-
2
-
-
58249088751
-
MicroRNAs: Target recognition and regulatory functions
-
Bartel DP. MicroRNAs: target recognition and regulatory functions. Cell 2009; 136:215-33.
-
(2009)
Cell
, vol.136
, pp. 215-233
-
-
Bartel, D.P.1
-
3
-
-
0346094457
-
Prediction of Mammalian MicroRNA Targets
-
DOI 10.1016/S0092-8674(03)01018-3
-
Lewis BP, Shih I, Jones-Rhoades MW, Bartel DP, Burge CB. Prediction of Mammalian MicroRNA Targets. Cell 2003; 115:787-98. (Pubitemid 38058492)
-
(2003)
Cell
, vol.115
, Issue.7
, pp. 787-798
-
-
Lewis, B.P.1
Shih, I.-H.2
Jones-Rhoades, M.W.3
Bartel, D.P.4
Burge, C.B.5
-
5
-
-
49949116902
-
The impact of microRNAs on protein output
-
Baek D, Villen J, Shin C, Camargo FD, Gygi SP, Bartel DP. The impact of microRNAs on protein output. Nature 2008; 455:64-71.
-
(2008)
Nature
, vol.455
, pp. 64-71
-
-
Baek, D.1
Villen, J.2
Shin, C.3
Camargo, F.D.4
Gygi, S.P.5
Bartel, D.P.6
-
6
-
-
49949117302
-
Widespread changes in protein synthesis induced by microRNAs
-
Selbach M, Schwanhäusser B, Thierfelder N, Fang Z, Khanin R, Rajewsky N. Widespread changes in protein synthesis induced by microRNAs. Nature 2008; 455:58-63.
-
(2008)
Nature
, vol.455
, pp. 58-63
-
-
Selbach, M.1
Schwanhäusser, B.2
Thierfelder, N.3
Fang, Z.4
Khanin, R.5
Rajewsky, N.6
-
7
-
-
58849093262
-
Revisiting the principles of microRNA target recognition and mode of action
-
Brodersen P, Voinnet O. Revisiting the principles of microRNA target recognition and mode of action. Nature Reviews Molecular Cell Biology 2009; 10:141-8.
-
(2009)
Nature Reviews Molecular Cell Biology
, vol.10
, pp. 141-148
-
-
Brodersen, P.1
Voinnet, O.2
-
9
-
-
33748587841
-
A Pattern-Based Method for the Identification of MicroRNA Binding Sites and Their Corresponding Heteroduplexes
-
DOI 10.1016/j.cell.2006.07.031, PII S0092867406010993
-
Miranda KC, Huynh T, Tay Y, Ang YS, Tam WL, Thomson AM, et al. A pattern-based method for the identification of MicroRNA binding sites and their corresponding heteroduplexes. Cell 2006; 126:1203-17. (Pubitemid 44380294)
-
(2006)
Cell
, vol.126
, Issue.6
, pp. 1203-1217
-
-
Miranda, K.C.1
Huynh, T.2
Tay, Y.3
Ang, Y.-S.4
Tam, W.-L.5
Thomson, A.M.6
Lim, B.7
Rigoutsos, I.8
-
10
-
-
33745248430
-
microRNA target predictions in animals
-
Rajewsky N. microRNA target predictions in animals. Nature Genetics 2006; 38:8-13.
