-
1
-
-
0033736476
-
Genetic network inference: From co-expression clustering to reverse engineering
-
P. D'haeseleer, S. Liang, and R. Somogyi, "Genetic network inference: from co-expression clustering to reverse engineering", Bioinformatics, vol. 16, pp. 707-726, 2000.
-
(2000)
Bioinformatics
, vol.16
, pp. 707-726
-
-
D'haeseleer, P.1
Liang, S.2
Somogyi, R.3
-
2
-
-
0037461033
-
Dynamics modeling of genetic networks using genetic algorithm and S-system
-
DOI 10.1093/bioinformatics/btg027
-
S. Kikuchi, D. Tominaga, M. Arita, K. Takahashi, and M. Tomita, "Dynamic modeling of genetic networks using genetic algorithm", Bioinformatics, vol. 19, no. 5, pp. 643-650, 2003. (Pubitemid 36417059)
-
(2003)
Bioinformatics
, vol.19
, Issue.5
, pp. 643-650
-
-
Kikuchi, S.1
Tominaga, D.2
Arita, M.3
Takahashi, K.4
Tomita, M.5
-
3
-
-
20144387371
-
Inference of S-system models of genetic networks using a cooperative coevolutionary algorithm
-
DOI 10.1093/bioinformatics/bti071
-
S. Kimura, K. Ide, A. Kashihara, M. Kano, M. Hatakeyama, R. Masui, N. Nakagawa, S. Yokoyama, S. Kuramitsu, and A. Konagaya, "Inference of s-system models of genetic networks using cooperative coevolutionary algorithm", Bioinformatics, vol. 21, no. 7, pp. 1154-1163, 2005. (Pubitemid 40467940)
-
(2005)
Bioinformatics
, vol.21
, Issue.7
, pp. 1154-1163
-
-
Kimura, S.1
Ide, K.2
Kashihara, A.3
Kano, M.4
Hatakeyama, M.5
Masui, R.6
Nakagawa, N.7
Yokoyama, S.8
Kuramitsu, S.9
Konagaya, A.10
-
4
-
-
4344710012
-
Inference of genetic network using the expression profile time course data of mouse p19 cells
-
Y. Maki, T. Ueda, M. Okamoto, N. Uematsu, K. Inamura, K. Uchida, Y. Takahashi, and Y. Eguchi, "Inference of genetic network using the expression profile time course data of mouse p19 cells", Genome Informatics, vol. 13, pp. 382-383, 2002.
-
(2002)
Genome Informatics
, vol.13
, pp. 382-383
-
-
Maki, Y.1
Ueda, T.2
Okamoto, M.3
Uematsu, N.4
Inamura, K.5
Uchida, K.6
Takahashi, Y.7
Eguchi, Y.8
-
5
-
-
33747813950
-
Inferring regulatory systems with noisy pathway information
-
C. Spieth, F. Streichert, N. Speer, and A. Zell, "Inferring regulatory systems with noisy pathway information", Proceedings of the German Conference on Bioinformatics, pp. 193-204, 2005.
-
(2005)
Proceedings of the German Conference on Bioinformatics
, pp. 193-204
-
-
Spieth, C.1
Streichert, F.2
Speer, N.3
Zell, A.4
-
6
-
-
0003358217
-
Biochemical systems analysis
-
Addison-Wesley Publishing Company, Reading, Massachusetts
-
M. Savageau, Biochemical Systems Analysis. A Study of Function and Design in Molecular Biology, Addison-Wesley Publishing Company, Reading, Massachusetts, 1976.
-
(1976)
A Study of Function and Design in Molecular Biology
-
-
Savageau, M.1
-
7
-
-
36249019167
-
On the reconstruction of gene regulatory networks from noisy expression profiles
-
N. Noman and H. Iba, "On the Reconstruction of Gene Regulatory Networks from Noisy Expression Profiles", Proceeding of World Congress Computational Intelligence, pp. 8712-8719, 2006.
