-
1
-
-
79953163378
-
Chromatin higher-order structures and gene regulation
-
Li G, Reinberg D. Chromatin higher-order structures and gene regulation. Curr Opin Genet Dev 2011; 21:175-86.
-
(2011)
Curr Opin Genet Dev
, vol.21
, pp. 175-186
-
-
Li, G.1
Reinberg, D.2
-
2
-
-
77649235074
-
Programming DNA replication origins and chromosome organization
-
Cayrou C, Coulombe P, Mechali M. Programming DNA replication origins and chromosome organization. Chromosome Res 2010; 18:137-45.
-
(2010)
Chromosome Res
, vol.18
, pp. 137-145
-
-
Cayrou, C.1
Coulombe, P.2
Mechali, M.3
-
3
-
-
66349130703
-
Chromatin dynamics coupled to DNA repair
-
Huertas D, Sendra R, Munoz P. Chromatin dynamics coupled to DNA repair. Epigenetics 2009; 4:31-42.
-
(2009)
Epigenetics
, vol.4
, pp. 31-42
-
-
Huertas, D.1
Sendra, R.2
Munoz, P.3
-
4
-
-
23844548542
-
The relationship between chromatin structure and transcriptional activity in mammalian genomes
-
Gilbert N, Ramsahoye B. The relationship between chromatin structure and transcriptional activity in mammalian genomes. Brief Funct Genomic Proteomic 2005; 4:129-42.
-
(2005)
Brief Funct Genomic Proteomic
, vol.4
, pp. 129-142
-
-
Gilbert, N.1
Ramsahoye, B.2
-
6
-
-
67650711140
-
Genome-wide views of chromatin structure
-
Rando OJ, Chang HY. Genome-wide views of chromatin structure. Annu Rev Biochem 2009; 78:245-71.
-
(2009)
Annu Rev Biochem
, vol.78
, pp. 245-271
-
-
Rando, O.J.1
Chang, H.Y.2
-
7
-
-
78149379276
-
Chemical tools in chromatin research
-
Schwarzer D. Chemical tools in chromatin research. J Pept Sci 2010; 16:530-7.
-
(2010)
J Pept Sci
, vol.16
, pp. 530-537
-
-
Schwarzer, D.1
-
8
-
-
0033118935
-
In vivo methods to analyze chromatin structure
-
Simpson RT In vivo methods to analyze chromatin structure. Curr Opin Genet Dev 1999; 9:225-9.
-
(1999)
Curr Opin Genet Dev
, vol.9
, pp. 225-229
-
-
Simpson, R.T.1
-
9
-
-
0018472886
-
Reaction of nucleosome DNA with dimethyl sulfate
-
McGhee JD, Felsenfeld G. Reaction of nucleosome DNA with dimethyl sulfate. Proc Natl Acad Sci USA 1979; 76:2133-7.
-
(1979)
Proc Natl Acad Sci USA
, vol.76
, pp. 2133-2137
-
-
McGhee, J.D.1
Felsenfeld, G.2
-
10
-
-
0031080738
-
Footprinting with UV irradiation and LMPCR
-
Pfeifer GP, Tornaletti S. Footprinting with UV irradiation and LMPCR. Methods 1997; 11:189-96.
-
(1997)
Methods
, vol.11
, pp. 189-196
-
-
Pfeifer, G.P.1
Tornaletti, S.2
-
11
-
-
0032520683
-
In vivo mapping of nucleo-somes using psoralen-DNA crosslinking and primer extension
-
Wellinger RE, Sogo JM. In vivo mapping of nucleo-somes using psoralen-DNA crosslinking and primer extension. Nucleic Acids Res 1998; 26:1544-5.
-
(1998)
Nucleic Acids Res
, vol.26
, pp. 1544-1545
-
-
Wellinger, R.E.1
Sogo, J.M.2
-
12
-
-
0035340816
-
Chromatin structure mapping in Saccharomyces cerevisiae in vivo with DNase I
-
Wang X, Simpson RT. Chromatin structure mapping in Saccharomyces cerevisiae in vivo with DNase I. Nucleic Acids Res 2001; 29:1943-50.
-
(2001)
Nucleic Acids Res
, vol.29
, pp. 1943-1950
-
-
Wang, X.1
Simpson, R.T.2
-
13
-
-
0026591791
-
Active genes in budding yeast display enhanced in vivo accessibility to foreign DNA methylases: A novel in vivo probe for chromatin structure of yeast
-
Singh J, Klar AJ. Active genes in budding yeast display enhanced in vivo accessibility to foreign DNA methylases: a novel in vivo probe for chromatin structure of yeast. Genes Dev 1992; 6:186-96.
-
(1992)
Genes Dev
, vol.6
, pp. 186-196
-
-
Singh, J.1
Klar, A.J.2
-
14
-
-
13644256813
-
The use of prokaryotic DNA methyltransferases as experimental and analytical tools in modern biology
-
Buryanov Y, Shevchuk T. The use of prokaryotic DNA methyltransferases as experimental and analytical tools in modern biology. Anal Biochem 2005; 338:1-11.
