-
1
-
-
13844313862
-
Whole-genome patterns of common DNA variation in three human populations
-
(doi:10.1126/science.1105436)
-
Hinds, D. A., Stuve, L. L., Nilsen, G. B., Halperin, E., Eskin, E., Balinger, D. G., Frazer, K. A. & Cox, D. R. 2005 Whole-genome patterns of common DNA variation in three human populations. Science 307, 1072-1079. (doi:10.1126/science.1105436)
-
(2005)
Science
, vol.307
, pp. 1072-1079
-
-
Hinds, D.A.1
Stuve, L.L.2
Nilsen, G.B.3
Halperin, E.4
Eskin, E.5
Balinger, D.G.6
Frazer, K.A.7
Cox, D.R.8
-
2
-
-
35348983887
-
A second generation human haplotype map of over 3.1 million SNPs
-
The International HapMap Consortium, (doi:10.1038/nature06258)
-
The International HapMap Consortium 2007 A second generation human haplotype map of over 3.1 million SNPs. Nature 449, 851-853. (doi:10.1038/nature06258)
-
(2007)
Nature
, vol.449
, pp. 851-853
-
-
-
3
-
-
42349112088
-
Genome-wide association studies for complex traits: Consensus, uncertainty and challenges
-
(doi:10.1038/nrg2344)
-
McCarthy, M. I., Abecasis, G. R., Cardon, L. R., Goldstein, D. B., Little, J., Ionnidis, J. P. A. & Hirschhorn, J. N. 2008 Genome-wide association studies for complex traits: consensus, uncertainty and challenges. Nat. Rev. Genet. 9, 356-369. (doi:10.1038/nrg2344)
-
(2008)
Nat. Rev. Genet
, vol.9
, pp. 356-369
-
-
McCarthy, M.I.1
Abecasis, G.R.2
Cardon, L.R.3
Goldstein, D.B.4
Little, J.5
Ionnidis, J.P.A.6
Hirschhorn, J.N.7
-
4
-
-
70350557123
-
Genetic association mapping at the crossroads: Which test and why? Overview and practical guidelines
-
(doi:10.1002/ ajmg.10042)
-
Schulze, T. G. & McMahon, F. J. 2002 Genetic association mapping at the crossroads: which test and why? Overview and practical guidelines. Am. J. Med. Genet. (Neuropsych. Genet.) 114, 1-11. (doi:10.1002/ ajmg.10042)
-
(2002)
Am. J. Med. Genet. (Neuropsych. Genet.)
, vol.114
, pp. 1-11
-
-
Schulze, T.G.1
McMahon, F.J.2
-
5
-
-
0036259687
-
Mapping and sequencing of the canine NRAMP1 gene and identification of mutations in Leishmaniasis-susceptible dogs
-
(doi:10.1128/IAI.70.6.2763-2771.2002)
-
Altet, L., Francimo, O., Solano-Gallego, L., Renier, C. & Sánchez, A. 2002 Mapping and sequencing of the canine NRAMP1 gene and identification of mutations in Leishmaniasis-susceptible dogs. Infect. Immun. 70, 2763-2771. (doi:10.1128/IAI.70.6.2763-2771.2002)
-
(2002)
Infect. Immun
, vol.70
, pp. 2763-2771
-
-
Altet, L.1
Francimo, O.2
Solano-Gallego, L.3
Renier, C.4
-
6
-
-
77954886721
-
Association analysis of susceptibility candidate region on chromosome 5q31 for tuberculosis
-
Ridruechai, C. et al. 2010 Association analysis of susceptibility candidate region on chromosome 5q31 for tuberculosis. Genes Immun. 11, 1-7.
-
(2010)
Genes Immun
, vol.11
, pp. 1-7
-
-
Ridruechai, C.1
-
7
-
-
45049084522
-
Mapping of a novel susceptibility locus suggests a role for MC3R and CTSZ in human tuberculosis
-
(doi:10.1164/rccm.200710-1554OC)
-
Cooke, G. S. et al. 2008 Mapping of a novel susceptibility locus suggests a role for MC3R and CTSZ in human tuberculosis. Am. J. Respir. Crit. Care Med. 178, 203-207. (doi:10.1164/rccm.200710-1554OC)
-
(2008)
Am. J. Respir. Crit. Care Med
, vol.178
, pp. 203-207
-
-
Cooke, G.S.1
-
8
-
-
0001677717
-
Controlling the false discovery rate: A practical and powerful approach to multiple testing
-
Benjamini, Y. & Hochberg, Y. 1995 Controlling the false discovery rate: a practical and powerful approach to multiple testing. J. R. Stat. Soc. B 57, 289-300.
