-
1
-
-
33747866099
-
DISULFIND: A disulfide bonding state and cysteine connectivity prediction server
-
Ceroni A, Passerini A, Vullo A, Frasconi P (2006). DISULFIND: A disulfide bonding state and cysteine connectivity prediction server. Nucleic Acids Res. 34: W177-181.
-
(2006)
Nucleic Acids Res.
, vol.34
-
-
Ceroni, A.1
Passerini, A.2
Vullo, A.3
Frasconi, P.4
-
2
-
-
30344441483
-
Nutritional and safety assessments of foods and feeds nutritionally improved through biotechnology
-
Chassy B, Hlywka JJ, Kleter GA, Kok EJ, Kuiper HA, McGloughlin M, Munro IC, Phipps RH, Reid JE, Stein J, Zabik J (2005). Nutritional and safety assessments of foods and feeds nutritionally improved through biotechnology. Food Nutr. Bull. 26: 436-442.
-
(2005)
Food Nutr. Bull.
, vol.26
, pp. 436-442
-
-
Chassy, B.1
Hlywka, J.J.2
Kleter, G.A.3
Kok, E.J.4
Kuiper, H.A.5
McGloughlin, M.6
Munro, I.C.7
Phipps, R.H.8
Reid, J.E.9
Stein, J.10
Zabik, J.11
-
5
-
-
48849113878
-
Comparative protein structure modeling using MODELLER
-
Unit 2
-
Eswar N, Webb B, Marti-Renom MA, Madhusudhan MS, Eramian D, Shen MY, Pieper U, Sali A (2007). Comparative protein structure modeling using MODELLER. Curr Protoc. Protein Sci. Chapter 2: Unit 2 9.
-
(2007)
Curr Protoc. Protein Sci. Chapter
, vol.2
, pp. 9
-
-
Eswar, N.1
Webb, B.2
Marti-Renom, M.A.3
Madhusudhan, M.S.4
Eramian, D.5
Shen, M.Y.6
Pieper, U.7
Sali, A.8
-
6
-
-
23144437891
-
DiANNA: A web server for disulfide connectivity prediction
-
Ferre F, Clote P (2005). DiANNA: A web server for disulfide connectivity prediction. Nucleic Acids Res. 33: W230-232.
-
(2005)
Nucleic Acids Res
, vol.33
-
-
Ferre, F.1
Clote, P.2
-
7
-
-
33748878164
-
Methods for predicting bacterial protein subcellular localization
-
Gardy JL, Brinkman FS (2006). Methods for predicting bacterial protein subcellular localization. Nat. Rev. Microbiol. 4: 741-751.
-
(2006)
Nat. Rev. Microbiol.
, vol.4
, pp. 741-751
-
-
Gardy, J.L.1
Brinkman, F.S.2
-
8
-
-
33750957457
-
Bacteriocin diversity and the frequency of multiple bacteriocin production in Escherichia coli
-
Gordon DM, O'Brien CL (2006). Bacteriocin diversity and the frequency of multiple bacteriocin production in Escherichia coli. Microbiology, 152: 3239-3244.
-
(2006)
Microbiology
, vol.152
, pp. 3239-3244
-
-
Gordon, D.M.1
O'Brien, C.L.2
-
9
-
-
0000620353
-
Sur un remarquable example d'antagonisme entre deux souches de colibacille
-
Gratia A (1925). Sur un remarquable example d'antagonisme entre deux souches de colibacille. Compt. Rend. Soc. Biol. 93: 1040-1042.
-
(1925)
Compt. Rend. Soc. Biol.
, vol.93
, pp. 1040-1042
-
-
Gratia, A.1
-
10
-
-
33645124655
-
A novel bacteriocin, thuricin 17, produced by plant growth promoting rhizobacteria strain Bacillus thuringiensis NEB17: Isolation and classification
-
Gray EJ, Lee KD, Souleimanov AM, Di Falco MR, Zhou X, Ly A, Charles TC, Driscoll BT, Smith DL (2006). A novel bacteriocin, thuricin 17, produced by plant growth promoting rhizobacteria strain Bacillus thuringiensis NEB17: Isolation and classification. J. Appl. Microbiol. 100: 545-554.
