-
1
-
-
77749274574
-
Targeted discovery of glycoside hydrolases from a switchgrass-adapted compost community
-
Allgaier, M., et al. 2010. Targeted discovery of glycoside hydrolases from a switchgrass-adapted compost community. PLoS One 5:e8812.
-
(2010)
PLoS One
, vol.5
-
-
Allgaier, M.1
-
2
-
-
33644863350
-
Rhodothermus marinus: physiology and molecular biology
-
Bjornsdottir, S. H., et al. 2006. Rhodothermus marinus: physiology and molecular biology. Extremophiles 10:1-16.
-
(2006)
Extremophiles
, vol.10
, pp. 1-16
-
-
Bjornsdottir, S.H.1
-
3
-
-
50249096176
-
Fungal secretomes: nature's toolbox for white biotechnology
-
Bouws, H., A. Wattenberg, and H. Zorn. 2008. Fungal secretomes: nature's toolbox for white biotechnology. Appl. Microbiol. Biotechnol. 80:381-388.
-
(2008)
Appl. Microbiol. Biotechnol.
, vol.80
, pp. 381-388
-
-
Bouws, H.1
Wattenberg, A.2
Zorn, H.3
-
4
-
-
33845274478
-
Enhancement of cellulosesaccharification kinetics using an ionic liquid pretreatment step
-
Dadi, A. P., S. Varanasi, and C. A. Schall. 2006. Enhancement of cellulosesaccharification kinetics using an ionic liquid pretreatment step. Biotechnol. Bioeng. 95:904-910.
-
(2006)
Biotechnol. Bioeng.
, vol.95
, pp. 904-910
-
-
Dadi, A.P.1
Varanasi, S.2
Schall, C.A.3
-
5
-
-
76349088995
-
Ionic liquid tolerant hyperthermophilic cellulases for biomass pretreatment and hydrolysis
-
Datta, S., et al. 2010. Ionic liquid tolerant hyperthermophilic cellulases for biomass pretreatment and hydrolysis. Green Chem. 12:338-345.
-
(2010)
Green Chem
, vol.12
, pp. 338-345
-
-
Datta, S.1
-
6
-
-
77952431173
-
Strategies for enhancing the effectiveness of metagenomic-based enzyme discovery in lignocellulolytic microbial communities
-
DeAngelis, K., et al. 2010. Strategies for enhancing the effectiveness of metagenomic-based enzyme discovery in lignocellulolytic microbial communities. Bioenergy Res. 3:146-158.
-
(2010)
Bioenergy Res
, vol.3
, pp. 146-158
-
-
DeAngelis, K.1
-
7
-
-
0001091599
-
Sphaerobacter thermophilus gen nov. sp. nov. A deeply rooting member of the Actinomycetes subdivision isolated from thermophilically treated sewage sludge
-
Demharter, W., R. Hensel, J. Smida, and E. Stackebrandt. 1989. Sphaerobacter thermophilus gen nov. sp. nov. A deeply rooting member of the Actinomycetes subdivision isolated from thermophilically treated sewage sludge. Syst. Appl. Microbiol. 11:261-266.
-
(1989)
Syst. Appl. Microbiol.
, vol.11
, pp. 261-266
-
-
Demharter, W.1
Hensel, R.2
Smida, J.3
Stackebrandt, E.4
-
8
-
-
13244255415
-
MUSCLE: a multiple sequence alignment method with reduced time and space complexity
-
Edgar, R. C. 2004. MUSCLE: a multiple sequence alignment method with reduced time and space complexity. BMC Bioinformatics 5:113.
-
(2004)
BMC Bioinformatics
, vol.5
, pp. 113
-
-
Edgar, R.C.1
-
9
-
-
77951498638
-
Experimental factors affecting PCR-based estimates of microbial species richness and evenness
-
Engelbrektson, A., et al. 2010. Experimental factors affecting PCR-based estimates of microbial species richness and evenness. ISME J. 4:642-647.