-
(1995)
J. R. Stat. Soc. B
, vol.57
, pp. 289-300
-
-
Benjamini, Y.1
Hochberg, Y.2
-
9
-
-
77953121307
-
Powerful SNP-set analysis for case-control genome-wide association studies
-
(doi:10.1016/j.ajhg.2010.05.002)
-
Wu, M. C., Kraft, P., Epstein, M. P., Taylor, D. M., Chanock, S. J., Hunter, D. J. & Lin, X. 2010 Powerful SNP-set analysis for case-control genome-wide association studies. Am. J. Hum. Genet. 86, 929-942. (doi:10.1016/j.ajhg.2010.05.002)
-
(2010)
Am. J. Hum. Genet
, vol.86
, pp. 929-942
-
-
Wu, M.C.1
Kraft, P.2
Epstein, M.P.3
Taylor, D.M.4
Chanock, S.J.5
Hunter, D.J.6
Lin, X.7
-
10
-
-
33745279392
-
Evaluating and improving power in whole-genome association studies using fixed marker sets
-
(doi:10.1038/ng1816)
-
Pe'er, I., de Bakker, P. I. W., Maller, J., Yelensky, R., Altschuler, D. & Daly, M. J. 2006 Evaluating and improving power in whole-genome association studies using fixed marker sets. Nat. Genet. 38, 663-667. (doi:10.1038/ng1816)
-
(2006)
Nat. Genet
, vol.38
, pp. 663-667
-
-
Pe'er, I.1
de Bakker, P.I.W.2
Maller, J.3
Yelensky, R.4
Altschuler, D.5
Daly, M.J.6
-
11
-
-
33644830588
-
Power and sample size for testing associations of haplotypes with complex traits
-
(doi:10.1111/j.1529-8817. 2005.00215.x)
-
Schaid, D. J. 2005 Power and sample size for testing associations of haplotypes with complex traits. Ann. Hum. Genet. 70, 116-130. (doi:10.1111/j.1529-8817. 2005.00215.x)
-
(2005)
Ann. Hum. Genet
, vol.70
, pp. 116-130
-
-
Schaid, D.J.1
-
12
-
-
76649111363
-
Were genome-wide linkage studies a waste of time? Exploiting candidate regions within genome-wide association studies
-
The Diabetes Control and Complications Trial/Edidemiology of Diabetes Interventions and Complications Research Group 2010
-
Yoo, Y. J., Bull, S. B., Paterson, A. D., Waggott, D., Sun, L. The Diabetes Control and Complications Trial/Edidemiology of Diabetes Interventions and Complications Research Group 2010 Were genome-wide linkage studies a waste of time? Exploiting candidate regions within genome-wide association studies. Genet. Epidemiol. 34, 107-118.
-
Genet. Epidemiol
, vol.34
, pp. 107-118
-
-
Yoo, Y.J.1
Bull, S.B.2
Paterson, A.D.3
Waggott, D.4
Sun, L.5
-
13
-
-
33847176604
-
A genome-wide association study identifies novel risk loci for type 2 diabetes
-
(doi:10.1038/nature05616)
-
Sladek, R. et al. 2007 A genome-wide association study identifies novel risk loci for type 2 diabetes. Nature 445, 881-885. (doi:10.1038/nature05616)
-
(2007)
Nature
, vol.445
, pp. 881-885
-
-
Sladek, R.1
-
14
-
-
48349136889
-
Genome-wide association defines more than 30 distinct susceptibility loci for Crohn's disease
-
(doi:10. 1038/ng.175)
-
Barrett, J. C. et al. 2008 Genome-wide association defines more than 30 distinct susceptibility loci for Crohn's disease. Nat. Genet. 40, 955-962. (doi:10. 1038/ng.175)
-
(2008)
Nat. Genet
, vol.40
, pp. 955-962
-
-
Barrett, J.C.1
-
15
-
-
67650758025
-
Homozygosity and risk of childhood death due to invasive bacterial disease
-
(doi:10.1186/1471-2350-10-55)
-
Lyons, E. J. et al. 2009 Homozygosity and risk of childhood death due to invasive bacterial disease. BMC Med. Genet. 10, 55. (doi:10.1186/1471-2350-10-55)
-
(2009)