-
(2006)
J. Appl. Microbiol.
, vol.100
, pp. 545-554
-
-
Gray, E.J.1
Lee, K.D.2
Souleimanov, A.M.3
di Falco, M.R.4
Zhou, X.5
Ly, A.6
Charles, T.C.7
Driscoll, B.T.8
Smith, D.L.9
-
11
-
-
0030034468
-
Cell-to-cell signaling in the symbiotic nitrogen-fixing bacterium Rhizobium leguminosarum: Autoinduction of a stationary phase and rhizosphere-expressed genes
-
Gray KM, Pearson JP, Downie JA, Boboye BE, Greenberg EP (1996). Cell-to-cell signaling in the symbiotic nitrogen-fixing bacterium Rhizobium leguminosarum: Autoinduction of a stationary phase and rhizosphere-expressed genes. J. Bacteriol. 178: 372-376.
-
(1996)
J. Bacteriol.
, vol.178
, pp. 372-376
-
-
Gray, K.M.1
Pearson, J.P.2
Downie, J.A.3
Boboye, B.E.4
Greenberg, E.P.5
-
12
-
-
23044465694
-
Symbiotic effectiveness and bacteriocin production by Rhizobium leguminosarum bv. viciae isolated from agriculture soils in Faisalabad
-
Hafeez FY, Naeem FI, Naeem R, Zaidi AH, Malik KA (2005). Symbiotic effectiveness and bacteriocin production by Rhizobium leguminosarum bv. viciae isolated from agriculture soils in Faisalabad Environ. Exp. Bot. 54: 142-147.
-
(2005)
Environ. Exp. Bot.
, vol.54
, pp. 142-147
-
-
Hafeez, F.Y.1
Naeem, F.I.2
Naeem, R.3
Zaidi, A.H.4
Malik, K.A.5
-
13
-
-
0027199706
-
Genetics of bacteriocins produced by lactic acid bacteria
-
Klaenhammer TR (1993). Genetics of bacteriocins produced by lactic acid bacteria. FEMS Microbiol Rev. 12: 39-85.
-
(1993)
FEMS Microbiol Rev
, vol.12
, pp. 39-85
-
-
Klaenhammer, T.R.1
-
14
-
-
36448991500
-
Clustal W and Clustal X version 2.0
-
Larkin MA, Blackshields G, Brown NP, Chenna R, McGettigan PA, McWilliam H, Valentin F, Wallace IM, Wilm A, Lopez R, Thompson JD, Gibson TJ, Higgins DG (2007). Clustal W and Clustal X version 2.0. Bioinformatics, 23: 2947-2948.
-
(2007)
Bioinformatics
, vol.23
, pp. 2947-2948
-
-
Larkin, M.A.1
Blackshields, G.2
Brown, N.P.3
Chenna, R.4
McGettigan, P.A.5
McWilliam, H.6
Valentin, F.7
Wallace, I.M.8
Wilm, A.9
Lopez, R.10
Thompson, J.D.11
Gibson, T.J.12
Higgins, D.G.13
-
15
-
-
0030339738
-
AQUA and PROCHECK-NMR: Programs for checking the quality of protein structures solved by NMR
-
Laskowski RA, Rullmannn JA, MacArthur MW, Kaptein R, Thornton JM (1996). AQUA and PROCHECK-NMR: Programs for checking the quality of protein structures solved by NMR. J. Biomol. NMR, 8:477-486.
-
(1996)
J. Biomol. NMR
, vol.8
, pp. 477-486
-
-
Laskowski, R.A.1
Rullmannn, J.A.2
McArthur, M.W.3
Kaptein, R.4
Thornton, J.M.5
-
16
-
-
0015259702
-
Isolation and characterization of a bacteriophage tail-like bacteriocin from a strain of Rhizobium
-
Lotz W, Mayer F (1972). Isolation and characterization of a bacteriophage tail-like bacteriocin from a strain of Rhizobium. J. Virol. 9: 160-173.
