메뉴 건너뛰기




Volumn 714, Issue 1-2, 2011, Pages 126-133

MicroRNA expression in the livers of inbred mice

Author keywords

Gene expression; Liver; MicroRNA; Mouse

Indexed keywords

DNA; MICRORNA;

EID: 80051812502     PISSN: 00275107     EISSN: 09218262     Source Type: Journal    
DOI: 10.1016/j.mrfmmm.2011.05.007     Document Type: Article
Times cited : (14)

References (52)
  • 1
    • 26944441255 scopus 로고    scopus 로고
    • Dicing and slicing: the core machinery of the RNA interference pathway
    • Hammond S.M. Dicing and slicing: the core machinery of the RNA interference pathway. FEBS Lett. 2005, 579:5822-5829.
    • (2005) FEBS Lett. , vol.579 , pp. 5822-5829
    • Hammond, S.M.1
  • 2
    • 0347444723 scopus 로고    scopus 로고
    • MicroRNAs: genomics, biogenesis, mechanism, and function
    • Bartel D.P. MicroRNAs: genomics, biogenesis, mechanism, and function. Cell 2004, 116:281-297.
    • (2004) Cell , vol.116 , pp. 281-297
    • Bartel, D.P.1
  • 3
    • 32444436121 scopus 로고    scopus 로고
    • Short RNAs repress translation after initiation in mammalian cells
    • Petersen C.P, Bordeleau M.E., Pelletier J., Sharp P.A. Short RNAs repress translation after initiation in mammalian cells. Mol. Cell 2006, 21:533-542.
    • (2006) Mol. Cell , vol.21 , pp. 533-542
    • Petersen, C.P.1    Bordeleau, M.E.2    Pelletier, J.3    Sharp, P.A.4
  • 5
    • 34250653704 scopus 로고    scopus 로고
    • MicroRNAs silence gene expression by repressing protein expression and/or by promoting mRNA decay
    • Behm-Ansmant I., Rehwinkel J., Izaurralde E. MicroRNAs silence gene expression by repressing protein expression and/or by promoting mRNA decay. Cold Spring Harb. Symp. Quant. Biol. 2006, 71:523-530.
    • (2006) Cold Spring Harb. Symp. Quant. Biol. , vol.71 , pp. 523-530
    • Behm-Ansmant, I.1    Rehwinkel, J.2    Izaurralde, E.3
  • 6
    • 74049088856 scopus 로고    scopus 로고
    • Lost in translation: an assessment and perspective for computational microRNA target identification
    • Alexiou P., Maragkakis M., Papadopoulos G.L., Reczko M., Hatzigeorgiou A.G. Lost in translation: an assessment and perspective for computational microRNA target identification. Bioinformatics 2009, 25:3049-3055.
    • (2009) Bioinformatics , vol.25 , pp. 3049-3055
    • Alexiou, P.1    Maragkakis, M.2    Papadopoulos, G.L.3    Reczko, M.4    Hatzigeorgiou, A.G.5
  • 8
    • 15244358503 scopus 로고    scopus 로고
    • Systematic discovery of regulatory motifs in human promoters and 3' UTRs by comparison of several mammals
    • Xie X., Lu J., Kulbokas E.J., Golub T.R., Mootha V., Lindblad-Toh K., Lander E.S., Kellis M. Systematic discovery of regulatory motifs in human promoters and 3' UTRs by comparison of several mammals. Nature 2005, 434:338-345.
    • (2005) Nature , vol.434 , pp. 338-345
    • Xie, X.1    Lu, J.2    Kulbokas, E.J.3    Golub, T.R.4    Mootha, V.5    Lindblad-Toh, K.6    Lander, E.S.7    Kellis, M.8
  • 9
    • 60149095444 scopus 로고    scopus 로고
    • Most mammalian mRNAs are conserved targets of microRNAs
    • Friedman R.C., Farh K.K., Burge C.B., Bartel D.P. Most mammalian mRNAs are conserved targets of microRNAs. Genome Res. 2008, 19:92-105.
    • (2008) Genome Res. , vol.19 , pp. 92-105
    • Friedman, R.C.1    Farh, K.K.2    Burge, C.B.3    Bartel, D.P.4
  • 10
