Crystal structure of Fushi tarazu factor 1 ligand binding domain/Fushi tarazu peptide complex identifies new class of nuclear receptors

Journal of Biological Chemistry

Volumn 286, Issue 36, 2011, Pages 31225-31231

  Yoo, Jiho ^a   Ko, Sunggeon ^a   Kim, Hyeyon ^a   Sampson, Heidi ^b   Yun, Ji Hye ^a   Choe, Kwang Min ^a   Chang, Iksoo ^c   Arrowsmith, Cheryl H ^d   Krause, Henry M ^d   Cho, Hyun Soo ^a   Lee, Weontae ^a  

^a Yonsei University   (South Korea)

^b MCGILL UNIVERSITY   (Canada)

^c Pusan National University   (South Korea)

^d UNIVERSITY OF TORONTO   (Canada)

Author keywords

[No Author keywords available]

Indexed keywords

ACTIVITY ASSAYS; COFACTORS; DROSOPHILA EMBRYOS; LIGAND BINDING; LIGAND BINDING DOMAIN; NUCLEAR RECEPTORS; PEPTIDE COMPLEX; PUTATIVE LIGANDS; TRANSCRIPTIONAL ACTIVITY;

CRYSTAL STRUCTURE; GENES; PEPTIDES; TRANSCRIPTION FACTORS; X RAY CRYSTALLOGRAPHY;

LIGANDS;

FUSHI TARAZU PROTEIN; HYBRID PROTEIN; LIVER RECEPTOR HOMOLOG 1; ORPHAN NUCLEAR RECEPTOR; POLYHISTIDINE TAG; STEROIDOGENIC FACTOR 1;

ANIMAL CELL; ARTICLE; COMPLEX FORMATION; CONTROLLED STUDY; CRYSTAL STRUCTURE; DROSOPHILA MELANOGASTER; HELIX 6; HYDROPHOBICITY; LIGAND BINDING; MUTAGENESIS; NONHUMAN; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN DOMAIN; PROTEIN PROTEIN INTERACTION; PROTEIN STRUCTURE; RESIDUE ANALYSIS; X RAY CRYSTALLOGRAPHY;

ANIMALS; BINDING SITES; CRYSTALLOGRAPHY, X-RAY; DNA-BINDING PROTEINS; DROSOPHILA MELANOGASTER; DROSOPHILA PROTEINS; LIGANDS; PEPTIDES; PROTEIN BINDING; PROTEIN CONFORMATION; PROTEIN STRUCTURE, QUATERNARY; PROTEIN STRUCTURE, TERTIARY; RECEPTORS, CYTOPLASMIC AND NUCLEAR; SEQUENCE HOMOLOGY, AMINO ACID; TRANSCRIPTION FACTORS; TRANSCRIPTION, GENETIC;

EID: 80052423668     PISSN: 00219258     EISSN: 1083351X     Source Type: Journal    
DOI: 10.1074/jbc.M111.252916     Document Type: Article

References (43)

