Algorithm engineering for optimal alignment of protein structure distance matrices

Optimization Letters

Volumn 5, Issue 3, 2011, Pages 421-433

  Wohlers, Inken ^a   Andonov, Rumen ^b   Klau, Gunnar W ^a  

^a CWI   (Netherlands)

^b UNIVERSITÉ DE RENNES 1   (France)

Author keywords

Algorithm engineering; Branch and cut; dali; Integer linear programming; Preprocessing; Protein structure distance matrix alignment

Indexed keywords

ALGORITHM ENGINEERING; BRANCH-AND-CUT; DALI; INTEGER LINEAR PROGRAMMING; PREPROCESSING; PROTEIN STRUCTURE DISTANCE MATRIX ALIGNMENT;

ALGORITHMS; ALIGNMENT; BIOINFORMATICS; COMPUTER PROGRAMMING; INTEGER PROGRAMMING; LINEAR PROGRAMMING; MATHEMATICAL MODELS; PROTEINS; STRUCTURAL OPTIMIZATION;

MATRIX ALGEBRA;

EID: 79960116362     PISSN: 18624472     EISSN: 18624480     Source Type: Journal    
DOI: 10.1007/s11590-011-0313-3     Document Type: Article

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