    • 13944262052 scopus 로고    scopus 로고
    • A custom microarray platform for analysis of microRNA gene expression
    • Thomson J.M., Parker J., Perou C.M., Hammond S.M. A custom microarray platform for analysis of microRNA gene expression. Nat. Methods 2004, 1:47-53.
    • (2004) Nat. Methods , vol.1 , pp. 47-53
    • Thomson, J.M.1    Parker, J.2    Perou, C.M.3    Hammond, S.M.4
  • 13
    • 7044285911 scopus 로고    scopus 로고
    • Probing microRNAs with microarrays: tissue specificity and functional inference
    • Babak T., Zhang W., Morris Q., Blencowe B.J., Hughes T.R. Probing microRNAs with microarrays: tissue specificity and functional inference. RNA 2004, 10:1813-1819.
    • (2004) RNA , vol.10 , pp. 1813-1819
    • Babak, T.1    Zhang, W.2    Morris, Q.3    Blencowe, B.J.4    Hughes, T.R.5
  • 14
    • 47149088851 scopus 로고    scopus 로고
    • Individual mRNA expression profiles reveal the effects of specific microRNAs
    • Arora A., Simpson D.A. Individual mRNA expression profiles reveal the effects of specific microRNAs. Genome Biol. 2008, 9:R82.
    • (2008) Genome Biol. , vol.9
    • Arora, A.1    Simpson, D.A.2
  • 16
    • 13944260434 scopus 로고    scopus 로고
    • Microarray profiling of microRNAs reveals frequent coexpression with neighboring miRNAs and host genes
    • Baskerville S., Bartel D.P. Microarray profiling of microRNAs reveals frequent coexpression with neighboring miRNAs and host genes. RNA 2005, 11:241-247.
    • (2005) RNA , vol.11 , pp. 241-247
    • Baskerville, S.1    Bartel, D.P.2
  • 22
    • 69249230824 scopus 로고    scopus 로고
    • Replication and narrowing of gene expression quantitative trait loci using inbred mice
    • Gatti D.M., Harrill A.H., Wright F.A., Threadgill D.W., Rusyn I. Replication and narrowing of gene expression quantitative trait loci using inbred mice. Mamm. Genome 2009, 20:437-446.
    • (2009) Mamm. Genome , vol.20 , pp. 437-446
    • Gatti, D.M.1    Harrill, A.H.2    Wright, F.A.3    Threadgill, D.W.4    Rusyn, I.5
  • 29
    • 0036020892 scopus 로고    scopus 로고
    • A direct approach to false discovery rates
    • Storey J.D. A direct approach to false discovery rates. J. R. Stat. Soc. B 2002, 64:479-498.
    • (2002) J. R. Stat. Soc. B , vol.64 , pp. 479-498
    • Storey, J.D.1
  • 33
    • 60549083968 scopus 로고    scopus 로고
    • A microRNA, miR-101a, controls mammary gland development by regulating cyclooxygenase-2 expression
    • Tanaka T., Haneda S., Imakawa K., Sakai S., Nagaoka K. A microRNA, miR-101a, controls mammary gland development by regulating cyclooxygenase-2 expression. Differentiation 2009, 77:181-187.
    • (2009) Differentiation , vol.77 , pp. 181-187
    • Tanaka, T.1    Haneda, S.2    Imakawa, K.3    Sakai, S.4    Nagaoka, K.5
  • 35
    • 61949109425 scopus 로고    scopus 로고
    • Hepatic function is preserved in the absence of mature microRNAs
    • Hand N.J., Master Z.R., Le Lay J., Friedman J.R. Hepatic function is preserved in the absence of mature microRNAs. Hepatology 2009, 49:618-626.
    • (2009) Hepatology , vol.49 , pp. 618-626
    • Hand, N.J.1    Master, Z.R.2    Le Lay, J.3    Friedman, J.R.4
  • 36
    • 66149120204 scopus 로고    scopus 로고
    • Disruption of Dicer1 induces dysregulated fetal gene expression and promotes hepatocarcinogenesis