-
(2010)
ISME J
, vol.4
, pp. 642-647
-
-
Engelbrektson, A.1
-
10
-
-
33845996605
-
Can ionic liquids dissolve wood? Processing and analysis of lignocellulosic materials with 1-n-butyl-3-methylimidazolium chloride
-
Fort, D. A., et al. 2007. Can ionic liquids dissolve wood? Processing and analysis of lignocellulosic materials with 1-n-butyl-3-methylimidazolium chloride. Green Chem. 9:63-69.
-
(2007)
Green Chem
, vol.9
, pp. 63-69
-
-
Fort, D.A.1
-
11
-
-
73749087300
-
Mixture optimization of six core glycosyl hydrolases for maximizing saccharification of ammonia fiber expansion (AFEX) pretreated corn stover
-
Gao, D., S. P. Chundawat, C. Krishnan, V. Balan, and B. E. Dale. 2010. Mixture optimization of six core glycosyl hydrolases for maximizing saccharification of ammonia fiber expansion (AFEX) pretreated corn stover. Bioresour. Technol. 101:2770-2781.
-
(2010)
Bioresour. Technol.
, vol.101
, pp. 2770-2781
-
-
Gao, D.1
Chundawat, S.P.2
Krishnan, C.3
Balan, V.4
Dale, B.E.5
-
12
-
-
76649116511
-
Strategy for identification of novel fungal and bacterial glycosyl hydrolase hybrid mixtures that can efficiently saccharify pretreated lignocellulosic biomass
-
Gao, D. H., et al. 2010. Strategy for identification of novel fungal and bacterial glycosyl hydrolase hybrid mixtures that can efficiently saccharify pretreated lignocellulosic biomass. Bioenergy Res. 3:67-81.
-
(2010)
Bioenergy Res
, vol.3
, pp. 67-81
-
-
Gao, D.H.1
-
13
-
-
52949083172
-
Xylanase contribution to the efficiency of cellulose enzymatic hydrolysis of barley straw
-
Garcia-Aparicio, M. P., et al. 2007. Xylanase contribution to the efficiency of cellulose enzymatic hydrolysis of barley straw. Appl. Biochem. Biotechnol. 137:353-365.
-
(2007)
Appl. Biochem. Biotechnol.
, vol.137
, pp. 353-365
-
-
Garcia-Aparicio, M.P.1
-
14
-
-
2342586677
-
The genome sequence of the extreme thermophile Thermus thermophilus
-
Henne, A., et al. 2004. The genome sequence of the extreme thermophile Thermus thermophilus. Nat. Biotechnol. 22:547-553.
-
(2004)
Nat. Biotechnol.
, vol.22
, pp. 547-553
-
-
Henne, A.1
-
15
-
-
9744250905
-
Reclassification of Sphaerobacter thermophilus from the subclass Sphaerobacteridae in the phylum Actinobacteria to the class Thermomicrobia (emended description) in the phylum Chloroflexi (emended description)
-
Hugenholtz, P., and E. Stackebrandt. 2004. Reclassification of Sphaerobacter thermophilus from the subclass Sphaerobacteridae in the phylum Actinobacteria to the class Thermomicrobia (emended description) in the phylum Chloroflexi (emended description). Int. J. Syst. Evol. Microbiol. 54:2049-2051.
-
(2004)
Int. J. Syst. Evol. Microbiol.
, vol.54
, pp. 2049-2051
-
-
Hugenholtz, P.1
Stackebrandt, E.2
-
16
-
-
0015796065
-
Thermomicrobium, a new genus of extremely thermophilic bacteria
-
Jackson, T. J., R. F. Ramaley, and W. G. Meinsche. 1973. Thermomicrobium, a new genus of extremely thermophilic bacteria. Int. J. Syst. Bacteriol. 23: 28-36.
-
(1973)
Int. J. Syst. Bacteriol.
