메뉴 건너뛰기




Volumn 649, Issue , 2010, Pages 281-298

Using zinc finger nucleases for efficient and heritable gene disruption in Zebrafish

Author keywords

golden; no tail; non homologous end joining; reverse genetics; targeted mutagenesis; zebrafish; Zinc finger nuclease

Indexed keywords

DANIO RERIO;

EID: 79960256317     PISSN: 10643745     EISSN: None     Source Type: Book Series    
DOI: 10.1007/978-1-60761-753-2_18     Document Type: Article
Times cited : (11)

References (26)
  • 1
    • 44949155482 scopus 로고    scopus 로고
    • Heritable targeted gene disruption in zebrafish using designed zinc-finger nucleases
    • Doyon, Y., McCammon, J.M., Miller, J.C., Faraji, F., Ngo, C., Katibah, G.E., et al. (2008) Heritable targeted gene disruption in zebrafish using designed zinc-finger nucleases. Nat Biotechnol. 26, 702-708.
    • (2008) Nat Biotechnol. , vol.26 , pp. 702-708
    • Doyon, Y.1    McCammon, J.M.2    Miller, J.C.3    Faraji, F.4    Ngo, C.5    Katibah, G.E.6
  • 2
    • 44949162060 scopus 로고    scopus 로고
    • Targeted gene inactivation in zebrafish using engineered zinc-finger nucleases
    • Meng, X., Noyes, M.B., Zhu, L.J., Lawson, N.D., and Wolfe, S.A. (2008) Targeted gene inactivation in zebrafish using engineered zinc-finger nucleases. Nat Biotechnol. 26, 695-701.
    • (2008) Nat Biotechnol. , vol.26 , pp. 695-701
    • Meng, X.1    Noyes, M.B.2    Zhu, L.J.3    Lawson, N.D.4    Wolfe, S.A.5
  • 3
    • 58149392507 scopus 로고    scopus 로고
    • Emerging gene knockout technology in zebrafish: Zinc-finger nucleases
    • Amacher, S.L. (2008) Emerging gene knockout technology in zebrafish: Zinc-finger nucleases. Brief Funct Genomic Proteomic. 7, 460-464.
    • (2008) Brief Funct Genomic Proteomic. , vol.7 , pp. 460-464
    • Amacher, S.L.1
  • 4
    • 0742323536 scopus 로고    scopus 로고
    • TILLING -A highthroughput harvest for functional genomics
    • Stemple, D.L. (2004) TILLING -A highthroughput harvest for functional genomics. Nat Rev Genet. 5, 145-150.
    • (2004) Nat Rev Genet. , vol.5 , pp. 145-150
    • Stemple, D.L.1
  • 6
    • 0036021389 scopus 로고    scopus 로고
    • Targeted chromosomal cleavage and mutagenesis in Drosophila using zinc-finger nucleases
    • Bibikova, M., Golic, M., Golic, K.G., and Carroll, D. (2002) Targeted chromosomal cleavage and mutagenesis in Drosophila using zinc-finger nucleases. Genetics. 161, 1169-1175.
    • (2002) Genetics. , vol.161 , pp. 1169-1175
    • Bibikova, M.1    Golic, M.2    Golic, K.G.3    Carroll, D.4
  • 7
    • 33750804666 scopus 로고    scopus 로고
    • Induction and repair of zinc-finger nuclease-targeted doublestrand breaks in Caenorhabditis elegans somatic cells
    • Morton, J., Davis, M.W., Jorgensen, E.M., and Carroll, D. (2006) Induction and repair of zinc-finger nuclease-targeted doublestrand breaks in Caenorhabditis elegans somatic cells. Proc Natl Acad Sci USA. 103, 16370-16375.
    • (2006) Proc Natl Acad Sci USA. , vol.103 , pp. 16370-16375
    • Morton, J.1    Davis, M.W.2    Jorgensen, E.M.3    Carroll, D.4
  • 8
    • 0030032063 scopus 로고    scopus 로고
    • Hybrid restriction enzymes: Zinc finger fusions to Fok I cleavage domain
    • Kim, Y.G., Cha, J., and Chandrasegaran, S. (1996) Hybrid restriction enzymes: Zinc finger fusions to Fok I cleavage domain. Proc Natl Acad Sci USA. 93, 1156-1160.
