β-Glucosidases from a new Aspergillus species can substitute commercial β-glucosidases for saccharification of lignocellulosic biomass

Canadian Journal of Microbiology

Volumn 57, Issue 8, 2011, Pages 638-650

  Sørensen, Annette ^a,b   Lübeck, Peter Stephensen ^a   Lübeck, Mette ^a   Teller, Philip Johan ^b   Ahring, Birgitte Kiær ^a,b  

^a AALBORG UNIVERSITY   (Denmark)

^b WASHINGTON STATE UNIVERSITY   (United States)

Author keywords

Glucosidase; Aspergillus; Cellic CTec; Enzyme kinetics; Novozym 188; Screening

Indexed keywords

ASPERGILLUS NIGER; BIOPRODUCTS; CELLIC CTEC; CELLOBIOSE; COMMERCIAL ENZYMES; COST SAVING; DIRECT USE; ENZYME PREPARATION; FERMENTATION BROTHS; FUNGAL FERMENTATIONS; GLUCOSIDASE; GLUCOSIDASE ACTIVITY; LIGNOCELLULOSIC BIOMASS; MICHAELIS-MENTEN KINETIC; MONOMERIC SUGARS; NOVOZYMES; PRODUCT INHIBITION; SCREENING PROGRAMS; SPECIFIC ACTIVITY; THERMAL ACTIVITY; TOTAL PROTEIN;

ENZYME KINETICS; FERMENTATION; SACCHARIFICATION; SUGARS;

ASPERGILLUS;

BETA GLUCOSIDASE; LIGNOCELLULOSE;

BIOFUEL; BIOMASS; BIOTECHNOLOGY; CELLULOSE; ENZYME ACTIVITY; FERMENTATION; FUNGUS; HYDROLYSIS; INHIBITION; LIGNIN; NEW SPECIES; REACTION KINETICS; SUGAR;

ARTICLE; ASPERGILLUS; BIOMASS; CONTROLLED STUDY; ENZYME ACTIVITY; FERMENTATION; FUNGAL STRAIN; FUSARIUM; HYDROLYSIS; MICHAELIS MENTEN KINETICS; NONHUMAN; PENICILLIUM; PH; PRIORITY JOURNAL; SACCHARIFICATION; SCREENING; TEMPERATURE; THERMOSTABILITY; TRICHODERMA; WHEAT BRAN;

ASPERGILLUS; ASPERGILLUS NIGER; BETA-GLUCOSIDASE; BIOMASS; CELLOBIOSE; CELLULASES; CELLULOSE; DEXTRINS; DNA, FUNGAL; DNA, RIBOSOMAL SPACER; FERMENTATION; HYDROLYSIS; INDUSTRIAL MICROBIOLOGY;

ASPERGILLUS; ASPERGILLUS NIGER; FUNGI;

EID: 79961221014     PISSN: 00084166     EISSN: 14803275     Source Type: Journal    
DOI: 10.1139/w11-052     Document Type: Article

References (44)