, vol.23
, pp. 28-36
-
-
Jackson, T.J.1
Ramaley, R.F.2
Meinsche, W.G.3
-
17
-
-
60549104203
-
An optimized microplate assay system for quantitative evaluation of plant cell wall-degrading enzyme activity of fungal culture extracts
-
King, B. C., M. K. Donnelly, G. C. Bergstrom, L. P. Walker, and D. M. Gibson. 2009. An optimized microplate assay system for quantitative evaluation of plant cell wall-degrading enzyme activity of fungal culture extracts. Biotechnol. Bioeng. 102:1033-1044.
-
(2009)
Biotechnol. Bioeng.
, vol.102
, pp. 1033-1044
-
-
King, B.C.1
Donnelly, M.K.2
Bergstrom, G.C.3
Walker, L.P.4
Gibson, D.M.5
-
18
-
-
73149093613
-
Xylanase production by Paenibacillus campinasensis BL11 and its pretreatment of hardwood kraft pulp bleaching
-
Ko, C. H., et al. 2010. Xylanase production by Paenibacillus campinasensis BL11 and its pretreatment of hardwood kraft pulp bleaching. Int. Biodeter. Biodegradation 64:13-19.
-
(2010)
Int. Biodeter. Biodegradation.
, vol.64
, pp. 13-19
-
-
Ko, C.H.1
-
19
-
-
73349110099
-
Wrinkles in the rare biosphere: pyrosequencing errors can lead to artificial inflation of diversity estimates
-
Kunin, V., A. Engelbrektson, H. Ochman, and P. Hugenholtz. 2010. Wrinkles in the rare biosphere: pyrosequencing errors can lead to artificial inflation of diversity estimates. Environ. Microbiol. 12:118-123.
-
(2010)
Environ. Microbiol.
, vol.12
, pp. 118-123
-
-
Kunin, V.1
Engelbrektson, A.2
Ochman, H.3
Hugenholtz, P.4
-
20
-
-
79961076345
-
The phylogenetic placement of the nonphototrophic gram-positive thermophile Thermobaculum terrenum and branching orders within the phylum Chloroflexi inferred from gene order comparisons
-
10 September doi:10.1099/ijs.0.026088-0
-
Kunisawa, T. 10 September 2010. The phylogenetic placement of the nonphototrophic gram-positive thermophile Thermobaculum terrenum and branching orders within the phylum Chloroflexi inferred from gene order comparisons. Int. J. Syst. Evol. Microbiol. doi:10.1099/ijs.0.026088-0.
-
(2010)
Int. J. Syst. Evol. Microbiol
-
-
Kunisawa, T.1
-
21
-
-
77949873592
-
Comparison of dilute acid and ionic liquid pretreatment of switchgrass: biomass recalcitrance, delignification and enzymatic saccharification
-
Li, C. L., et al. 2010. Comparison of dilute acid and ionic liquid pretreatment of switchgrass: biomass recalcitrance, delignification and enzymatic saccharification. Bioresour. Technol. 101:4900-4906.
-
(2010)
Bioresour. Technol.
, vol.101
, pp. 4900-4906
-
-
Li, C.L.1
-
22
-
-
77952998412
-
Toward plant cell wall degradation under thermophilic condition: a unique microbial community developed originally from swine waste
-
Liang, Y., J. Yesuf, and Z. Feng. 2010. Toward plant cell wall degradation under thermophilic condition: a unique microbial community developed originally from swine waste. Appl. Biochem. Biotechnol. 161:147-156.
-
(2010)
Appl. Biochem. Biotechnol.
, vol.161
, pp. 147-156
-
-
Liang, Y.1
Yesuf, J.2
Feng, Z.3
-
23
-
-
0036714783
-
Microbial cellulose utilization: fundamentals and biotechnology
-
Lynd, L. R., P. J. Weimer, W. H. van Zyl, and I. S. Pretorius. 2002. Microbial cellulose utilization: fundamentals and biotechnology. Microbiol. Mol. Biol. Rev. 66:506-577.