BMC Med. Genet
, vol.10
, pp. 55
-
-
Lyons, E.J.1
-
16
-
-
33646562162
-
Contrasting effects of heterozygosity on survival and hookworm resistance in California sealion pups
-
(doi:10.1111/j.1365-294X. 2006.02903.x)
-
Acevedo-Whitehouse, K., Spraker, T. R., Lyons, E., Melin, S. R., Gulland, F., DeLong, R. L. & Amos, W. 2006 Contrasting effects of heterozygosity on survival and hookworm resistance in California sealion pups. Mol. Ecol. 15, 1973-1982. (doi:10.1111/j.1365-294X. 2006.02903.x)
-
(2006)
Mol. Ecol
, vol.15
, pp. 1973-1982
-
-
Acevedo-Whitehouse, K.1
Spraker, T.R.2
Lyons, E.3
Melin, S.R.4
Gulland, F.5
Delong, R.L.6
Amos, W.7
-
17
-
-
67649880604
-
A new test for genotype-fitness associations reveals a single microsatellite allele that strongly predicts the nature of tuberculosis infections in wild boar
-
(doi:10.1111/j.1755-0998.2009.02560.x)
-
Amos W & Acevedo-Whitehouse, K. A. 2009 A new test for genotype-fitness associations reveals a single microsatellite allele that strongly predicts the nature of tuberculosis infections in wild boar. Mol. Ecol. Res. 9, 1102-1111. (doi:10.1111/j.1755-0998.2009.02560.x)
-
(2009)
Mol. Ecol. Res
, vol.9
, pp. 1102-1111
-
-
Amos, W.1
Acevedo-Whitehouse, K.A.2
-
18
-
-
40449100945
-
Candidate gene microsatellite variation is associated with parasitism in bighorn sheep
-
(doi:10.1098/rsbl.2007.0633)
-
Luikart, G., Pilgrim, K., Visty, J., Ezenwa, V. O. & Schwartz, M. K. 2008 Candidate gene microsatellite variation is associated with parasitism in bighorn sheep. Biol. Lett. 4, 228-231. (doi:10.1098/rsbl.2007.0633)
-
(2008)
Biol. Lett
, vol.4
, pp. 228-231
-
-
Luikart, G.1
Pilgrim, K.2
Visty, J.3
Ezenwa, V.O.4
Schwartz, M.K.5
-
19
-
-
44049083098
-
Influence of methylmalonyl- CoA mutase alleles on resistance to bovine tuberculosis in the European wild boar (Sus scrofa)
-
(doi:10.1111/j.1365-2052. 2008.01725.x)
-
Naranjo, V., Acevedo-Whitehouse, K. A., Vicente, J., Gortazar, C. & de la Fuente, J. 2008 Influence of methylmalonyl- CoA mutase alleles on resistance to bovine tuberculosis in the European wild boar (Sus scrofa). Anim. Genet. 39, 316-320. (doi:10.1111/j.1365-2052. 2008.01725.x)
-
(2008)
Anim. Genet
, vol.39
, pp. 316-320
-
-
Naranjo, V.1
Acevedo-Whitehouse, K.A.2
Vicente, J.3
Gortazar, C.4
de la Fuente, J.5
-
20
-
-
33846625221
-
Proteomic and transcriptome analyses of differential stress/inflammatory responses in mandibular lymph nodes and oropharyngeal tonsils of European wild boars infected with Mycobacterium bovis
-
(doi:10.1002/pmic.200600527)
-
Naranjo, V., Villar, M., Martín-Hernando, M. P., Vidal, D., Höfle, U., Gortazar, C., Kocan, K. M., Vázquez, J. & de la Fuente, J. 2007 Proteomic and transcriptome analyses of differential stress/inflammatory responses in mandibular lymph nodes and oropharyngeal tonsils of European wild boars infected with Mycobacterium bovis. Proteomics 7, 220-231. (doi:10.1002/pmic.200600527)
-
(2007)
Proteomics
, vol.7
, pp. 220-231
-
-
Naranjo, V.1
Villar, M.2
Martín-Hernando, M.P.3
Vidal, D.4
Höfle, U.5
Gortazar, C.6
Kocan, K.M.7
Vázquez, J.8
de la Fuente, J.9
-
21
-
-
77954962527
-
Exploring the mechanisms underlying a heterozygosity-fitness correlation for canine size in the Antarctic fur seal Arctocephalus gazella