-
(1972)
J. Virol.
, vol.9
, pp. 160-173
-
-
Lotz, W.1
Mayer, F.2
-
17
-
-
0034044314
-
The PSIPRED protein structure prediction server
-
McGuffin LJ, Bryson K, Jones DT (2000). The PSIPRED protein structure prediction server. Bioinformatics, 16: 404-405.
-
(2000)
Bioinformatics
, vol.16
, pp. 404-405
-
-
McGuffin, L.J.1
Bryson, K.2
Jones, D.T.3
-
18
-
-
79960862262
-
Role of bacteriocin like substances in rhizosphere ecology
-
In: Hafeez FY, Malik KA, Zafar Y (Eds.), NCB/NIBGE Press, Faisalabad, Pakistan
-
Naeem F, Khan SA, Kiran A, Mukhtar Z, Hafeez FY (2009). Role of bacteriocin like substances in rhizosphere ecology, In: Hafeez FY, Malik KA, Zafar Y (Eds.). Microbial technologies for sustainable agriculture: Exploring the hidden potentials of microbes. NCB/NIBGE Press, Faisalabad, Pakistan, pp. 15-18.
-
(2009)
Microbial technologies for sustainable agriculture: Exploring the hidden potentials of microbes
, pp. 15-18
-
-
Naeem, F.1
Khan, S.A.2
Kiran, A.3
Mukhtar, Z.4
Hafeez, F.Y.5
-
19
-
-
0029855822
-
Biosynthesis of bacteriocins in lactic acid bacteria
-
Nes IF, Diep DB, Havarstein LS, Brurberg MB, Eijsink V, Holo H (1996). Biosynthesis of bacteriocins in lactic acid bacteria. Antonie Van Leeuwenhoek, 70: 113-128.
-
(1996)
Antonie Van Leeuwenhoek
, vol.70
, pp. 113-128
-
-
Nes, I.F.1
Diep, D.B.2
Havarstein, L.S.3
Brurberg, M.B.4
Eijsink, V.5
Holo, H.6
-
20
-
-
0032975053
-
Cloning and characterization of a Rhizobium leguminosarum gene encoding a bacteriocin with similarities to RTX toxins
-
Oresnik IJ, Twelker S, Hynes MF (1999). Cloning and characterization of a Rhizobium leguminosarum gene encoding a bacteriocin with similarities to RTX toxins. Appl Environ Microbiol. 65: 2833-2840.
-
(1999)
Appl Environ Microbiol
, vol.65
, pp. 2833-2840
-
-
Oresnik, I.J.1
Twelker, S.2
Hynes, M.F.3
-
21
-
-
4444221565
-
UCSF Chimera--a visualization system for exploratory research and analysis
-
Pettersen EF, Goddard TD, Huang CC, Couch GS, Greenblatt DM, Meng EC, Ferrin TE (2004). UCSF Chimera--a visualization system for exploratory research and analysis. J. Comput. Chem. 25: 1605-1612.
-
(2004)
J. Comput. Chem.
, vol.25
, pp. 1605-1612
-
-
Pettersen, E.F.1
Goddard, T.D.2
Huang, C.C.3
Couch, G.S.4
Greenblatt, D.M.5
Meng, E.C.6
Ferrin, T.E.7
-
22
-
-
0032425481
-
Molecular mechanisms of bacteriocin evolution
-
Riley MA (1998). Molecular mechanisms of bacteriocin evolution. Annu. Rev. Genet. 32: 255-278.
-
(1998)
Annu. Rev. Genet.
, vol.32
, pp. 255-278
-
-
Riley, M.A.1
-
23
-
-
0036589206
-
Bacteriocin diversity: Ecological and evolutionary perspectives
-
Riley MA, Wertz JE (2002a). Bacteriocin diversity: Ecological and evolutionary perspectives. Biochimie, 84: 357-364.
-
(2002)
Biochimie
, vol.84
, pp. 357-364
-
-
Riley, M.A.1
Wertz, J.E.2
-
24
-
-
0036406590
-
Bacteriocins: Evolution, ecology, and application
-
Riley MA, Wertz JE (2002b). Bacteriocins: Evolution, ecology, and application. Annu. Rev. Microbiol. 56: 117-137.
-
(2002)
Annu. Rev. Microbiol.