-
(2006)
Nature Genetics
, vol.38
, pp. 8-13
-
-
Rajewsky, N.1
-
11
-
-
33750318273
-
A guide through present computational approaches for the identification of mammalian microRNA targets
-
DOI 10.1038/nmeth954, PII NMETH954
-
Sethupathy P, Megraw M, Hatzigeorgiou AG. A guide through present computational approaches for the identification of mammalian microRNA targets. Nature Methods 2006; 3:881-6. (Pubitemid 44614721)
-
(2006)
Nature Methods
, vol.3
, Issue.11
, pp. 881-886
-
-
Sethupathy, P.1
Megraw, M.2
Hatzigeorgiou, A.G.3
-
12
-
-
13944282215
-
Microarray analysis shows that some microRNAs downregulate large numbers of-target mRNAs
-
DOI 10.1038/nature03315
-
Lim LP, Lau NC, Garrett-Engele P, Grimson A, Schelter JM, Castle J, et al. Microarray analysis shows that some microRNAs downregulate large numbers of target mRNAs. Nature 2005; 443:769-73. (Pubitemid 40292988)
-
(2005)
Nature
, vol.433
, Issue.7027
, pp. 769-773
-
-
Lim, L.P.1
Lau, N.C.2
Garrett-Engele, P.3
Grimson, A.4
Schelter, J.M.5
Castle, J.6
Bartel, D.P.7
Linsley, P.S.8
Johnson, J.M.9
-
13
-
-
28444469246
-
Silencing of microRNAs in vivo with 'antagomirs'
-
Krützfeldt J, Rajewsky N, Braich R, Rajeev KG, Tuschl T, Manoharan M, Stoffel M. Silencing of microRNAs in vivo with 'antagomirs'. Nature 2005; 438:685-9.
-
(2005)
Nature
, vol.438
, pp. 685-689
-
-
Krützfeldt, J.1
Rajewsky, N.2
Braich, R.3
Rajeev, K.G.4
Tuschl, T.5
Manoharan, M.6
Stoffel, M.7
-
14
-
-
40249106014
-
Antagonism of microRNA-122 in mice by systemically administered LNA-antimiR leads to up-regulation of a large set of predicted target mRNAs in the liver
-
DOI 10.1093/nar/gkm1113
-
Elmen J, Lindow M, Silahtaroglu A, Bak M, Christensen M, Lind-Thomsen A, et al. Antagonism of microRNA-122 in mice by systemically administered LNA-antimiR leads to upregulation of a large set of predicted target mRNAs in the liver. Nucleic Acids Research 2007; 36:1153-62. (Pubitemid 351330933)
-
(2008)
Nucleic Acids Research
, vol.36
, Issue.4
, pp. 1153-1162
-
-
Elmen, J.1
Lindow, M.2
Silahtaroglu, A.3
Bak, M.4
Christensen, M.5
Lind-Thomsen, A.6
Hedtjarn, M.7
Hansen, J.B.8
Hansen, H.F.9
Straarup, E.M.10
McCullagh, K.11
Kearney, P.12
Kauppinen, S.13
-
15
-
-
34147153781
-
Dysregulation of Cardiogenesis, Cardiac Conduction, and Cell Cycle in Mice Lacking miRNA-1-2
-
DOI 10.1016/j.cell.2007.03.030, PII S0092867407003984
-
Zhao Y, Ransom JF, Li A, Vedantham V, Drehle MV, Muth AN, et al. Dysregulation of cardiogenesis, cardiac conduction and cell cycle in mice lacking miRNA-1-2. Cell 2007; 129:303-17. (Pubitemid 46574975)
-
(2007)
Cell
, vol.129
, Issue.2
, pp. 303-317
-
-
Zhao, Y.1
Ransom, J.F.2
Li, A.3
Vedantham, V.4
Von, D.M.5
Muth, A.N.6
Tsuchihashi, T.7
McManus, M.T.8
Schwartz, R.J.9
Srivastava, D.10
-
16
-
-
22044458072
-
Cell biology: MicroRNA expression in zebrafish embryonic development
-
DOI 10.1126/science.1114519
-
Wienholds E, Kloosterman WP, Miska E, Alvarez- Saavedra E, Berezikov E, Bruijn ED, et al. MicroRNA Expression in Zebrafish Embryonic Development. Science 2005; 309:310-1. (Pubitemid 40967869)
-
(2005)
Science
, vol.309
, Issue.5732
, pp. 310-311
-
-
