium rhodinum (Heumann 1962) comb. nov. corrig.; Methylobacteriumradiotolerans (Ito and Iizuka 1971) comb. nov. corrig.; and Methylobacteriummesophilicum (Austin and Goodfellow 1979) comb. nov. (1983)
    • Green PN & Bousfield IJ (1983) Emendation of Methylobacterium Patt, Cole, and Hanson 1976; Methylobacterium rhodinum (Heumann 1962) comb. nov. corrig.; Methylobacteriumradiotolerans (Ito and Iizuka 1971) comb. nov. corrig.; and Methylobacteriummesophilicum (Austin and Goodfellow 1979) comb. nov. (1983). Int J Syst Bacteriol33: 875-877.
    • (1983) Int J Syst Bacteriol , vol.33 , pp. 875-877
    • Green, P.N.1    Bousfield, I.J.2
  • 33
    • 48249105854 scopus 로고    scopus 로고
    • Complete genome sequence of the extremely acidophilic methanotroph isolate V4, Methylacidiphilum infernorum, a representative of the bacterial phylum Verrucomicrobia
    • Hou S, Makarova KS, Saw JHet al. (2008) Complete genome sequence of the extremely acidophilic methanotroph isolate V4, Methylacidiphilum infernorum, a representative of the bacterial phylum Verrucomicrobia. Biol Direct3: 26.
    • (2008) Biol Direct , vol.3 , pp. 26
    • Hou, S.1    Makarova, K.S.2    Saw, J.H.3
  • 34
    • 0032924783 scopus 로고    scopus 로고
    • (R)-Citramalate synthase in methanogenic archaea
    • Howell DM, Xu H & White RH (1999) (R)-Citramalate synthase in methanogenic archaea. J Bacteriol181: 331-333.
    • (1999) J Bacteriol , vol.181 , pp. 331-333
    • Howell, D.M.1    Xu, H.2    White, R.H.3
  • 35
    • 79953761223 scopus 로고    scopus 로고
    • Pollutant degradation by Methylocystis strain SB2 grown on ethanol
    • FEMS Microbiol Lett
    • Im J & Semrau JD (2011) Pollutant degradation by Methylocystis strain SB2 grown on ethanol: bioremediation via facultative methanotrophy. FEMS Microbiol Lett 318: 137-142.
    • (2011) bioremediation via facultative methanotrophy , vol.318 , pp. 137-142
    • Im, J.1    Semrau, J.D.2
  • 36
    • 78649514984 scopus 로고    scopus 로고
    • Characterization of a novel facultative Methylocystis species capable of growth on methane, ethanol, and acetate
    • Im J, Lee S-W, Yoon S, DiSpirito AA & Semrau JD (2011) Characterization of a novel facultative Methylocystis species capable of growth on methane, ethanol, and acetate. Environ Microbiol Rep3: 174-181.
    • (2011) Environ Microbiol Rep , vol.3 , pp. 174-181
    • Im, J.1    Lee, S.-W.2    Yoon, S.3    DiSpirito, A.A.4    Semrau, J.D.5
  • 38
    • 76649101991 scopus 로고    scopus 로고
    • The quest for atmospheric methane oxidizers in forest soils
    • Kolb S (2009) The quest for atmospheric methane oxidizers in forest soils. Environ Microbiol Rep1: 336-346.
    • (2009) Environ Microbiol Rep , vol.1 , pp. 336-346
    • Kolb, S.1
  • 39
    • 0002060882 scopus 로고
    • Studies on some methane utilizing bacteria
    • Leadbetter ER & Foster JW (1958) Studies on some methane utilizing bacteria. Arch Mikrobiol30: 91-118.
    • (1958) Arch Mikrobiol , vol.30 , pp. 91-118
    • Leadbetter, E.R.1    Foster, J.W.2
  • 41
    • 0345646325 scopus 로고
    • Characterization of two new facultative methanotrophs
    • Lynch MJ, Wopat AE & O'Connor ML (1980) Characterization of two new facultative methanotrophs. Appl Environ Microb40: 400-407.