-
(2005)
Anal Biochem
, vol.338
, pp. 1-11
-
-
Buryanov, Y.1
Shevchuk, T.2
-
15
-
-
0034825278
-
Negative regulation of transcription by the yeast global transcription factors, Gal11 and Sin4
-
Nishizawa M. Negative regulation of transcription by the yeast global transcription factors, Gal11 and Sin4. Yeast 2001; 18:1099-110.
-
(2001)
Yeast
, vol.18
, pp. 1099-1110
-
-
Nishizawa, M.1
-
16
-
-
69449084972
-
Histone H3 N-terminus regulates higher order structure of yeast heterochromatin
-
Sperling AS, Grunstein M. Histone H3 N-terminus regulates higher order structure of yeast heterochromatin. Proc Natl Acad Sci USA 2009; 106:13153-9.
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 13153-13159
-
-
Sperling, A.S.1
Grunstein, M.2
-
17
-
-
78651484494
-
Spt10 and Spt21 are required for transcriptional silencing in Saccharomyces cerevisiae
-
Chang JS, Winston F. Spt10 and Spt21 are required for transcriptional silencing in Saccharomyces cerevisiae. Eukaryot Cell 2011; 10:118-29.
-
(2011)
Eukaryot Cell
, vol.10
, pp. 118-129
-
-
Chang, J.S.1
Winston, F.2
-
18
-
-
0030043038
-
Introduction of a DNA methyltransferase into Drosophila to probe chromatin structure in vivo
-
Wines DR, Talbert PB, Clark DV, Henikoff S. Introduction of a DNA methyltransferase into Drosophila to probe chromatin structure in vivo. Chromosoma 1996; 104:332-40.
-
(1996)
Chromosoma
, vol.104
, pp. 332-340
-
-
Wines, D.R.1
Talbert, P.B.2
Clark, D.V.3
Henikoff, S.4
-
19
-
-
0031731777
-
In vivo chromatin accessibility correlates with gene silencing in Drosophila
-
Boivin A, Dura JM. In vivo chromatin accessibility correlates with gene silencing in Drosophila. Genetics 1998; 150:1539-49.
-
(1998)
Genetics
, vol.150
, pp. 1539-1549
-
-
Boivin, A.1
Dura, J.M.2
-
20
-
-
34147099099
-
Identification and mapping of open chromatin regions within a 140 kb polygenic locus of human chromosome 19 using E. coli Dam methylase
-
Bulanenkova S, Snezhkov E, Nikolaev L, Sverdlov E. Identification and mapping of open chromatin regions within a 140 kb polygenic locus of human chromosome 19 using E. coli Dam methylase. Genetica 2007; 130:83-92.
-
(2007)
Genetica
, vol.130
, pp. 83-92
-
-
Bulanenkova, S.1
Snezhkov, E.2
Nikolaev, L.3
Sverdlov, E.4
-
21
-
-
15844428981
-
Suppression subtractive hybridization: A method for generating differentially regulated or tissue-specific cDNA probes and libraries
-
Diatchenko L, Lau YF, Campbell AP, Chenchik A, Moqadam F, Huang B, et al. Suppression subtractive hybridization: a method for generating differentially regulated or tissue-specific cDNA probes and libraries. Proc Natl Acad Sci USA 1996; 93:6025-30.
-
(1996)
Proc Natl Acad Sci USA
, vol.93
, pp. 6025-6030
-
-
Diatchenko, L.1
Lau, Y.F.2
Campbell, A.P.3
Chenchik, A.4
Moqadam, F.5
Huang, B.6
-
22
-
-
1542344844
-
Non-methylated Genomic Sites Coincidence Cloning (NGSCC): An approach to large scale analysis of hypomethylated CpG patterns at predetermined genomic loci
-
Azhikina T, Gainetdinov I, Skvortsova Y, Batrak A, Dmitrieva N, Sverdlov E. Non-methylated Genomic Sites Coincidence Cloning (NGSCC): an approach to large scale analysis of hypomethylated CpG patterns at predetermined genomic loci. Mol Genet Genomics 2004; 271:22-32.
-
(2004)
Mol Genet Genomics
, vol.271
, pp. 22-32
-
-
Azhikina, T.1
Gainetdinov, I.2
Skvortsova, Y.3
Batrak, A.4
Dmitrieva, N.5
Sverdlov, E.6
-
23
-
-
0028326787
-
Core histone hyperacetylation co-maps with generalized DNase I sensitivity in the chicken beta-globin chromosomal domain
-
Hebbes TR, Clayton AL, Thorne AW, Crane-Robinson C. Core histone hyperacetylation co-maps with generalized DNase I sensitivity in the chicken beta-globin chromosomal domain. EMBO J 1994; 13:1823-30.
-
(1994)
EMBO J
, vol.13
, pp. 1823-1830
-
-
Hebbes, T.R.1
Clayton, A.L.2
Thorne, A.W.3
Crane-Robinson, C.4
-
24
-
-
11244349707
-
The hTERT gene is embedded in a nuclease-resistant chromatin domain
-
Wang S, Zhu J. The hTERT gene is embedded in a nuclease-resistant chromatin domain. J Biol Chem 2004; 279:55401-10.