    • (1996) Proc Natl Acad Sci USA. , vol.93 , pp. 1156-1160
    • Kim, Y.G.1    Cha, J.2    Chandrasegaran, S.3
  • 10
    • 0033556128 scopus 로고    scopus 로고
    • A detailed study of the substrate specificity of a chimeric restriction enzyme
    • Smith, J., Berg, J., and Chandrasegaran, S. (1999) A detailed study of the substrate specificity of a chimeric restriction enzyme. Nucleic Acids Res. 27, 674-681.
    • (1999) Nucleic Acids Res. , vol.27 , pp. 674-681
    • Smith, J.1    Berg, J.2    Chandrasegaran, S.3
  • 11
    • 0141757494 scopus 로고    scopus 로고
    • Regulation and mechanisms of mammalian double-strand break repair
    • Valerie, K. and Povirk, L.F. (2003) Regulation and mechanisms of mammalian double-strand break repair. Oncogene. 22, 5792-5812.
    • (2003) Oncogene. , vol.22 , pp. 5792-5812
    • Valerie, K.1    Povirk, L.F.2
  • 12
    • 47349097567 scopus 로고    scopus 로고
    • Rapid "opensource" engineering of customized zincfinger nucleases for highly efficient gene modification
    • Maeder, M.L., Thibodeau-Beganny, S., Osiak, A., Wright, D.A., Anthony, R.M., Eichtinger, M., et al. (2008) Rapid "opensource" engineering of customized zincfinger nucleases for highly efficient gene modification. Mol Cell. 31, 294-301.
    • (2008) Mol Cell. , vol.31 , pp. 294-301
    • Maeder, M.L.1    Thibodeau-Beganny, S.2    Osiak, A.3    Wright, D.A.4    Anthony, R.M.5    Eichtinger, M.6
  • 14
    • 84858216065 scopus 로고    scopus 로고
    • For resources and reagents related to ZFN design and application in zebrafish developed by the Wolfe and Lawson labs (2), we refer readers to their respective lab websites, http://lawsonlab.umassmed.edu The available resources and tools include the plasmids and bacterial selection strain for bacterial 1-hybrid selections to make ZFNs, as well as an online tool to help identify good ZFN target sites (http:// pgfe.umassmed.edu/ZFPsearch.html)
    • For resources and reagents related to ZFN design and application in zebrafish developed by the Wolfe and Lawson labs (2), we refer readers to their respective lab websites (http://labs.umassmed.edu/WolfeLab and http://lawsonlab.umassmed.edu). The available resources and tools include the plasmids and bacterial selection strain for bacterial 1-hybrid selections to make ZFNs, as well as an online tool to help identify good ZFN target sites (http:// pgfe.umassmed.edu/ZFPsearch.html).
  • 15
    • 0024505212 scopus 로고
    • Clonal origins of cells in the pigmented retina of the zebrafish eye
    • Streisinger, G., Coale, F., Taggart, C., Walker, C., and Grunwald, D.J. (1989) Clonal origins of cells in the pigmented retina of the zebrafish eye. Dev Biol. 131, 60-69.
    • (1989) Dev Biol. , vol.131 , pp. 60-69
    • Streisinger, G.1    Coale, F.2    Taggart, C.3    Walker, C.4    Grunwald, D.J.5
  • 16
    • 29144485743 scopus 로고    scopus 로고
    • SLC24A5, a putative cation exchanger, affects pigmentation in zebrafish and humans
    • Lamason, R.L., Mohideen, M.A., Mest, J.R., Wong, A.C., Norton, H.L., Aros, M.C., et al. (2005) SLC24A5, a putative cation exchanger, affects pigmentation in zebrafish and humans. Science. 310, 1782-1786.
    • (2005) Science. , vol.310 , pp. 1782-1786
    • Lamason, R.L.1    Mohideen, M.A.2    Mest, J.R.3    Wong, A.C.4    Norton, H.L.5    Aros, M.C.6