-
(doi:10. 1093/jhered/esq046)
-
Hoffman, J. I., Forcada, J. & Amos, W. 2010 Exploring the mechanisms underlying a heterozygosity-fitness correlation for canine size in the Antarctic fur seal Arctocephalus gazella. J. Hered. 101, 539-552. (doi:10. 1093/jhered/esq046)
-
(2010)
J. Hered
, vol.101
, pp. 539-552
-
-
Hoffman, J.I.1
Forcada, J.2
Amos, W.3
-
22
-
-
77956921280
-
Bovine tuberculosis: The genetic basis of host susceptibility
-
(doi:10. 1098/rspb.2010.0830)
-
Allen, A. R., Minozzi, G., Glass, E. J., Skuce, R. A., McDowell, S. W. J., Woolliams, J. A. & Bishop, S. C. 2010 Bovine tuberculosis: the genetic basis of host susceptibility. Proc. R. Soc. B 277, 2737-2745. (doi:10. 1098/rspb.2010.0830)
-
(2010)
Proc. R. Soc. B
, vol.277
, pp. 2737-2745
-
-
Allen, A.R.1
Minozzi, G.2
Glass, E.J.3
Skuce, R.A.4
McDowell, S.W.J.5
Woolliams, J.A.6
Bishop, S.C.7
-
23
-
-
0032485353
-
Variations in the NRAMP1 gene and susceptibility to tuberculosis in West Africans
-
(doi:10. 1056/NEJM199803053381002)
-
Bellamy, R., Ruwende, C., Corrah, T., McAdam, K. P., Whittle, H. C. & Hill, A. V. 1998 Variations in the NRAMP1 gene and susceptibility to tuberculosis in West Africans. N. Engl. J. Med. 338, 640-644. (doi:10. 1056/NEJM199803053381002)
-
(1998)
N. Engl. J. Med
, vol.338
, pp. 640-644
-
-
Bellamy, R.1
Ruwende, C.2
Corrah, T.3
McAdam, K.P.4
Whittle, H.C.5
Hill, A.V.6
-
24
-
-
0036490080
-
New perspectives on bovine tuberculosis
-
(doi:10. 1053/tvjl.2002.0654)
-
Doherty, M. L. & Cassidy, J. P. 2002 New perspectives on bovine tuberculosis. Vet. J. 163, 109-110. (doi:10. 1053/tvjl.2002.0654)
-
(2002)
Vet. J
, vol.163
, pp. 109-110
-
-
Doherty, M.L.1
Cassidy, J.P.2
-
25
-
-
77954861956
-
Risk factors for herd breakdown with bovine tuberculosis in 148 cattle herds in the south west of England
-
(doi:10.1016/j.prevetmed.2010.03.009)
-
Ramírez-Villaescusa, G. F., Medley, G. F., Mason, S. & Green, L. E. 2010 Risk factors for herd breakdown with bovine tuberculosis in 148 cattle herds in the south west of England. Prevent. Vet. Med. 95, 224-230. (doi:10.1016/j.prevetmed.2010.03.009)
-
(2010)
Prevent. Vet. Med
, vol.95
, pp. 224-230
-
-
Ramírez-Villaescusa, G.F.1
Medley, G.F.2
Mason, S.3
Green, L.E.4
-
26
-
-
65549112109
-
Contact networks in a wildlife-livestock host community: Identifying high-risk individuals in the transmission of bovine TB among badgers and cattle
-
(doi:10.1371/journal.pone.0005016)
-
Bóhm, M., Hutchings, M. R. & White, P. C. L. 2009 Contact networks in a wildlife-livestock host community: identifying high-risk individuals in the transmission of bovine TB among badgers and cattle. PLoS ONE 4, e5016. (doi:10.1371/journal.pone.0005016)
-
(2009)
PLoS ONE
, vol.4
-
-
Bóhm, M.1
Hutchings, M.R.2
White, P.C.L.3
-
27
-
-
0035257236
-
Association study designs for complex diseases
-
(doi:10. 1038/35052543)
-
Cardon, L. R. & Bell, J. I. 2001 Association study designs for complex diseases. Nat. Rev. Genet. 2, 91-98. (doi:10. 1038/35052543)
-
(2001)
Nat. Rev. Genet
, vol.2
, pp. 91-98
-
-
Cardon, L.R.1
Bell, J.I.2
-
28
-
-
0034890791
-
The power of genomewide association studies of complex disease genes: Statistical limitations of indirect approaches using SNP markers