-
(2006)
Proceeding of World Congress Computational Intelligence
, pp. 8712-8719
-
-
Noman, N.1
Iba, H.2
-
8
-
-
33748530630
-
Reverse engineering genetic networks using evolutionary computation
-
N. Noman and H. Iba, "Reverse Engineering Genetic Networks Using Evolutionary Computation", Genome Informatics, vol. 16, no. 2, pp. 205-214, 2005.
-
(2005)
Genome Informatics
, vol.16
, Issue.2
, pp. 205-214
-
-
Noman, N.1
Iba, H.2
-
9
-
-
4444351989
-
Decoupling dynamical systems for pathway identification from metabolic profiles
-
DOI 10.1093/bioinformatics/bth140
-
E. O. Voit and J. S. Almeida, "Decoupling Dynamical Systems for Pathway Identification from Metabolic Profiles", Bioinformatics, vol. 20, no. 11, pp. 1670-1681, 2004. (Pubitemid 39172057)
-
(2004)
Bioinformatics
, vol.20
, Issue.11
, pp. 1670-1681
-
-
Voit, E.O.1
Almeida, J.2
-
10
-
-
77951547999
-
A prior knowledge based approach to infer gene regulatory networks
-
M. M. Hasan, N. Noman, H. Iba, "A prior knowledge based approach to infer gene regulatory networks", Proceedings of the International Symposium on Biocomputing, pp. 15-17, 2010.
-
(2010)
Proceedings of the International Symposium on Biocomputing
, pp. 15-17
-
-
Hasan, M.M.1
Noman, N.2
Iba, H.3
-
11
-
-
77952474901
-
Inference of gene regulatory networks using S-system: A unified approach
-
H. Wang, L. Qian, and E. Dougherty, "Inference of gene regulatory networks using S-system: a unified approach", IET System Biology, vol. 4, Issue. 2, pp. 145-156, 2010.
-
(2010)
IET System Biology
, vol.4
, Issue.2
, pp. 145-156
-
-
Wang, H.1
Qian, L.2
Dougherty, E.3
-
12
-
-
79959382451
-
Effective parameter estimation for S-system models using LPMs and evolutionary algorithms
-
S. Kimura, Y. Amano, K. Matsumura, M. Okada-Hatakeyama, "Effective parameter estimation for S-system models using LPMs and evolutionary algorithms", IEEE Congress on Evolutionary Computation pp. 1-8, 2010.
-
(2010)
IEEE Congress on Evolutionary Computation
, pp. 1-8
-
-
Kimura, S.1
Amano, Y.2
Matsumura, K.3
Okada-Hatakeyama, M.4
-
14
-
-
35048892031
-
Comparing genetic programming and evolution strategies on inferring gene regulatory networks
-
F. Streichert, H. Planatscher, C. Spieth, H. Ulmer, and A. Zell, "Comparing Genetic Programming and Strategies on inferring gene regulator networks", in Genetic and Evolutionary Computation Conference (GECCO), pp. 471-480, 2004. (Pubitemid 39747239)
-
(2004)
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
, vol.3102
, pp. 471-480
-
-
Streichert, F.1
Planatscher, H.2
Spieth, C.3
Ulmer, H.4
Zell, A.5
-
15
-
-
0000501656
-
Information theory and an extension of the maximum likelihood principle
-
H. Akaike, "Information theory and an extension of the maximum likelihood principle", Second Int. Symposium on Information Theory, pp. 267-281, 1973.