-
(2004)
J Biol Chem
, vol.279
, pp. 55401-55410
-
-
Wang, S.1
Zhu, J.2
-
25
-
-
0242439142
-
Nuclear localization and histone acetylation: A pathway for chromatin opening and transcriptional activation of the human beta-globin locus
-
Schubeler D, Francastel C, Cimbora DM, Reik A, Martin DI, Groudine M. Nuclear localization and histone acetylation: a pathway for chromatin opening and transcriptional activation of the human beta-globin locus. Genes Dev 2000; 14:940-50.
-
(2000)
Genes Dev
, vol.14
, pp. 940-950
-
-
Schubeler, D.1
Francastel, C.2
Cimbora, D.M.3
Reik, A.4
Martin, D.I.5
Groudine, M.6
-
26
-
-
14644406272
-
Active chromatin domains are defined by acetylation islands revealed by genome-wide mapping
-
Roh TY, Cuddapah S, Zhao K. Active chromatin domains are defined by acetylation islands revealed by genome-wide mapping. Genes Dev 2005; 19:542-52.
-
(2005)
Genes Dev
, vol.19
, pp. 542-552
-
-
Roh, T.Y.1
Cuddapah, S.2
Zhao, K.3
-
27
-
-
33645316059
-
Tissue specificity of methylation of cytosines in regulatory regions of four genes located in the locus FXYD5-COX7A1 of human chromosome 19: Correlation with their expression level
-
Chalaya TV, Akopov SB, Nikolaev LG, Sverdlov ED. Tissue specificity of methylation of cytosines in regulatory regions of four genes located in the locus FXYD5-COX7A1 of human chromosome 19: correlation with their expression level. Biochemistry (Moscow) 2006; 71:294-9.
-
(2006)
Biochemistry (Moscow)
, vol.71
, pp. 294-299
-
-
Chalaya, T.V.1
Akopov, S.B.2
Nikolaev, L.G.3
Sverdlov, E.D.4
-
28
-
-
0030782227
-
Role of architectural elements in combinatorial regulation of initiation of DNA replication in Escherichia coli
-
Polaczek P, Kwan K, Liberies DA, Campbell JL. Role of architectural elements in combinatorial regulation of initiation of DNA replication in Escherichia coli. Mol Microbiol 1997; 26:261-75.
-
(1997)
Mol Microbiol
, vol.26
, pp. 261-275
-
-
Polaczek, P.1
Kwan, K.2
Liberies, D.A.3
Campbell, J.L.4
-
29
-
-
33847076849
-
Chromatin modifications and their function
-
Kouzarides T Chromatin modifications and their function. Cell 2007; 128:693-705.
-
(2007)
Cell
, vol.128
, pp. 693-705
-
-
Kouzarides, T.1
-
30
-
-
77955423898
-
Corecognition of DNA and a methylated histone tail by the MSL3 chromodomain
-
Kim D, Blus BJ, Chandra V, Huang P, Rastinejad F, Khorasanizadeh S. Corecognition of DNA and a methylated histone tail by the MSL3 chromodomain. Nat Struct Mol Biol 2010; 17:1027-9.
-
(2010)
Nat Struct Mol Biol
, vol.17
, pp. 1027-1029
-
-
Kim, D.1
Blus, B.J.2
Chandra, V.3
Huang, P.4
Rastinejad, F.5
Khorasanizadeh, S.6
-
32
-
-
33746042141
-
Methylation-free site patterns along a 1-Mb locus on Chr19 in cancerous and normal cells are similar. A new fast approach for analyzing unmethylated CCGG sites distribution
-
Azhikina T, Gainetdinov I, Skvortsova Y, Sverdlov E. Methylation-free site patterns along a 1-Mb locus on Chr19 in cancerous and normal cells are similar. A new fast approach for analyzing unmethylated CCGG sites distribution. Mol Genet Genomics 2006; 275:615-22.
-
(2006)
Mol Genet Genomics
, vol.275
, pp. 615-622
-
-
Azhikina, T.1
Gainetdinov, I.2
Skvortsova, Y.3
Sverdlov, E.4
-
33
-
-
0034161329
-
Mapping chromosomal proteins in vivo by formaldehyde-crosslinked-chromatin immunoprecipitation
-
Orlando V. Mapping chromosomal proteins in vivo by formaldehyde-crosslinked-chromatin immunoprecipitation. Trends Biochem Sci 2000; 25:99-104.
-
(2000)
Trends Biochem Sci
, vol.25
, pp. 99-104
-
-
Orlando, V.1
-
34
-
-
33846078622
-
The UCSC genome browser database: Update 2007
-
Kuhn RM, Karolchik D, Zweig AS, Trumbower H, Thomas DJ, Thakkapallayil A, et al. The UCSC genome browser database: update 2007. Nucleic Acids Res 2007; 35:668-73.
-
(2007)
Nucleic Acids Res
, vol.35
, pp. 668-673
-
-
Kuhn, R.M.1
Karolchik, D.2
Zweig, A.S.3
Trumbower, H.4
Thomas, D.J.5
Thakkapallayil, A.6
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