1. Lavorgna, G., Karim, F. D., Thummel, C. S., and Wu, C. (1993) Proc. Natl. Acad. Sci. U.S.A. 90, 3004-3008
2. Ohno, C. K., and Petkovich, M. (1993) Mechanisms of development 40, 13-24
3. Woodard, C. T., Baehrecke, E. H., and Thummel, C. S. (1994) Cell 79, 607-615
4. Struhl, G. (1985) Nature 318, 677-680
5. Ueda, H., Sonoda, S., Brown, J. L., Scott, M. P., and Wu, C. (1990) Genes Dev. 4, 624-635
6. Carroll, S. B., and Scott, M. P. (1985) Cell 43, 47-57
7. Wakimoto, B. T., Turner, F. R., and Kaufman, T. C. (1984) Dev. Biol. 102, 147-172
8. Beato, M. (1985) Haematol. Blood Transfus. 29, 217-223
9. Blumberg, B., and Evans, R. M. (1998) Genes Dev. 12, 3149-3155
10. Giguère, V. (1999) Endocr. Rev. 20, 689-725
11. Kastner, P., Mark, M., and Chambon, P. (1995) Cell 83, 859-869
12. Mangelsdorf, D. J., and Evans, R. M. (1995) Cell 83, 841-850
13. Mangelsdorf, D. J., Thummel, C., Beato, M., Herrlich, P., Schütz, G., Umesono, K., Blumberg, B., Kastner, P., Mark, M., Chambon, P., and Evans, R. M. (1995) Cell 83, 835-839
14. Thummel, C. S. (1995) Cell 83, 871-877
15. Bourguet, W., Ruff, M., Chambon, P., Gronemeyer, H., and Moras, D. (1995) Nature 375, 377-382
16. Renaud, J. P., Rochel, N., Ruff, M., Vivat, V., Chambon, P., Gronemeyer, H., and Moras, D. (1995) Nature 378, 681-689
17. Brzozowski, A. M., Pike, A. C., Dauter, Z., Hubbard, R. E., Bonn, T., Engström, O., Ohman, L., Greene, G. L., Gustafsson, J. A., and Carlquist, M. (1997) Nature 389, 753-758
18. Shiau, A. K., Barstad, D., Loria, P. M., Cheng, L., Kushner, P. J., Agard, D. A., and Greene, G. L. (1998) Cell 95, 927-937
19. Sablin, E. P., Krylova, I. N., Fletterick, R. J., and Ingraham, H. A. (2003) Mol. Cell 11, 1575-1585
20. Krylova, I. N., Sablin, E. P., Moore, J., Xu, R. X., Waitt, G. M., MacKay, J. A., Juzumiene, D., Bynum, J. M., Madauss, K., Montana, V., Lebedeva, L., Suzawa, M., Williams, J. D., Williams, S. P., Guy, R. K., Thornton, J. W., Fletterick, R. J., Willson, T. M., and Ingraham, H. A. (2005) Cell 120, 343-355
21. Desplan, C., Theis, J., and O'Farrell, P. H. (1988) Cell 54, 1081-1090
22. Schwartz, C. J., Sampson, H. M., Hlousek, D., Percival-Smith, A., Copeland, J. W., Simmonds, A. J., and Krause, H. M. (2001) EMBO J. 20, 510-519
23. Feng, W., Ribeiro, R. C., Wagner, R. L., Nguyen, H., Apriletti, J. W., Fletterick, R. J., Baxter, J. D., Kushner, P. J., and West, B. L. (1998) Science 280, 1747-1749
24. Mak, H. Y., Hoare, S., Henttu, P. M., and Parker, M. G. (1999) Mol. Cell. Biol. 19, 3895-3903
25. Otwinowski, Z., and Minor, O.(1997) Methods in Enzymology 276, 307-326
26. Terwilliger, T. C., and Berendzen, J. (1999) Acta Crystallogr. 55, 849-861
27. Terwilliger, T. C. (2000) Acta Crystallogr. 56, 965-972
28. Murshudov, G. N., Vagin, A. A., and Dodson, E. J. (1997) Acta Crystallogr. 53, 240-255
29. Murshudov, G. N., Vagin, A. A., Lebedev, A., Wilson, K. S., and Dodson, E. J. (1999) Acta Crystallogr. 55, 247-255
30. Brunger, A. T., Adams, P. D., Clore, G. M., DeLano, W. L., Gros, P., Grosse-Kunstleve, R. W., Jiang, J. S., Kuszewski, J., Nilges, M., Pannu, N. S., Read, R. J., Rice, L. M., Simonson, T., and Warren, G. L. (1998) Acta Crystallogr. 54, 905-921
31. Jones, T. A., Zou, J. Y., Cowan, S. W., and Kjeldgaard, M. (1991) Acta Crystallogr. A. 47, 110-119
32. Laskowski, R. A., Rullmann, J. A., MacArthur, M. W., Kaptain, R., and Thornton, J. M. (1996) J. Biomol. NMR 4, 477-486
33. Li, Y., Choi, M., Cavey, G., Daugherty, J., Suino, K., Kovach, A., Bingham, N. C., Kliewer, S. A., and Xu, H. E. (2005) Mol. Cell 17, 491-502
34. Ortlund, E. A., Lee, Y., Solomon, I. H., Hager, J. M., Safi, R., Choi, Y., Guan, Z., Tripathy, A., Raetz, C. R., McDonnell, D. P., Moore, D. D., and Redinbo, M. R. (2005) Nat. Struct. Mol. Biol. 12, 357-363
35. Wang, W., Zhang, C., Marimuthu, A., Krupka, H. I., Tabrizizad, M., Shelloe, R., Mehra, U., Eng, K., Nguyen, H., Settachatgul, C., Powell, B., Milburn, M. V., and West, B. L. (2005) Proc. Natl. Acad. Sci. U.S.A. 102, 7505-7510
36. Baker, K. D., Shewchuk, L. M., Kozlova, T., Makishima, M., Hassell, A., Wisely, B., Caravella, J. A., Lambert, M. H., Reinking, J. L., Krause, H., Thummel, C. S., Willson, T. M., and Mangelsdorf, D. J. (2003) Cell 113, 731-742
37. Wang, Z., Benoit, G., Liu, J., Prasad, S., Aarnisalo, P., Liu, X., Xu, H., Walker, N. P., and Perlmann, T. (2003) Nature 423, 555-560
38. Dundas, J., Ouyang, Z., Tseng, J., Binkowski, A., Turpaz, Y., and Liang, J. (2006) Nucleic Acids Res. 34, W116-W118
39. Iwema, T., Billas, I. M., Beck, Y., Bonneton, F., Nierengarten, H., Chaumot, A., Richards, G., Laudet, V., and Moras, D. (2007) EMBO J. 26, 3770-3782
40. Chiang, J. Y. (2005) Curr. Opin Investig. Drugs 6, 994-1001
41. Pearce, K. H., Iannone, M. A., Simmons, C. A., and Gray, J. G. (2004) Drug Discov. Today 9, 741-751
42. Kallenberger, B. C., Love, J. D., Chatterjee, V. K., and Schwabe, J. W. (2003) Nat. Struct. Biol. 10, 136-140
43. Woo, E. J., Jeong, D. G., Lim, M. Y., Jun Kim, S., Kim, K. J., Yoon, S. M., Park, B. C., and Ryu, S. E. (2007) J. Mol. Biol. 373, 735-744