    • (1980) Appl Environ Microb , vol.40 , pp. 400-407
    • Lynch, M.J.1    Wopat, A.E.2    O'Connor, M.L.3
  • 44
    • 0016124132 scopus 로고
    • Isolation and characterization of bacteria that grow on methane and organic compounds as sole sources of carbon and energy
    • Patt TE, Cole GC, Bland J & Hanson RS (1974) Isolation and characterization of bacteria that grow on methane and organic compounds as sole sources of carbon and energy. J Bacteriol120: 955-964.
    • (1974) J Bacteriol , vol.120 , pp. 955-964
    • Patt, T.E.1    Cole, G.C.2    Bland, J.3    Hanson, R.S.4
  • 45
    • 0001300695 scopus 로고
    • Methylobacterium, a new genus of facultatively methylotrophic bacteria
    • Patt TE, Cole GC & Hanson RS (1976) Methylobacterium, a new genus of facultatively methylotrophic bacteria. Int J Syst Bacteriol26: 226-229.
    • (1976) Int J Syst Bacteriol , vol.26 , pp. 226-229
    • Patt, T.E.1    Cole, G.C.2    Hanson, R.S.3
  • 51
    • 78649677131 scopus 로고    scopus 로고
    • Genome sequence of the obligate methanotroph Methylosinus trichosporium OB3b
    • Stein LY, Yoon S, Semrau JDet al. (2010) Genome sequence of the obligate methanotroph Methylosinus trichosporium OB3b. J Bacteriol192: 6497-6498.
    • (2010) J Bacteriol , vol.192 , pp. 6497-6498
    • Stein, L.Y.1    Yoon, S.2    Semrau, J.D.3
  • 52
    • 79956066826 scopus 로고    scopus 로고
    • Genome sequence of the methanotrophic alphaproteobacterium Methylocystis sp. strain Rockwell (ATCC 49242)
    • Stein LY, Bringel F, Dispirito AAet al. (2011) Genome sequence of the methanotrophic alphaproteobacterium Methylocystis sp. strain Rockwell (ATCC 49242). J Bacteriol193: 2668-2669.
    • (2011) J Bacteriol , vol.193 , pp. 2668-2669
    • Stein, L.Y.1    Bringel, F.2    Dispirito, A.A.3
  • 54
    • 41349106563 scopus 로고    scopus 로고
    • Metabolic aspects of aerobic obligate methanotrophy
    • Trotsenko YA & Murrell JC (2008) Metabolic aspects of aerobic obligate methanotrophy. Adv Appl Microbiol63: 183-229.
    • (2008) Adv Appl Microbiol , vol.63 , pp. 183-229
    • Trotsenko, Y.A.1    Murrell, J.C.2
  • 55
    • 0027249216 scopus 로고
    • Further studies of the genus Methylobacterium and description of Methylobacteriumaminovorans sp. nov
    • Urakami T, Araki H, Suzuki K-I & Komagata K (1993) Further studies of the genus Methylobacterium and description of Methylobacteriumaminovorans sp. nov. Int J Syst Bacteriol43: 504-513.
    • (1993) Int J Syst Bacteriol , vol.43 , pp. 504-513
    • Urakami, T.1    Araki, H.2    Suzuki, K.-I.3    Komagata, K.4
  • 57
    • 0014793109 scopus 로고
    • Enrichment, isolation and some properties of methane-utilizing bacteria
    • Whittenbury R, Phillips KC & Wilkinson JF (1970) Enrichment, isolation and some properties of methane-utilizing bacteria. J Gen Microbiol61: 205-218.
    • (1970) J Gen Microbiol , vol.61 , pp. 205-218
    • Whittenbury, R.1    Phillips, K.C.2    Wilkinson, J.F.3
  • 60
    • 0021127989 scopus 로고
    • Variants of the obligate methanotroph isolate 761M capable of growth on glucose in the absence of methane
    • Zhao S-J & Hanson RS (1984a) Variants of the obligate methanotroph isolate 761M capable of growth on glucose in the absence of methane. Appl Environ Microb48: 807-812.
    • (1984) Appl Environ Microb , vol.48 , pp. 807-812
    • Zhao, S.-J.1    Hanson, R.S.2


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