1. Ahring, B.K., and Langvad, N.B. 2008. Sustainable low cost production of lignocellulosic bioethanol - "The carbon slaughterhouse". A process concept developed by BioGasol. Int. Sugar J. 110(1311): 184-190.
2. Ali, S. 2004. Studies of the submerged fermentation of citric acid by Aspergillus niger in stirred fermentor. Ph.D. thesis, Department of Botany, University of the Punjab, Lahore, Pakistan.
3. Altschul, S.F., Madden, T.L., Schaffer, A.A., Zhang, J.H., Zhang, Z., Miller, W., and Lipman, D.J. 1997. Gapped BLAST and PSIBLAST: a new generation of protein database search programs. Nucleic Acids Res. 25(17): 3389-3402. doi:10.1093/nar/25.17.3389.PMID:9254694.
4. Béguin, P., and Aubert, J.P. 1994. The biological degradation of cellulose. FEMS Microbiol. Rev. 13(1): 25-58. doi:10.1111/j.1574-6976.1994.tb00033.x.PMID:8117466.
5. Benson, D.A., Karsch-Mizrachi, I., Lipman, D.J., Ostell, J., and Wheeler, D.L. 2004. GenBank: update. Nucleic Acids Res. 32: D23-D26. doi:10.1093/nar/gkh045.PMID:14681350.
6. Berlin, A., Gilkes, N., Kilburn, D., Bura, R., Markov, A., Skomarovsky, A., 2005. Evaluation of novel fungal cellulose preparations for ability to hydrolyze softwood substrates -evidence for the role of accessory enzymes. Enzyme Microb. Technol. 37(2): 175-184. doi:10.1016/j.enzmictec.2005.01.039.
7. Bisswanger, H. 2008. Temperature dependence. In Enzyme kinetics, principles and methods. 2nd ed. WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim, Germany. pp. 154-158.
8. Bulat, S.A., Lübeck, M., Mironenko, N., Jensen, D.F., and Lübeck, P. S. 1998. UP-PCR analysis and ITS1 ribotyping of strains of Trichoderma and Gliocladium. Mycol. Res. 102(8): 933-943. doi:10.1017/S0953756297005686.
9. Cerqueira Leite, R.C., Verde Leal, M.R.L., Barbosa Cortez, L.A., Griffin, W.M., and Gaya Scandiffio, M.I. 2009. Can Brazil replace 5% of the 2025 gasoline world demand with ethanol? Energy, 34(5): 655-661. doi:10.1016/j.energy.2008.11.001.
10. Danielsen, S. 1997. Characterization of Fusarium moniliforme from maize from Costa Rica and approaches to biocontrol. Ph.D. thesis, Department of Plant Biology, KU-LIFE, University of Copenhagen, Denmark.
11. de Vries, R.P., and Visser, J. 2001. Aspergillus enzymes involved in degradation of plant cell wall polysaccharides. Microbiol. Mol. Biol. Rev. 65(4): 497-522. doi:10.1128/MMBR.65.4.497-522.2001.PMID:11729262.
12. Dekker, R.F.H. 1986. Kinetic, inhibition, and stability properties of a commercial β-D-glucosidase (cellobiase) preparation from Aspergillus niger and its suitability in the hydrolysis of lignocellulose. Biotechnol. Bioeng. 28(9): 1438-1442. doi:10.1002/bit.260280918.PMID:18561233.
13. Dellaporta, S.L., Wood, J., and Hicks, J.B. 1983. A plant DNA minipreparation: version II. Plant Mol. Biol. Rep. 1(4): 19-21. doi:10.1007/BF02712670.
14. Djarwanto, and Tachibana, S. 2009. Screening for fungi capable of degrading lignocellulose from plantation forests. Pak. J. Biol. Sci. 12(9): 669-675. doi:10.3923/pjbs.2009.669.675.PMID:19634469.
15. Eyzaguirre, J., Hidalgo, M., and Leschot, A. 2005. β-Glucosidases from filamentous fungi: properties, structure, and applications. Chap. 23. In Handbook of carbohydrate engineering. Edited by K. J. Yarema, Taylor and Francis Group, LLC, New York, USA. pp. 645-685.
16. Faezi-Ghasemi, M., Bakhtiari, M.R., Fallahpour, M., Noohi, A., Nasrin, M., and Amidi, Z. 2004. Screening of urease production by Aspergillus niger strains. Iran. Biomed. J. 8(1): 47-50.