-
(2002)
Microbiol. Mol. Biol. Rev.
, vol.66
, pp. 506-577
-
-
Lynd, L.R.1
Weimer, P.J.2
van Zyl, W.H.3
Pretorius, I.S.4
-
24
-
-
70749129072
-
The minimal enzyme cocktail concept for biomass processing
-
Meyer, A. S., L. Rosgaard, and H. R. Sorensen. 2009. The minimal enzyme cocktail concept for biomass processing. J. Cereal Sci. 50:337-344.
-
(2009)
J. Cereal Sci.
, vol.50
, pp. 337-344
-
-
Meyer, A.S.1
Rosgaard, L.2
Sorensen, H.R.3
-
25
-
-
79956041561
-
EMIRGE: reconstruction of full length ribosomal genes from microbial community short read sequencing data
-
Miller, C. S., B. J. Baker, B. C. Thomas, S. W. Singer, and J. F. Banfield. 2011. EMIRGE: reconstruction of full length ribosomal genes from microbial community short read sequencing data. Genome Biol. 12:R44.
-
(2011)
Genome Biol
, vol.12
-
-
Miller, C.S.1
Baker, B.J.2
Thomas, B.C.3
Singer, S.W.4
Banfield, J.F.5
-
26
-
-
77955174103
-
Characterization of thermostable cellulases produced by Bacillus and Geobacillus strains
-
Rastogi, G., et al. 2010. Characterization of thermostable cellulases produced by Bacillus and Geobacillus strains. Bioresour. Technol. 101:8798-8806.
-
(2010)
Bioresour. Technol.
, vol.101
, pp. 8798-8806
-
-
Rastogi, G.1
-
27
-
-
33644930839
-
Mechanism of cellulose dissolution in the ionic liquid 1-n-butyl-3-methylimidazolium chloride: a C-13 and Cl-35/37 NMR relaxation study on model systems
-
Remsing, R. C., R. P. Swatloski, R. D. Rogers, and G. Moyna. 2006. Mechanism of cellulose dissolution in the ionic liquid 1-n-butyl-3-methylimidazolium chloride: a C-13 and Cl-35/37 NMR relaxation study on model systems. Chem. Commun. 12:1271-1273.
-
(2006)
Chem. Commun.
, vol.12
, pp. 1271-1273
-
-
Remsing, R.C.1
Swatloski, R.P.2
Rogers, R.D.3
Moyna, G.4
-
28
-
-
74549221383
-
Annotation error in public databases: misannotation of molecular function in enzyme superfamilies
-
Schnoes, A. M., S. D. Brown, I. Dodevski, and P. C. Babbitt. 2009. Annotation error in public databases: misannotation of molecular function in enzyme superfamilies. PLoS Comput. Biol. 5:e1000605.
-
(2009)
PLoS Comput. Biol.
, vol.5
-
-
Schnoes, A.M.1
Brown, S.D.2
Dodevski, I.3
Babbitt, P.C.4
-
29
-
-
0037921257
-
Comparison of HPLC and colorimetric methods for measuring celluloytic activity
-
Schwald, W., M. Chan, C. Breuil, and J. N. Saddler. 1988. Comparison of HPLC and colorimetric methods for measuring celluloytic activity. Appl. Microbiol. Biotechnol. 28:398-403.
-
(1988)
Appl. Microbiol. Biotechnol.
, vol.28
, pp. 398-403
-
-
Schwald, W.1
Chan, M.2
Breuil, C.3
Saddler, J.N.4
-
30
-
-
33750403801
-
RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
-
Stamatakis, A. 2006. RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22:2688-2690.
-
(2006)
Bioinformatics
, vol.22
, pp. 2688-2690
-
-
Stamatakis, A.1
-
31
-
-
0033950266
-
Thermobacillus xylanilyticus gen. nov., sp. nov., a new aerobic thermophilic xylan-degrading bacterium isolated from farm soil
-
Touzel, J. P., M. O'Donohue, P. Debeire, E. Samain, and C. Breton. 2000. Thermobacillus xylanilyticus gen. nov., sp. nov., a new aerobic thermophilic xylan-degrading bacterium isolated from farm soil. Int. J. Syst. Evol. Microbiol. 50:315-320.
