p2 of Rice stripe virus (RSV) interacts with OsSGS3 and is a silencing suppressor

Molecular Plant Pathology

Volumn 12, Issue 8, 2011, Pages 808-814

  Du, Zhenguo ^a   Xiao, Donglai ^a   Wu, Jianguo ^a   Jia, Dongsheng ^a   Yuan, Zhengjie ^a   Liu, Ying ^a   Hu, Liuyang ^a   Han, Zhao ^a   Wei, Taiyun ^a   Lin, Qiying ^a   Wu, Zujian ^a   Xie, Lianhui ^a  

^a FUJIAN AGRICULTURE AND FORESTRY UNIVERSITY   (China)

Author keywords

[No Author keywords available]

Indexed keywords

VEGETABLE PROTEIN;

AMINO ACID SEQUENCE; ARTICLE; CHEMISTRY; GENE LIBRARY; GENETICS; METABOLISM; MICROBIOLOGY; MOLECULAR GENETICS; PATHOGENICITY; PHYSIOLOGY; RICE; RNA INTERFERENCE; SEQUENCE HOMOLOGY; TENUIVIRUS; TWO HYBRID SYSTEM;

AMINO ACID SEQUENCE; GENE LIBRARY; MOLECULAR SEQUENCE DATA; ORYZA SATIVA; PLANT PROTEINS; RNA INTERFERENCE; SEQUENCE HOMOLOGY, AMINO ACID; TENUIVIRUS; TWO-HYBRID SYSTEM TECHNIQUES;

ARABIDOPSIS; ARABIDOPSIS THALIANA; NICOTIANA BENTHAMIANA; POTATO VIRUS X; POTEXVIRUS; RICE STRIPE VIRUS;

EID: 80052417279     PISSN: 14646722     EISSN: 13643703     Source Type: Journal    
DOI: 10.1111/j.1364-3703.2011.00716.x     Document Type: Article

References (43)