17. Jäger, S., Brumbauer, A., Fehér, E., Réczey, K., and Kiss, L. 2001. Production and characterization of β-glucosidases from different Aspergillus strains. World J. Microbiol. Biotechnol. 17(5): 455-461. doi:10.1023/A:1011948405581.
18. Jahangeer, S., Khan, N., Jahangeer, S., Sohail, M., Shahzad, S., Ahmad, A., and Khan, S.A. 2005. Screening and characterization of fungal cellulases isolated from the native environmental source. Pak. J. Bot. 37(3): 739-748.
19. Kawai, Y., Otaka, M., Kakio, M., Oeda, Y., Inoue, N., and Shinano, H. 1994. Screening of antioxidant-producing fungi in Aspergillus niger group for liquid- and solid-state fermentation. Bull. Fac. Fish. Hokkaido Univ. 45(1): 26-31.
20. Kent, N.L., and Evers, A.D. 1994. Nutrition. In Kent's technology of cereals: an introduction for students of food science and agriculture. 4th ed. Woodhead Publishing, Cambridge, UK. pp. 276-301.
21. Khan, A.W., Meek, E., and Henschel, J.R. 1985. β-D-Glucosidase - multiplicity of activities and significance to enzymic saccharification of cellulose. Enzyme Microb. Technol. 7(9): 465-467. doi:10.1016/0141-0229(85)90050-X.
22. Kim, K.H., Brown, K.M., Harris, P.V., Langston, J.A., and Cherry, J. R. 2007a. A proteomics strategy to discover β-glucosidases from Aspergillus fumigatus with two-dimensional page in-gel activity assay and tandem mass spectrometry. J. Proteome Res. 6(12): 4749-4757. doi:10.1021/pr070355i.PMID:18020405.
23. Kim, S.J., Lee, C.M., Kim, M.Y., Yeo, Y.S., Yoon, S.H., Kang, H.C., and Koo, B.S. 2007b. Screening and characterization of an enzyme with β-glucosidase activity from environmental DNA. J. Microbiol. Biotechnol. 17(6): 905-912. PMID:18050907.
24. Krogh, K.B.R., Mørkeberg, A., Jørgensen, H., Frisvad, J.C., and Olsson, L. 2004. Screening genus Penicillium for producers of cellulolytic and xylanolytic enzymes. Appl. Biochem. Biotechnol. 113-116(1-3): 389-401. doi:10.1385/ABAB:114:1-3:389.PMID:15054266.
25. Krogh, K.B.R.M., Harris, P.V., Olsen, C.L., Johansen, K.S., Hojer-Pedersen, J., Borjesson, J., and Olsson, L. 2010. Characterization and kinetic analysis of a thermostable GH3 β-glucosidase from Penicillium brasilianum. Appl. Microbiol. Biotechnol. 86(1): 143-154. doi:10.1007/s00253-009-2181-7.PMID:19756584.
26. Lübeck, M., and Poulsen, H. 2001. UP-PCR cross blot hybridization as a tool for identification of anastomosis groups in the Rhizoctonia solani complex. FEMS Microbiol. Lett. 201(1): 83-89. doi:10.1016/S0378-1097(01)00245-2.PMID:11445172.
27. Novozymes. 2010. Cellic CTec2 and HTec2 - enzymes for hydrolysis of lignocellulosic materials. Bagsvaerd, Denmark.
28. Pedersen, M., Hollensted, M., Lange, L., and Andersen, B. 2009. Screening for cellulose and hemicellulose degrading enzymes from the fungal genus Ulocladium. Int. Biodeterior. Biodegrad. 63(4): 484-489. doi:10.1016/j.ibiod.2009.01.006.
29. Ribeiro Leite, R.S., Ferreira Alves-Prado, H., Cabral, H., Pagnocca, F.C., Gomes, E., and Da-Silva, R. 2008. Production and characteristics comparison of crude β-glucosidases produced by microorganisms Thermoascus aurantiacus e Aureobasidium pullulans in agricultural wastes. Enzyme Microb. Technol. 43(6): 391-395. doi:10.1016/j.enzmictec.2008.07.006.
30. Sakamoto, R., Arai, M., and Murao, S. 1985. Enzymic properties of 3 β-glucosidases from Aspergillus aculeatus No-F-50. Agric. Biol. Chem. 49(5): 1283-1290.
31. Samson, R.A., Hoekstra, E.S., and Frisvad, J.C. 2004. Introduction to food- and airborne fungi. Centralbureau voor Schimmelcultures, Utrecht, Netherlands.
