ZINBA integrates local covariates with DNA-seq data to identify broad and narrow regions of enrichment, even within amplified genomic regions

Genome Biology

Volumn 12, Issue 7, 2011, Pages

  Rashid, Naim U ^a   Giresi, Paul G ^b   Ibrahim, Joseph G ^a   Sun, Wei ^a,c   Lieb, Jason D ^b  

^a IL   (United States)

^b UNIVERSITY OF NORTH CAROLINA   (United States)

^c UNIVERSITY OF NORTH CAROLINA SCHOOL OF MEDICINE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CYTOSINE; GENOMIC DNA; GUANINE; RNA POLYMERASE II;

ARTICLE; CONTROLLED STUDY; COPY NUMBER VARIATION; DNA CONTENT; DNA MICROARRAY; DNA SEQUENCE; GENE AMPLIFICATION; GENETIC ALGORITHM; GENETIC VARIABILITY; HUMAN; HUMAN CELL; SIGNAL NOISE RATIO; SIGNAL TRANSDUCTION; ZERO INFLATED NEGATIVE BINOMIAL ALGORITHM; ALGORITHM; BIOLOGICAL MODEL; COMPUTER PROGRAM; COMPUTER SIMULATION; GENOMICS; METHODOLOGY; STATISTICAL MODEL;

ALGORITHMS; COMPUTER SIMULATION; DNA COPY NUMBER VARIATIONS; GENOMICS; MODELS, GENETIC; MODELS, STATISTICAL; SEQUENCE ANALYSIS, DNA; SOFTWARE;

EID: 79960614727     PISSN: 14747596     EISSN: 1474760X     Source Type: Journal    
DOI: 10.1186/gb-2011-12-7-r67     Document Type: Article

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