-
(1973)
Second Int. Symposium on Information Theory
, pp. 267-281
-
-
Akaike, H.1
-
16
-
-
33750281420
-
Inference of genetic networks using S-system: Information criteria for model selection
-
GECCO 2006 - Genetic and Evolutionary Computation Conference
-
N. Noman and H. Iba, "Inference of Genetic Networks using S-system: Information Criteria for Model Selection", Genetic and Evolutionary Computation Conference (GECCO), pp. 263-270, 2006. (Pubitemid 44611325)
-
(2006)
GECCO 2006 - Genetic and Evolutionary Computation Conference
, vol.1
, pp. 263-270
-
-
Noman, N.1
Iba, H.2
-
17
-
-
32444432616
-
Inference of gene regulatory networks using S-system and Differential Evolution
-
DOI 10.1145/1068009.1068079, GECCO 2005 - Genetic and Evolutionary Computation Conference
-
N. Noman and H. Iba, "Inference of Gene Regulatory Networks Using S-system and Differential Evolution", Genetic and Evolutionary Computation Conference (GECCO), pp. 439-446, 2005. (Pubitemid 43226322)
-
(2005)
GECCO 2005 - Genetic and Evolutionary Computation Conference
, pp. 439-446
-
-
Noman, N.1
Iba, H.2
-
18
-
-
36248948496
-
Inferring gene regulatory networks using differential evolution with local search heuristics
-
DOI 10.1109/TCBB.2007.1058
-
N. Noman and H. Iba, "Inferring Gene Regulatory Networks using Differential Evolution with Local Search Heuristics", IEEE/ACM Transactions on Computational Biology and Bioinformatics, vol. 4, no. 4, pp. 634-647, 2007. (Pubitemid 350125886)
-
(2007)
IEEE/ACM Transactions on Computational Biology and Bioinformatics
, vol.4
, Issue.4
, pp. 634-647
-
-
Noman, N.1
Iba, H.2
-
19
-
-
0043268702
-
A trigonometric mutation operation to differential evolution
-
H. Y. Fan and J. Lampinen, "A trigonometric mutation operation to differential evolution", Journal of Global Optimization, vol. 27, pp. 105-129, 2003.
-
(2003)
Journal of Global Optimization
, vol.27
, pp. 105-129
-
-
Fan, H.Y.1
Lampinen, J.2
-
20
-
-
75149166629
-
Reverse engineering gene regulatory network from microarray data using linear time-variant model
-
M. Kabir, N. Noman, Hitoshi Iba, "Reverse engineering gene regulatory network from microarray data using linear time-variant model", BMC Bioinformatics, vol. 11, no. 1, pp. 56-70, 2010.
-
(2010)
BMC Bioinformatics
, vol.11
, Issue.1
, pp. 56-70
-
-
Kabir, M.1
Noman, N.2
Iba, H.3
-
21
-
-
34547258546
-
Fuzzy model for gene regulatory network
-
1688479, 2006 IEEE Congress on Evolutionary Computation, CEC 2006
-
R. Ram, M. Chetty and T. I. Dix, "Fuzzy Model for Gene Regulatory Network", IEEE Congress on Evolutionary Computation, pp. 1450-1455, 2006. (Pubitemid 47130668)
-
(2006)
2006 IEEE Congress on Evolutionary Computation, CEC 2006
, pp. 1450-1455
-
-
Ram, E.1
Chetty, M.2
Dix, T.I.3
-
22
-
-
50249112012
-
Causal modeling of gene regulatory network
-
R. Ram, M. Chetty and T. I. Dix, "Causal Modeling of Gene Regulatory Network", Computational Intelligence and Bioinformatics and Computational Biology, CIBCB, pp. 1-8, 2006.
-
(2006)
Computational Intelligence and Bioinformatics and Computational Biology, CIBCB
, pp. 1-8
-
-
Ram, R.1
Chetty, M.2
Dix, T.I.3
-
24
-
-
0142000477
-
Differential Evolution - A Simple and Efficient Heuristic for Global Optimization over Continuous Spaces
-
R. Storn and K. V. Price, "Differential evolution - a simple and efficient heuristic for global optimization over continuous spaces", Journal of Global Optimization, vol. 11, pp. 341-359, 1997. (Pubitemid 127502202)
-
(1997)
Journal of Global Optimization
, vol.11
, Issue.4
, pp. 341-359
-
-
Storn, R.1
Price, K.2
|