32. Sarrocco, S., Mikkelsen, L., Vergara, M., Jensen, D.F., Lübeck, M., and Vannacci, G. 2006. Histopathological studies of sclerotia of phytopathogenic fungi parasitized by a GFP transformed Trichoderma virens antagonistic strain. Mycol. Res. 110(2): 179-187. doi:10.1016/j.mycres.2005.08.005.PMID:16388938.
33. Schiller, M., Lübeck, M., Sundelin, T., Melendez, L.F.C., Danielsen, S., Funck Jensen, D., and Madriz Ordeñana, K. 2006. Two subpopulations of Colletotrichum acutatum are responsible for anthracnose in strawberry and leatherleaf fern in Costa Rica. Eur. J. Plant Pathol. 116(2): 107-118. doi:10.1007/s10658-006-9045-0.
34. Seidle, H.F., Marten, I., Shoseyov, O., and Huber, R.E. 2004. Physical and kinetic properties of the family 3 β-glucosidase from Aspergillus niger which is important for cellulose breakdown. Protein J. 23(1): 11-23. doi:10.1023/B:JOPC.0000016254.58189.2a.PMID:15115178.
35. Soccol, C.R., de Souza Vandenberghe, L.P., Pedroni Medeiros, A.B., Karp, S.G., Buckeridge, M., Ramos, L.P., 2010. Bioethanol from lignocelluloses: status and perspectives in Brazil. Bioresour. Technol. 101(13): 4820-4825. doi:10.1016/j.biortech.2009.11.067.PMID:20022746.
36. Sørensen, A., Lübeck, P.S., Lübeck, M., Nielsen, K.F., Ahring, B.K., Teller, P.J., and Frisvad, J.C. 2011a. Aspergillus saccharolyticus sp. nov., a new black Aspergillus species isolated in Denmark. Int. J. Syst. Evol. Microbiol. doi:10.1099/ijs.0.029884-0.PMID:21335500.
37. Sørensen, A., Teller, P.J., Lübeck, P.S., and Ahring, B.K. 2011b. Onsite enzyme production during bioethanol production from biomass: screening for suitable fungal strains. Appl. Biochem. Biotechnol. doi:10.1007/s12010-011-9194-2.PMID:21360092.
38. Sternberg, D., Vijayakumar, P., and Reese, E.T. 1977. β-Glucosidase-microbial production and effect on enzymatic hydrolysis of cellulose. Can. J. Microbiol. 23(2): 139-147. doi:10.1139/m77-020.PMID:837251.
39. Sundelin, T., Schiller, M., L̈beck, M., Jensen, D.F., Paaske, K., and Petersen, B.D. 2005. First report of anthracnose fruit rot caused by Colletotrichum acutatum on strawberry in Denmark. Plant Dis. 89(4): 432. doi:10.1094/PD-89-0432B.
40. Takó, M., Farkas, E., Lung, S., Krisch, J., Vágvölgyi, C., and Papp, T. 2010. Identification of acid- and thermotolerant extracellular bglucosidase activities in zygomycetes fungi. Acta Biol. Hung. 61(1): 101-110. doi:10.1556/ABiol.61.2010.1.10.PMID:20194103.
41. Tobiasen, C., Aahman, J., Ravnholt, K.S., Bjerrum, M.J., Grell, M. N., and Giese, H. 2007. Nonribosomal peptide synthetase (NPS) genes in Fusarium graminearum, F. culmorum and F. pseudograminearium and identification of NPS2 as the producer of ferricrocin. Curr. Genet. 51(1): 43-58. doi:10.1007/s00294-006-0103-0.PMID:17043871.
42. Ward, O.P., Qin, W.M., Dhanjoon, J., Ye, J., and Singh, A. 2006. Physiology and biotechnology of Aspergillus. Adv. Appl. Microbiol. 58: 1-75. doi:10.1016/S0065-2164(05)58001-8.PMID:16509442.
43. White, T.J., Bruns, T., Lee, S., and Taylor, J.W. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In PCR protocols: a guide to methods and applications. Edited by M.A. Innis, D.H. Gelfand, J.J. Sninsky and T.J. White. Academic Press Inc., New York. pp. 315-322.
44. Zhang, Y.-H.P., Himmel, M.E., and Mielenz, J.R. 2006. Outlook for cellulase improvement: screening and selection strategies. Biotechnol. Adv. 24(5): 452-481. doi:10.1016/j.biotechadv.2006.03.003.PMID:16690241.