, vol.56
, pp. 117-137
-
-
Riley, M.A.1
Wertz, J.E.2
-
25
-
-
77954065271
-
I-TASSER: A unified platform for automated protein structure and function prediction
-
Roy A, Kucukural A, Zhang Y (2010). I-TASSER: A unified platform for automated protein structure and function prediction. Nat. Protoc. 5: 725-738.
-
(2010)
Nat. Protoc.
, vol.5
, pp. 725-738
-
-
Roy, A.1
Kucukural, A.2
Zhang, Y.3
-
26
-
-
0031782954
-
Lantibiotics: Biosynthesis and biological activities of uniquely modified peptides from gram-positive bacteria
-
Sahl HG, Bierbaum G (1998). Lantibiotics: Biosynthesis and biological activities of uniquely modified peptides from gram-positive bacteria. Annu. Rev. Microbiol. 52: 41-79.
-
(1998)
Annu. Rev. Microbiol.
, vol.52
, pp. 41-79
-
-
Sahl, H.G.1
Bierbaum, G.2
-
27
-
-
0030071672
-
Bacteriocin small of Rhizobium leguminosarum belongs to the class of N-acyl-L-homoserine lactone molecules, known as autoinducers and as quorum sensing cotranscription factors
-
Schripsema J, de Rudder KE, van Vliet TB, Lankhorst PP, de Vroom E, Kijne JW, van Brussel AA (1996). Bacteriocin small of Rhizobium leguminosarum belongs to the class of N-acyl-L-homoserine lactone molecules, known as autoinducers and as quorum sensing cotranscription factors. J. Bacteriol. 178: 366-371.
-
(1996)
J. Bacteriol.
, vol.178
, pp. 366-371
-
-
Schripsema, J.1
de Rudder, K.E.2
van Vliet, T.B.3
Lankhorst, P.P.4
de Vroom, E.5
Kijne, J.W.6
van Brussel, A.A.7
-
28
-
-
33947518267
-
The spectrum of antimicrobial activity of the bacteriocin subtilosin A
-
Shelburne CE, An FY, Dholpe V, Ramamoorthy A, Lopatin DE, Lantz MS (2007). The spectrum of antimicrobial activity of the bacteriocin subtilosin A. J. Antimicrob. Chemother. 59: 297-300.
-
(2007)
J. Antimicrob. Chemother.
, vol.59
, pp. 297-300
-
-
Shelburne, C.E.1
An, F.Y.2
Dholpe, V.3
Ramamoorthy, A.4
Lopatin, D.E.5
Lantz, M.S.6
-
29
-
-
0026707720
-
Molecular mechanisms of attachment of Rhizobium bacteria to plant roots
-
Smit G, Swart S, Lugtenberg BJ, Kijne JW (1992). Molecular mechanisms of attachment of Rhizobium bacteria to plant roots. Mol. Microbiol. 6: 2897-2903.
-
(1992)
Mol. Microbiol.
, vol.6
, pp. 2897-2903
-
-
Smit, G.1
Swart, S.2
Lugtenberg, B.J.3
Kijne, J.W.4
-
30
-
-
0026616329
-
Genetics of competition for nodulation of legumes
-
Triplett EW, Sadowsky MJ (1992). Genetics of competition for nodulation of legumes. Annu. Rev. Microbiol. 46: 399-428.
-
(1992)
Annu. Rev. Microbiol.
, vol.46
, pp. 399-428
-
-
Triplett, E.W.1
Sadowsky, M.J.2
-
31
-
-
0021812069
-
Bacteriocin small of fast-growing rhizobia is chloroform soluble and is not required for effective nodulation
-
van Brussel AA, Zaat SA, Wijffelman CA, Pees E, Lugtenberg BJ (1985). Bacteriocin small of fast-growing rhizobia is chloroform soluble and is not required for effective nodulation. J. Bacteriol. 162: 1079-1082.