-
(2000)
Int. J. Syst. Evol. Microbiol.
, vol.50
, pp. 315-320
-
-
Touzel, J.P.1
O'Donohue, M.2
Debeire, P.3
Samain, E.4
Breton, C.5
-
32
-
-
0041880027
-
Ionic liquid salt-induced inactivation and unfolding of cellulase from Trichoderma reesei
-
Turner, M. B., S. K. Spear, J. G. Huddleston, J. D. Holbrey, and R. D. Rogers. 2003. Ionic liquid salt-induced inactivation and unfolding of cellulase from Trichoderma reesei. Green Chem. 5:443-447.
-
(2003)
Green Chem
, vol.5
, pp. 443-447
-
-
Turner, M.B.1
Spear, S.K.2
Huddleston, J.G.3
Holbrey, J.D.4
Rogers, R.D.5
-
33
-
-
60749119754
-
Systems biology: functional analysis of natural microbial consortia using community proteomics
-
VerBerkmoes, N. C., V. J. Denef, R. L. Hettich, and J. F. Banfield. 2009. Systems biology: functional analysis of natural microbial consortia using community proteomics. Nat. Rev. Microbiol. 7:196-205.
-
(2009)
Nat. Rev. Microbiol.
, vol.7
, pp. 196-205
-
-
VerBerkmoes, N.C.1
Denef, V.J.2
Hettich, R.L.3
Banfield, J.F.4
-
34
-
-
70449133909
-
Isolation and characterization of novel cellulase genes from uncultured microorganisms in different environmental niches
-
Wang, F., F. Li, G. Chen, and W. Liu. 2009. Isolation and characterization of novel cellulase genes from uncultured microorganisms in different environmental niches. Microbiol. Res. 164:650-657.
-
(2009)
Microbiol. Res.
, vol.164
, pp. 650-657
-
-
Wang, F.1
Li, F.2
Chen, G.3
Liu, W.4
-
35
-
-
34547421702
-
Thermobacillus composti sp. nov., a moderately thermophilic bacterium isolated from a composting reactor
-
Watanabe, K., N. Nagao, S. Yamamoto, T. Toda, and N. Kurosawa. 2007. Thermobacillus composti sp. nov., a moderately thermophilic bacterium isolated from a composting reactor. Int. J. Syst. Evol. Microbiol. 57:1473-1477.
-
(2007)
Int. J. Syst. Evol. Microbiol.
, vol.57
, pp. 1473-1477
-
-
Watanabe, K.1
Nagao, N.2
Yamamoto, S.3
Toda, T.4
Kurosawa, N.5
-
36
-
-
62649155346
-
Complete genome sequence of the aerobic COoxidizing thermophile Thermomicrobium roseum
-
Wu, D. Y., et al. 2009. Complete genome sequence of the aerobic COoxidizing thermophile Thermomicrobium roseum. PLoS One 4:e4207.
-
(2009)
PLoS One
, vol.4
-
-
Wu, D.Y.1
-
37
-
-
0042812120
-
Gemmatimonas aurantiaca gen. nov., sp nov., a gram-negative, aerobic, polyphosphate-accumulating organism, the first cultured representative of the new bacterial phylum Gemmatimonadetes phyl. nov
-
Zhang, H., et al. 2003. Gemmatimonas aurantiaca gen. nov., sp nov., a gram-negative, aerobic, polyphosphate-accumulating organism, the first cultured representative of the new bacterial phylum Gemmatimonadetes phyl. nov. Int. J. Syst. Evol. Microbiol. 53:1155-1163.
-
(2003)
Int. J. Syst. Evol. Microbiol.
, vol.53
, pp. 1155-1163
-
-
Zhang, H.1
|