-
(doi:10.1007/ s100380170048)
-
Ohashi, J. & Tokunaga, K. 2001 The power of genomewide association studies of complex disease genes: statistical limitations of indirect approaches using SNP markers. J. Hum. Genet. 46, 478-482. (doi:10.1007/ s100380170048)
-
(2001)
J. Hum. Genet
, vol.46
, pp. 478-482
-
-
Ohashi, J.1
Tokunaga, K.2
-
29
-
-
35649020156
-
Power analysis for genome-wide association studies
-
(doi:10.1186/ 1471-2156-8-58)
-
Klein, R. J. 2007 Power analysis for genome-wide association studies. BMC Genet. 8, 58. (doi:10.1186/ 1471-2156-8-58)
-
(2007)
BMC Genet
, vol.8
, pp. 58
-
-
Klein, R.J.1
-
30
-
-
34848889315
-
Evaluation of genome-wide power of genetic association studies based on empirical data from the HapMap project
-
(doi:10.1093/hmg/ddm205)
-
Nannya, Y., Taura, K., Kurokawa, M., Chiba, S. & Ogawa, S. 2007 Evaluation of genome-wide power of genetic association studies based on empirical data from the HapMap project. Hum. Mol. Genet. 16, 2494-2505. (doi:10.1093/hmg/ddm205)
-
(2007)
Hum. Mol. Genet
, vol.16
, pp. 2494-2505
-
-
Nannya, Y.1
Taura, K.2
Kurokawa, M.3
Chiba, S.4
Ogawa, S.5
-
31
-
-
44149127481
-
PGA: Power calculation for case-control genetic association analyses
-
(doi:10.1186/1471-2156-9-36)
-
Menashe, I., Rosenberg, P. S. & Chen, B. E. 2008 PGA: power calculation for case-control genetic association analyses. BMC Genet. 9, 36. (doi:10.1186/1471-2156-9-36)
-
(2008)
BMC Genet
, vol.9
, pp. 36
-
-
Menashe, I.1
Rosenberg, P.S.2
Chen, B.E.3
-
32
-
-
33746512512
-
Principal components analysis corrects for stratification in genome-wide association studies
-
(doi:10.1038/ng1847)
-
Price, A. L., Patterson, N. J., Plenge, R. M., Wieinblatt, M. E., Shadick, N. A. & Reich, D. 2006 Principal components analysis corrects for stratification in genome-wide association studies. Nat. Genet. 38, 904-909. (doi:10.1038/ng1847)
-
(2006)
Nat. Genet
, vol.38
, pp. 904-909
-
-
Price, A.L.1
Patterson, N.J.2
Plenge, R.M.3
Wieinblatt, M.E.4
Shadick, N.A.5
Reich, D.6
-
33
-
-
77951959874
-
Power of a genome scan to detect and locate quantitative trait loci in cattle using single nucleotide polymorphisms
-
(doi:10.1111/j.1439-0388.2009.00831.x)
-
MacLeod, I. M., Hayes, B. J., Savin, K. W., Chamberlain, A. J., McPartlan, H. C. & Goddard, M. E. 2010 Power of a genome scan to detect and locate quantitative trait loci in cattle using single nucleotide polymorphisms. J. Anim. Breed. Genet. 127, 133-142. (doi:10.1111/j.1439-0388.2009.00831.x)
-
(2010)
J. Anim. Breed. Genet
, vol.127
, pp. 133-142
-
-
Macleod, I.M.1
Hayes, B.J.2
Savin, K.W.3
Chamberlain, A.J.4
McPartlan, H.C.5
Goddard, M.E.6
-
34
-
-
69949144370
-
A whole genome association analysis identifies loci associated with Mycobacterium avium subsp. paratuberculosis infection status in US holstein cattle
-
(doi:10. 1111/j.1365-2052.2009.01896.x)
-
Settles, M. et al. 2009 A whole genome association analysis identifies loci associated with Mycobacterium avium subsp. paratuberculosis infection status in US holstein cattle. Anim. Genet. 40, 655-662. (doi:10. 1111/j.1365-2052.2009.01896.x)
-
(2009)
Anim. Genet
, vol.40
, pp. 655-662
-
-
Settles, M.1
|