-
(1985)
J. Bacteriol.
, vol.162
, pp. 1079-1082
-
-
van Brussel, A.A.1
Zaat, S.A.2
Wijffelman, C.A.3
Pees, E.4
Lugtenberg, B.J.5
-
32
-
-
25444491937
-
Protein subcellular localization prediction for Gram-negative bacteria using amino acid subalphabets and a combination of multiple support vector machines
-
Wang J, Sung WK, Krishnan A, Li KB (2005). Protein subcellular localization prediction for Gram-negative bacteria using amino acid subalphabets and a combination of multiple support vector machines. BMC Bioinformatics, 6: p. 174.
-
(2005)
BMC Bioinformatics
, vol.6
, pp. 174
-
-
Wang, J.1
Sung, W.K.2
Krishnan, A.3
Li, K.B.4
-
33
-
-
0032619552
-
Protein identification and analysis tools in the ExPASy server
-
Wilkins MR, Gasteiger E, Bairoch A, Sanchez JC, Williams KL, Appel RD, Hochstrasser DF (1999). Protein identification and analysis tools in the ExPASy server. Methods Mol. Biol. 112: 531-552.
-
(1999)
Methods Mol. Biol.
, vol.112
, pp. 531-552
-
-
Wilkins, M.R.1
Gasteiger, E.2
Bairoch, A.3
Sanchez, J.C.4
Williams, K.L.5
Appel, R.D.6
Hochstrasser, D.F.7
-
34
-
-
46449132707
-
Specific interactions for ab initio folding of protein terminal regions with secondary structures
-
Yang Y, Zhou Y (2008). Specific interactions for ab initio folding of protein terminal regions with secondary structures. Proteins, 72: 793-803.
-
(2008)
Proteins
, vol.72
, pp. 793-803
-
-
Yang, Y.1
Zhou, Y.2
-
35
-
-
33745094990
-
The genome of Rhizobium leguminosarum, has recognizable core and accessory components
-
Young JP, Crossman LC, Johnston AW, Thomson NR, Ghazoui ZF, Hull KH, Wexler M, Curson AR, Todd JD, Poole PS, Mauchline TH, East AK, Quail MA, Churcher C, Arrowsmith C, Cherevach I, Chillingworth T, Clarke K, Cronin A, Davis P, Fraser A, Hance Z, Hauser H, Jagels K, Moule S, Mungall K, Norbertczak H, Rabbinowitsch E, Sanders M, Simmonds M, Whitehead S, Parkhill J (2006). The genome of Rhizobium leguminosarum, has recognizable core and accessory components. Genome Biol. 7: R34.
-
(2006)
Genome Biol
, vol.7
-
-
Young, J.P.1
Crossman, L.C.2
Johnston, A.W.3
Thomson, N.R.4
Ghazoui, Z.F.5
Hull, K.H.6
Wexler, M.7
Curson, A.R.8
Todd, J.D.9
Poole, P.S.10
Mauchline, T.H.11
East, A.K.12
Quail, M.A.13
Churcher, C.14
Arrowsmith, C.15
Cherevach, I.16
Chillingworth, T.17
Clarke, K.18
Cronin, A.19
Davis, P.20
Fraser, A.21
Hance, Z.22
Hauser, H.23
Jagels, K.24
Moule, S.25
Mungall, K.26
Norbertczak, H.27
Rabbinowitsch, E.28
Sanders, M.29
Simmonds, M.30
Whitehead, S.31
Parkhill, J.32
more..
-
36
-
-
77954199597
-
PSORTb 3.0: Improved protein subcellular localization prediction with refined localization subcategories and predictive capabilities for all prokaryotes
-
Yu NY, Wagner JR, Laird MR, Melli G, Rey S, Lo R, Dao P, Sahinalp SC, Ester M, Foster LJ, Brinkman FS (2010). PSORTb 3.0: Improved protein subcellular localization prediction with refined localization subcategories and predictive capabilities for all prokaryotes. Bioinformatics, 26: 1608-1615.
-
(2010)
Bioinformatics
, vol.26
, pp. 1608-1615
-
-
Yu, N.Y.1
Wagner, J.R.2
Laird, M.R.3
Melli, G.4
Rey, S.5
Lo, R.6
Dao, P.7
Sahinalp, S.C.8
Ester, M.9
Foster, L.J.10
Brinkman, F.S.11
|