  • 17
    • 0027423420 scopus 로고
    • Induction of muscle pioneers and floor plate is distinguished by the zebrafish no tail mutation
    • Halpern, M.E., Ho, R.K., Walker, C., and Kimmel, C.B. (1993) Induction of muscle pioneers and floor plate is distinguished by the zebrafish no tail mutation. Cell. 75, 99-111.
    • (1993) Cell. , vol.75 , pp. 99-111
    • Halpern, M.E.1    Ho, R.K.2    Walker, C.3    Kimmel, C.B.4
  • 19
    • 84858224190 scopus 로고    scopus 로고
    • Agarose or Agar Troughs: Other alternatives : Http://www. springerprotocols. com/Full/doi/10.1385/1-59259-678-9:125?encCode= QkVDOjUyMTo5LTg3Ni05 NTI5NS0x&tokenString=165AlvaizdUK49gbSjNE4w==
    • Agarose or Agar Troughs: Http://zfin.org/ zf-info/zfbook/chapt5/5.1.html Other alternatives: Http://www.springerprotocols. com/Full/doi/10.1385/1-59259- 678-9: 125?encCode=QkVDOjUyMTo5LTg3Ni05 NTI5NS0x&tokenString=165AlvaizdUK49 gbSjNE4w==
  • 21
    • 41449109620 scopus 로고    scopus 로고
    • 2 zinc finger domains using a bacterial cell-based twohybrid selection
    • 2 zinc finger domains using a bacterial cell-based twohybrid selection. Method Mol Biol. 408, 317-334.
    • (2007) Method Mol Biol. , vol.408 , pp. 317-334
    • Thibodeau-Beganny, S.1    Joung, J.K.2
  • 22
    • 34447323568 scopus 로고    scopus 로고
    • Structure-based redesign of the dimerization interface reduces the toxicity of zinc-finger nucleases
    • Szczepek, M., Brondani, V., Büchel, J., Serrano, L., Segal, D.J., and Cathomen, T. (2007) Structure-based redesign of the dimerization interface reduces the toxicity of zinc-finger nucleases. Nat Biotechnol. 25, 786-793.
    • (2007) Nat Biotechnol. , vol.25 , pp. 786-793
    • Szczepek, M.1    Brondani, V.2    Büchel, J.3    Serrano, L.4    Segal, D.J.5    Cathomen, T.6
  • 23
    • 34447319080 scopus 로고    scopus 로고
    • An improved zinc-finger nuclease architecture for highly specific genome editing
    • Miller, J.C., Holmes, M.C., Wang, J., Guschin, D.Y., Lee, Y.L., Rupniewski, I., et al. (2007) An improved zinc-finger nuclease architecture for highly specific genome editing. Nat Biotechnol. 25, 778-785.
    • (2007) Nat Biotechnol. , vol.25 , pp. 778-785
    • Miller, J.C.1    Holmes, M.C.2    Wang, J.3    Guschin, D.Y.4    Lee, Y.L.5    Rupniewski, I.6
  • 24
    • 36048993980 scopus 로고    scopus 로고
    • Viral 2A peptides allow expression of multiple proteins from a single ORF in transgenic zebrafish embryos
    • Provost, E., Rhee, J., and Leach, S.D. (2007) Viral 2A peptides allow expression of multiple proteins from a single ORF in transgenic zebrafish embryos. Genesis. 45, 625-629.
    • (2007) Genesis. , vol.45 , pp. 625-629
    • Provost, E.1    Rhee, J.2    Leach, S.D.3
  • 26
    • 84861409753 scopus 로고    scopus 로고
    • Rapid mutation of endogenous zebrafish genes using zinc finger nucleases made by Oligomerized pool ENgineering (OPEN)
    • Foley, J.E., Yeh, J.R., Maeder, M.L., Reyon, D., Sander, J.D., Peterson, R.T., and Joung, J.K. (2009) Rapid mutation of endogenous zebrafish genes using zinc finger nucleases made by Oligomerized pool ENgineering (OPEN). PLoS One 4, e4348.
    • (2009) PLoS One , vol.4
    • Foley, J.E.1    Yeh, J.R.2    Maeder, M.L.3    Reyon, D.4    Sander, J.D.5    Peterson, R.T.6    Joung, J.K.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.