    • Sekine S., Ogawa R., Ito R., Hiraoka N., McManus M.T., Kanai Y., Hebrok M. Disruption of Dicer1 induces dysregulated fetal gene expression and promotes hepatocarcinogenesis. Gastroenterology 2009, 136:2304-2315.
    • (2009) Gastroenterology , vol.136 , pp. 2304-2315
    • Sekine, S.1    Ogawa, R.2    Ito, R.3    Hiraoka, N.4    McManus, M.T.5    Kanai, Y.6    Hebrok, M.7
  • 37
    • 33645472191 scopus 로고    scopus 로고
    • Systematic identification of microRNA functions by combining target prediction and expression profiling
    • Wang X., Wang X. Systematic identification of microRNA functions by combining target prediction and expression profiling. Nucleic Acids Res. 2006, 34:1646-1652.
    • (2006) Nucleic Acids Res. , vol.34 , pp. 1646-1652
    • Wang, X.1    Wang, X.2
  • 39
    • 77953312769 scopus 로고    scopus 로고
    • Joint genome-wide profiling of miRNA and mRNA expression in Alzheimer's disease cortex reveals altered miRNA regulation
    • Nunez-Iglesias J., Liu C.C., Morgan T.E., Finch C.E., Zhou X.J. Joint genome-wide profiling of miRNA and mRNA expression in Alzheimer's disease cortex reveals altered miRNA regulation. PLoS One 2010, 5:e8898.
    • (2010) PLoS One , vol.5
    • Nunez-Iglesias, J.1    Liu, C.C.2    Morgan, T.E.3    Finch, C.E.4    Zhou, X.J.5
  • 40
    • 67149144218 scopus 로고    scopus 로고
    • Methods for the inference of biological pathways and networks
    • Bumgarner R.E., Yeung K.Y. Methods for the inference of biological pathways and networks. Methods Mol. Biol. 2009, 541:225-245.
    • (2009) Methods Mol. Biol. , vol.541 , pp. 225-245
    • Bumgarner, R.E.1    Yeung, K.Y.2
  • 42
    • 77956995581 scopus 로고    scopus 로고
    • Alterations of microRNAs and their targets are associated with acquired resistance of MCF-7 breast cancer cells to cisplatin
    • Pogribny I.P., Filkowski J.N., Tryndyak V.P., Golubov A., Shpyleva S.I., Kovalchuk O. Alterations of microRNAs and their targets are associated with acquired resistance of MCF-7 breast cancer cells to cisplatin. Int. J. Cancer 2010, 127:1785-1794.
    • (2010) Int. J. Cancer , vol.127 , pp. 1785-1794
    • Pogribny, I.P.1    Filkowski, J.N.2    Tryndyak, V.P.3    Golubov, A.4    Shpyleva, S.I.5    Kovalchuk, O.6
  • 44
    • 60749094708 scopus 로고    scopus 로고
    • The tumor-promoting activity of 2-acetylaminofluorene is associated with disruption of the p53 signaling pathway and the balance between apoptosis and cell proliferation
    • Pogribny I.P., Muskhelishvili L., Tryndyak V.P., Beland F.A. The tumor-promoting activity of 2-acetylaminofluorene is associated with disruption of the p53 signaling pathway and the balance between apoptosis and cell proliferation. Toxicol. Appl. Pharmacol. 2009, 235:305-311.
    • (2009) Toxicol. Appl. Pharmacol. , vol.235 , pp. 305-311
    • Pogribny, I.P.1    Muskhelishvili, L.2    Tryndyak, V.P.3    Beland, F.A.4
  • 45
    • 38049046644 scopus 로고    scopus 로고
    • Systematic evaluation of microRNA processing patterns in tissues, cell lines, and tumors
    • Lee E.J., Baek M., Gusev Y., Brackett D.J., Nuovo G.J., Schmittgen T.D. Systematic evaluation of microRNA processing patterns in tissues, cell lines, and tumors. RNA 2008, 14:35-42.
    • (2008) RNA , vol.14 , pp. 35-42
    • Lee, E.J.1    Baek, M.2    Gusev, Y.3    Brackett, D.J.4    Nuovo, G.J.5    Schmittgen, T.D.6
  • 46