Wienholds, E.1
Kloosterman, W.P.2
Miska, E.3
Alvarez-Saavedra, E.4
Berezikov, E.5
De Bruijn, E.6
Horvitz, H.R.7
Kauppinen, S.8
Plasterk, R.H.A.9
-
17
-
-
33745813856
-
The cartilage specific microRNA-140 targets histone deacetylase 4 in mouse cells
-
DOI 10.1016/j.febslet.2006.06.080, PII S0014579306007988
-
Tuddenham L, Wheeler G, Ntounia-Fousara S, Waters J, Hajihosseini MK, Clark I, Dalmay T. The cartilage specific microRNA-140 targets histone deacetylase 4 in mouse cells. FEBS Letters 2006; 580:4214-7. (Pubitemid 44037596)
-
(2006)
FEBS Letters
, vol.580
, Issue.17
, pp. 4214-4217
-
-
Tuddenham, L.1
Wheeler, G.2
Ntounia-Fousara, S.3
Waters, J.4
Hajihosseini, M.K.5
Clark, I.6
Dalmay, T.7
-
18
-
-
57049089111
-
Experimental identification of microRNA-140 targets by silencing and overexpressing miR-140
-
Nicolas FE, Pais H, Schwach F, Lindow M, Kauppinen S, Moulton V, Dalmay T. Experimental identification of microRNA-140 targets by silencing and overexpressing miR-140. RNA 2008; 14:2513-20.
-
(2008)
RNA
, vol.14
, pp. 2513-2520
-
-
Nicolas, F.E.1
Pais, H.2
Schwach, F.3
Lindow, M.4
Kauppinen, S.5
Moulton, V.6
Dalmay, T.7
-
19
-
-
64249144494
-
A MicroRNA Imparts Robustness against Environmental Fluctuation during Development
-
Li X, Cassidy JJ, Reinke CA, Fischboeck S, Carthew RW. A MicroRNA Imparts Robustness against Environmental Fluctuation during Development. Cell 2009; 137:273-82.
-
(2009)
Cell
, vol.137
, pp. 273-282
-
-
Li, X.1
Cassidy, J.J.2
Reinke, C.A.3
Fischboeck, S.4
Carthew, R.W.5
-
20
-
-
27344456287
-
microRNA Target Predictions across Seven Drosophila Species and Comparison to Mammalian Targets
-
Grün D, Wang YL, Langenberger D, Gunsalus KC, Rajewsky N. microRNA Target Predictions across Seven Drosophila Species and Comparison to Mammalian Targets. PLoS Computational Biology 2005; 1:13.
-
(2005)
PLoS Computational Biology
, vol.1
, pp. 13
-
-
Grün, D.1
Wang, Y.L.2
Langenberger, D.3
Gunsalus, K.C.4
Rajewsky, N.5
-
21
-
-
44149110827
-
Mutation of miRNA target sequences during human evolution
-
Gardner PP, Vinther J. Mutation of miRNA target sequences during human evolution. Trends in Genetics 2008; 24:262-5.
-
(2008)
Trends in Genetics
, vol.24
, pp. 262-265
-
-
Gardner, P.P.1
Vinther, J.2
-
22
-
-
33751506452
-
BMP2 activity, although dispensable for bone formation, is required for the initiation of fracture healing
-
DOI 10.1038/ng1916, PII NG1916
-
Tsuji K, Bandyopadhyay A, Harfe BD, Cox K, Kaka S, Gerstenfeld L, et al. BMP2 activity, although dispensable for bone formation, is required for the initiation of fracture healing. Nat Genet 2006; 38:1424-9. (Pubitemid 44837565)
-
(2006)
Nature Genetics
, vol.38
, Issue.12
, pp. 1424-1429
-
-
Tsuji, K.1
Bandyopadhyay, A.2
Harfe, B.D.3
Cox, K.4
Kakar, S.5
Gerstenfeld, L.6
Einhorn, T.7
Tabin, C.J.8
Rosen, V.9
-
23
-
-
46149113433
-
Biological impact of the fibroblast growth factor family on articular cartilage and intervertebral disc homeostasis
-
Ellman MB, An HS, Muddasani P, Im HJ. Biological impact of the fibroblast growth factor family on articular cartilage and intervertebral disc homeostasis. Gene 2008; 420:82-9.
