Structural genomics of infectious disease drug targets: The SSGCID

Acta Crystallographica Section F: Structural Biology and Crystallization Communications

Volumn 67, Issue 9, 2011, Pages 979-984

  Stacy, Robin ^a,b   Begley, Darren W ^a,c   Phan, Isabelle ^a,b   Staker, Bart L ^a,c   Van Voorhis, Wesley C ^a,d   Varani, Gabriele ^a,e   Buchko, Garry W ^a,f   Stewart, Lance J ^a,c   Myler, Peter J ^a,b,e  

^a Seattle Structural Genomics Center for Infectious Disease   (United States)

^b SEATTLE BIOMEDICAL RESEARCH INSTITUTE   (United States)

^c Emerald BioStructures   (United States)

^d UNIVERSITY OF WASHINGTON SCHOOL OF MEDICINE   (United States)

^e UNIVERSITY OF WASHINGTON   (United States)

^f PACIFIC NORTHWEST NATIONAL LABORATORY   (United States)

Author keywords

emerging and re emerging diseases; infectious diseases; pathogens; SSGCID; structural genomics; structure based drug design

Indexed keywords

PROTEIN;

CHEMISTRY; GENETICS; GENOMICS; INFECTION; REVIEW;

GENOMICS; INFECTION; PROTEINS;

EID: 80052635173     PISSN: None     EISSN: 17443091     Source Type: Journal    
DOI: 10.1107/S1744309111029204     Document Type: Review

References (32)

1. Anderson, W. F. (2009). Infect. Disord. Drug Targets, 9, 507-517.
2. Begley, D. W., Davies, D. R., Hartley, R. C., Edwards, T. E., Staker, B. L., Van Voorhis, W. C., Myler, P. J. & Stewart, L. J. (2011). Methods Enzymol. 493, 533-556.
3. Begley, D. W., Hartley, R. C., Davies, D. R., Edwards, T. E., Leonard, J. T., Abendroth, J., Burris, C. A., Bhandari, J., Myler, P. J., Staker, B. L. & Stewart, L. J. (2011). J. Struct. Funct. Genomics, 12, 63-76.
4. Berman, H., Henrick, K. & Nakamura, H. (2003). Nature Struct. Biol. 10, 980.
5. Berman, H. M., Westbrook, J., Feng, Z., Gilliland, G., Bhat, T. N., Weissig, H., Shindyalov, I. N. & Bourne, P. E. (2000). Nucleic Acids Res. 28, 235-242.
6. Bochkarev, A. & Tempel, W. (2008). Methods Mol. Biol. 426, 515-521.
7. Bryan, C. M., Bhandari, J., Napuli, A. J., Leibly, D. J., Choi, R., Kelley, A., Van Voorhis, W. C., Edwards, T. E. & Stewart, L. J. (2011). Acta Cryst. F67,1010-1014.
8. Buchko, G. W., Kim, C.-Y., Terwilliger, T. C. & Myler, P. J. (2010). Tuberculosis, 90, 245-251.
9. Buchko, G. W., Phan, I., Myler, P. J., Terwilliger, T. C. & Kim, C.-Y. (2011). Arch. Biochem. Biophys. 506, 150-156.
10. Cadag, E., Tarczy-Hornoch, P. & Myler, P. J. (2008). AMIA Annu. Symp. Proc., p. 889.
11. Choi, R., Kelley, A., Leibly, D., Nakazawa Hewitt, S., Napuli, A. & Van Voorhis, W. (2011). Acta Cryst. F67, 998-1005.
12. Davies, D. R., Mamat, B., Magnusson, O. T., Christensen, J., Haraldsson, M. H., Mishra, R., Pease, B., Hansen, E., Singh, J., Zembower, D., Kim, H., Kiselyov, A. S., Burgin, A. B., Gurney, M. E. & Stewart, L. J. (2009). J. Med. Chem. 52, 4694-4715.
13. Edwards, T. E., Phan, I., Abendroth, J., Dieterich, S. H., Masoudi, A., Guo, W., Hewitt, S. N., Kelley, A., Leibly, D., Brittnacher, M. J., Staker, B. L., Miller, S. I., Van Voorhis, W. C., Myler, P. J. & Stewart, L. J. (2010). PLoS One, 5, e12803.
14. Eisenreich, W., Bacher, A., Arigoni, D. & Rohdich, F (2004). Cell. Mol. Life Sci. 61, 1401-1426.
15. Fan, E. et al. (2008). Methods Mol. Biol. 426, 497-513.
16. Gerdts, C. J., Elliott, M., Lovell, S., Mixon, M. B., Napuli, A. J., Staker, B. L., Nollert, P. & Stewart, L. (2008). Acta Cryst. D64, 1116-1122.
17. Gerdts, C. J., Stahl, G L., Napuli, A., Staker, B., Abendroth, J., Edwards, T. E., Myler, P., Van Voorhis, W., Nollert, P. & Stewart, L. J. (2010). J. Appl. Cryst. 43, 1078-1083.
18. Gileadi, O., Knapp, S., Lee, W. H., Marsden, B. D., Müller, S., Niesen, F H., Kavanagh, K. L., Ball, L. J., von Delft, F., Doyle, D. A., Oppermann, U. C. & Sundström, M. (2007). J. Struct. Funct. Genomics, 8, 107-119.
19. Goulding, C. W. et al. (2002). Curr. Drug Targets Infect. Disord. 2, 121-141.
20. Hunter, W. N. (2007). J. Biol. Chem. 282, 21573-21577.
21. Jaffe, E. K., Shanmugan, D., Gardberg, A., Dieterich, S., Sankaran, B., Stewart, L. J., Myler, P. J. & Roos, D. S. (2011). J. Biol. Chem. 286, 15298-15307.
22. Jomaa, H., Wiesner, J., Sanderbrand, S., Altincicek, B., Weidemeyer, C., Hintz, M., Türbachova, I., Eberl, M., Zeidler, J., Lichtenthaler, H. K., Soldati, D. & Beck, E. (1999). Science, 285, 1573-1576.
23. Lee, D., de Beer, T. A., Laskowski, R. A., Thornton, J. M. & Orengo, C. A. (2011). BMC Struct. Biol. 11, 2.
24. Li, L., Du, W. & Ismagilov, R. (2010a). J. Am. Chem. Soc. 132, 106-111.
25. Li, L., Du, W. & Ismagilov, R. (2010b). J. Am. Chem. Soc. 132, 112-119.
26. Moreno, H., Linford, A. S., Gilchrist, C. A. & Petri, W. A. (2010). Eukaryot. Cell, 9, 695-704.
27. Myler, P. J., Stacy, R., Stewart, L., Staker, B. L., Van Voorhis, W. C., Varani, G & Buchko, G W. (2009). Infect. Disord. Drug Targets 9, 493-506.
28. Rohmer, M., Knani, M., Simonin, P., Sutter, B. & Sahm, H. (1993). Biochem. J. 295, 517-524.
29. Terwilliger, T. C. et al. (2003). Tuberculosis, 83, 223-249.
30. Van Voorhis, W. C., Hol, W. G., Myler, P. J. & Stewart, L. J. (2009). PLoS Comput. Biol. 5, e1000530.
31. Yamada, S. et al. (2010). PLoS Pathog. 6, e1001034.
32. Zhang, Y., Buchko, G W., Qin, L., Robinson, H. & Varnum, S. M. (2011). Biochem. Biophys. Res. Commun. 404, 407-412.