    • 77957259450 scopus 로고    scopus 로고
    • Difference in expression of hepatic microRNAs miR-29c, miR-34a, miR-155, and miR-200b is associated with strain-specific susceptibility to dietary nonalcoholic steatohepatitis in mice
    • Pogribny I.P, Starlard-Davenport A., Tryndyak V.P., Han T., Ross S.A., Rusyn I., Beland F.A. Difference in expression of hepatic microRNAs miR-29c, miR-34a, miR-155, and miR-200b is associated with strain-specific susceptibility to dietary nonalcoholic steatohepatitis in mice. Lab. Invest. 2010, 90:1437-1446.
    • (2010) Lab. Invest. , vol.90 , pp. 1437-1446
    • Pogribny, I.P.1    Starlard-Davenport, A.2    Tryndyak, V.P.3    Han, T.4    Ross, S.A.5    Rusyn, I.6    Beland, F.A.7
  • 47
    • 65749109370 scopus 로고    scopus 로고
    • Down-regulation of the microRNAs miR-34a, miR-127, and miR-200b in rat liver during hepatocarcinogenesis induced by a methyl-deficient diet
    • Tryndyak V.P., Ross S.A., Beland F.A., Pogribny I.P. Down-regulation of the microRNAs miR-34a, miR-127, and miR-200b in rat liver during hepatocarcinogenesis induced by a methyl-deficient diet. Mol. Carcinogen. 2009, 48:479-487.
    • (2009) Mol. Carcinogen. , vol.48 , pp. 479-487
    • Tryndyak, V.P.1    Ross, S.A.2    Beland, F.A.3    Pogribny, I.P.4
  • 48
    • 34250163202 scopus 로고    scopus 로고
    • Peroxisome proliferator-activated receptor alpha regulates a microRNA-mediated signaling cascade responsible for hepatocellular proliferation
    • Shah Y.M, Morimura K., Yang Q., Tanabe T., Takagi M., Gonzalez F.J. Peroxisome proliferator-activated receptor alpha regulates a microRNA-mediated signaling cascade responsible for hepatocellular proliferation. Mol. Cell. Biol. 2007, 27:4238-4247.
    • (2007) Mol. Cell. Biol. , vol.27 , pp. 4238-4247
    • Shah, Y.M.1    Morimura, K.2    Yang, Q.3    Tanabe, T.4    Takagi, M.5    Gonzalez, F.J.6
  • 49
    • 35648945351 scopus 로고    scopus 로고
    • Changes of micro-RNA expression in rat liver treated by acetaminophen or carbon tetrachloride-regulating role of micro-RNA for RNA expression
    • Fukushima T., Hamada Y., Yamada H., Horii I. Changes of micro-RNA expression in rat liver treated by acetaminophen or carbon tetrachloride-regulating role of micro-RNA for RNA expression. J. Toxicol. Sci. 2007, 32:401-409.
    • (2007) J. Toxicol. Sci. , vol.32 , pp. 401-409
    • Fukushima, T.1    Hamada, Y.2    Yamada, H.3    Horii, I.4
  • 50
    • 40049098302 scopus 로고    scopus 로고
    • Emerging fundamental roles for non-coding RNA species in toxicology
    • Taylor E.L., Gant T.W. Emerging fundamental roles for non-coding RNA species in toxicology. Toxicology 2008, 246:34-39.
    • (2008) Toxicology , vol.246 , pp. 34-39
    • Taylor, E.L.1    Gant, T.W.2
  • 51
    • 67649202201 scopus 로고    scopus 로고
    • Population-based discovery of toxicogenomics biomarkers for hepatotoxicity using a laboratory strain diversity panel
    • Harrill A.H., Ross P.K., Gatti D.M., Threadgill D.W., Rusyn I. Population-based discovery of toxicogenomics biomarkers for hepatotoxicity using a laboratory strain diversity panel. Toxicol. Sci. 2009, 110:235-243.
    • (2009) Toxicol. Sci. , vol.110 , pp. 235-243
    • Harrill, A.H.1    Ross, P.K.2    Gatti, D.M.3    Threadgill, D.W.4    Rusyn, I.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.