1. Carthew, R.W. and Sontheimer, E.J. (2009) Origins and mechanisms of miRNAs and siRNAs. Cell, 136, 642-655.
2. Csorba, T., Bovi, A., Dalmay, T. and Burgya'n, J. (2007) The p122 subunit of Tobacco mosaic virus replicase is a potent silencing suppressor and compromises both small interfering RNA- and microRNA-mediated pathways. J. Virol. 81, 11768-11780.
3. Dalmay, T., Hamilton, A., Rudd, S., Angell, S. and Baulcombe, D.C. (2000) An RNA-dependent RNA polymerase gene in Arabidopsis is required for posttranscriptional gene silencing mediated by a transgene but not by a virus. Cell, 101, 543-553.
4. Díaz-Pendón, J.A. and Ding, S.W. (2008) Direct and indirect roles of viral suppressors of RNA silencing in pathogenesis. Annu. Rev. Phytopathol. 46, 303-326.
5. Ding, S.W. (2010) RNA-based antiviral immunity. Nat. Rev. Immunol. 10, 632-644.
6. Ding, S.W. and Voinnet, O. (2007) Antiviral immunity directed by small RNAs. Cell, 130, 413-426.
7. Fabozzi, G., Nabel, C.S., Dolan, M.A. and Sullivan, N.J. (2011) Ebolavirus proteins suppress siRNA effects by direct interaction with the mammalian RNAi pathway. J. Virol. 85, 2512-2523. Published ahead of print on 12 Jan 2011 doi: 10.1128/JVI.01160-10.
8. Falk, B.W. and Tsai, J.H. (1998) Biology and molecular biology of viruses in the genus Tenuivirus. Annu. Rev. Phytopathol. 36, 139-163.
9. Fukunaga, R. and Doudna, J.A. (2009) dsRNA with 5' overhangs contributes to endogenous and antiviral RNA silencing pathways in plants. EMBO J. 28, 545-555.
10. Garcia-Ruiz, H., Takeda, A., Chapman, E.J., Sullivan, C.M., Fahlgren, N., Brempelis, K.J. and Carrington, J.C. (2010) Arabidopsis RNA-dependent RNA polymerases and Dicer-like proteins in antiviral defense and small interfering RNA biogenesis during Turnip mosaic virus infection. Plant Cell, 22, 481-496.
11. Glick, E., Zrachya, A., Levy, Y., Mett, A., Gidoni, D., Belausov, E., Citovsky, V. and Gafni, Y. (2008) Interaction with host SGS3 is required for suppression of RNA silencing by tomato yellow leaf curl virus V2 protein. Proc. Natl. Acad. Sci. USA, 105, 157-161.
12. Hamilton, A., Voinnet, O., Chappell, L. and Baulcombe, D. (2002) Two classes of short interfering RNA in RNA silencing. EMBO J. 21, 4671-4679.
13. Kakutani, T., Hayano, Y., Hayashi, T. and Minobe, Y. (1990) Ambisense segment 4 of rice stripe virus: possible evolutionary relationship with phleboviruses and uukuviruses (Bunyaviridae). J. Gen. Virol. 71, 1427-1432.
14. Kakutani, T., Hayano, Y., Hayashi, T. and Minobe, Y. (1991) Ambisense segment 3 of rice stripe virus: the first case of a virus containing two ambisense segments. J. Gen. Virol. 72, 465-468.
15. Kumakura, N., Takeda, A., Fujioka, Y., Motose, H., Takano, R. and Watanabe, Y. (2009) SGS3 and RDR6 interact and colocalize in cytoplasmic SGS3/RDR6-bodies. FEBS Lett. 583, 1261-1266.
16. Lacombe, S., Bangratz, M., Vignols, F. and Brugidou, C. (2010) The rice yellow mottle virus P1 protein exhibits dual functions to suppress and activate gene silencing. Plant J. 61, 371-382.
17. Lakatos, L., Csorba, T., Pantaleo, V., Chapman, E.J., Carrington, J.C., Liu, Y.P., Dolja, V.V., Calvino, L.F., López-Moya, J.J. and Burgyán, J. (2006) Small RA binding is a common strategy to suppress RNA silencing by several viral suppressors. EMBO J. 25, 2768-2780.
18. Li, F. and Ding, S.W. (2006) Virus counterdefense: diverse strategies for evading the RNA-silencing immunity. Annu. Rev. Microbiol. 60, 503-531.
19. Liang, D., Ma, X., Qu, Z. and Hull, R. (2005) Nucleic acid binding property of the gene products of rice stripe virus. Virus Genes, 31, 203-209.
20. Liu, B., Chen, Z., Song, X., Liu, C., Cui, X., Zhao, X., Fang, J., Xu, W., Zhang, H., Wang, X., Chu, C., Deng, X., Xue, Y. and Cao, X. (2007) Oryza sativa dicer-like4 reveals a key role for small interfering RNA silencing in plant development. Plant Cell, 19, 2705-2718.
21. Lu, R., Folimonov, A., Shintaku, M., Li, W.X., Falk, B.W., Dawson, W.O. and Ding, S.W. (2004) Three distinct suppressors of RNA silencing en-coded by a 20kb viral RNA genome. Proc. Natl. Acad. Sci. USA, 101, 15742-15747.
22. Meng, C., Chen, J., Ding, S.W., Peng, J. and Wong, S.M. (2008) Hibiscus chlorotic ringspot virus coat protein inhibits trans-acting small interfering RNA biogenesis in Arabidopsis. J. Gen. Virol. 89, 2349-2358.
23. Mlotshwa, S., Pruss, G.J., Peragine, A., Endres, M.W., Li, J., Chen, X., Poethig, R.S., Bowman, L.H. and Vance, V. (2008) DICER-LIKE2 plays a primary role in transitive silencing of transgenes in Arabidopsis. PLoS ONE, 3, e1755.