-
(2008)
Gene
, vol.420
, pp. 82-89
-
-
Ellman, M.B.1
An, H.S.2
Muddasani, P.3
Im, H.J.4
-
24
-
-
0033034858
-
BMP-6 is an autocrine stimulator of chondrocyte differentiation
-
Grimsrud CD, Romano PR, Puzas JE, D'Souza M, Reynolds PR, Rosier RN. O'Keefe RJ. BMP-6 is an autocrine stimulator of chondrocyte differentiation. Journal of Bone and Mineral Research 1999; 14:475-82. (Pubitemid 29153379)
-
(1999)
Journal of Bone and Mineral Research
, vol.14
, Issue.4
, pp. 475-482
-
-
Grimsrud, C.D.1
Romano, P.R.2
D'Souza, M.3
Puzas, J.E.4
Reynolds, P.R.5
Rosier, R.N.6
O'Keefe, R.J.7
-
25
-
-
35348964525
-
Expression profiling of metalloproteinases and their inhibitors in synovium and cartilage
-
Davidson RK, Waters JG, Kevorkian L, Darrah C, Cooper A, Donell ST, Clark IM. Expression profiling of metalloproteinases and their inhibitors in synovium and cartilage. Arthritis Research and Therapy 2006; 8:124.
-
(2006)
Arthritis Research and Therapy
, vol.8
, pp. 124
-
-
Davidson, R.K.1
Waters, J.G.2
Kevorkian, L.3
Darrah, C.4
Cooper, A.5
Donell, S.T.6
Clark, I.M.7
-
26
-
-
46249088370
-
lumi: A pipeline for processing Illumina microarray
-
DOI 10.1093/bioinformatics/btn224
-
Du P, Kibbe WA, Lin SM. lumi: a pipeline for processing Illumina microarray. Bioinformatics 2008; 24:1547-8. (Pubitemid 351911712)
-
(2008)
Bioinformatics
, vol.24
, Issue.13
, pp. 1547-1548
-
-
Du, P.1
Kibbe, W.A.2
Lin, S.M.3
-
27
-
-
0142121516
-
Exploration, normalization and summaries of high density oligonucleotide array probe level data
-
Irizarry RA, Hobbs B, Collin F, Beazer-Barclay YD, Antonellis KJ, Scherf U, Speed TP. Exploration, normalization and summaries of high density oligonucleotide array probe level data. Biostat 2003; 4:249-64.
-
(2003)
Biostat
, vol.4
, pp. 249-264
-
-
Irizarry, R.A.1
Hobbs, B.2
Collin, F.3
Beazer-Barclay, Y.D.4
Antonellis, K.J.5
Scherf, U.6
Speed, T.P.7
-
28
-
-
33847679625
-
Improved precision and accuracy for microarrays using updated probe set definitions
-
Sandberg R, Larsson O. Improved precision and accuracy for microarrays using updated probe set definitions. BMC Bioinformatics 2007; 8:48.
-
(2007)
BMC Bioinformatics
, vol.8
, pp. 48
-
-
Sandberg, R.1
Larsson, O.2
-
29
-
-
62549109118
-
Testing significance relative to a fold-change threshold is a TREAT
-
McCarthy DJ, Smyth GK. Testing significance relative to a fold-change threshold is a TREAT. Bioinformatics 2009; 25:765-71.
-
(2009)
Bioinformatics
, vol.25
, pp. 765-771
-
-
McCarthy, D.J.1
Smyth, G.K.2
|