24. Moissiard, G., Parizotto, E.A., Himber, C. and Voinnet, O. (2007) Transitivity in Arabidopsis can be primed, requires the redundant action of the antiviral dicer-like 4 and dicer-like 2, and is compromised by viral-encoded suppressor proteins. RNA, 13, 1268-1278.
25. Mourrain, P., Beclin, C., Elmayan, T., Feuerbach, F., Godon, C., Morel, J.-B., Jouette, D., Lacombe, A.M., Nikic, S., Picault, N., Remoue, K., Sanial, M., Vo, T.-A. and Vaucheret, H. (2000) Arabidopsis SGS2 and SGS3 genes are required for post transcriptional gene silencing and natural virus resistance. Cell, 101, 533-542.
26. Muangsan, N., Beclin, C., Vaucheret, H. and Robertson, D. (2004) Geminivirus VIGS of endogenous genes requires SGS2/SDE1 and SGS3 and defines a new branch in the genetic pathway for silencing in plants. Plant J. 38, 1004-1014.
27. Nagasaki, H., Itoh, J., Hayashi, K., Hibara, K., Satoh-Nagasawa, N., Nosaka, M., Mukouhata, M., Ashikari, M., Kitano, H., Matsuoka, M., Nagato, Y. and Sato, Y. (2007) The small interfering RNA production pathway is required for shoot meristem initiation in rice. Proc. Natl. Acad. Sci. USA, 104, 14867-14871.
28. Peragine, A., Yoshikawa, M., Wu, G., Albrecht, H.L. and Poethig, R.S. (2004) SGS3 and SGS2/SDE1/RDR6 are required for juvenile development and the production of trans-acting siRNAs in Arabidopsis. Genes Dev. 18, 2368-2379.
29. Qu, F. (2010) Antiviral role of plant-encoded RNA-dependent RNA polymerases revisited with deep sequencing of small interfering RNAs of virus origin. Mol. Plant-Microbe Interact. 23, 1248-1252.
30. Ramírez, B.C. and Haenni, A.L. (1994) Molecular biology of tenuiviruses, a remarkable group of plant viruses. J. Gen. Virol. 75, 467-475.
31. Shen, M., Xu, Y., Jia, R., Zhou, X. and Ye, K. (2010) Size-independent and noncooperative recognition of dsRNA by the rice stripe virus RNA silencing suppressor NS3. J. Mol. Biol. 404, 665-679.
32. Shimizu, T., Nakazono-Nagaoka, E., Uehara-Ichiki, T., Sasaya, T. and Omura, T. (2011) Targeting specific genes for RNA interference is crucial to the development of strong resistance to Rice stripe virus. Plant Biotechnol. J. 9, 503-512.
33. Shivaprasad, P.V., Rajeswaran, R., Blevins, T., Schoelz, J., Meins, F. Jr, Hohn, T. and Pooggin, M.M. (2008) The CaMV transactivator/viroplasmin interferes with RDR6-dependent trans-acting and secondary siRNA pathways in Arabidopsis. Nucleic Acids Res. 36, 5896-5909.
34. Takahashi, M., Toriyama, S., Hamamatsu, C. and Ishihama, A. (1993) Nucleotide sequence and possible ambisense coding strategy of rice stripe virus RNAsegment 2. J. Gen. Virol. 74, 769-773.
35. Toriyama, S., Takahashi, M., Sano, Y., Shimizu, T. and Ishihama, A. (1994) Nucleotide sequence of RNA 1, the largest genomic segment of rice stripe virus, the prototype of the tenuiviruses. J. Gen. Virol. 75, 3569-3579.
36. Vanitharani, R., Chellappan, P., Pita, J.S. and Fauquet, C.M. (2004) Differential roles of AC2 and AC4 of cassava geminiviruses in mediating synergism and suppression of posttranscriptional gene silencing. J. Virol. 78, 9487-9498.
37. Walter, M., Chaban, C., Schütze, K., Batistic, O., Weckermann, K., Näke, C., Blazevic, D., Grefen, C., Schumacher, K., Oecking, C., Harter, K. and Kudla, J. (2004) Visualization of protein interactions in living plant cells using bimolecular fluorescence complementation. Plant J. 40, 428-438.
38. Wang, X.-B., Wu, Q., Ito, T., Cillo, F., Li, W.-X., Chen, X., Yu, J.-L. and Ding, S.-W. (2010) RNAi-mediated viral immunity requires amplification of virus-derived siRNAs in Arabidopsis thaliana. Proc. Natl. Acad. Sci. USA, 107, 484-489.
39. Wassenegger, M. and Krczal, G. (2006) Nomenclature and functions of RNA-directed RNA polymerases. Trends Plant Sci. 11, 142-151.
40. Wu, Q.F., Wang, X.B. and Ding, S.W. (2010) Viral suppressors of RNA-based viral immunity: host targets. Cell Host Microbe, 8, 12-15.
41. Xiong, R., Wu, J., Zhou, Y. and Zhou, X. (2009) Characterization and subcellular localization of an RNA silencing suppressor encoded by Rice stripe tenuivirus. Virology, 387, 29-40.
42. Yan, F., Zhang, H., Adams, M.J., Yang, J., Peng, J., Antoniw, J.F., Zhou, Y. and Chen, J. (2010) Characterization of siRNAs derived from rice stripe virus in infected rice plants by deep sequencing. Arch. Virol. 155, 935-940.
43. Zhu, Y., Hayakawa, T., Toriyama, S. and Takahashi, M. (1991) Complete nucleotide sequence of RNA3 of rice stripe virus: an ambisense coding strategy. J. Gen. Virol. 72, 763-767.