The complete nucleotide sequence and genome organization of Fig cryptic virus, a novel bipartite dsRNA virus infecting fig, widely distributed in the Mediterranean basin

Virus Genes

Volumn 42, Issue 3, 2011, Pages 415-421

  Elbeaino, Toufic ^a   Kubaa, Raied Abou ^a   Digiaro, Michele ^a   Minafra, Angelantonio ^b   Martelli, Giovanni P ^c  

^a ISTITUTO AGRONOMICO MEDITERRANEO   (Italy)

^b INSTITUTE FOR SUSTAINABLE PLANT PROTECTION   (Italy)

^c UNIVERSITY OF BARI   (Italy)

Author keywords

Detection; Ficus carica; Genome organization; Partitivirus; RT PCR; Sequencing

Indexed keywords

AMINO ACID DERIVATIVE; COAT PROTEIN; DOUBLE STRANDED DNA; POLYPEPTIDE; RNA DIRECTED RNA POLYMERASE; VIRUS PROTEIN; VIRUS RNA;

ALBANIA; ALGERIA; ALPHA VIRUS; AMINO ACID SEQUENCE; ARTICLE; BEET CRYPTIC VIRUS 3; CLADISTICS; CONTROLLED STUDY; FIG; FIG CRYPTIC VIRUS; GENETIC CONSERVATION; GENETIC ORGANIZATION; ITALY; LEBANON; MOLECULAR CLONING; MOLECULAR WEIGHT; NONHUMAN; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; PHYLOGENETIC TREE; PLANT VIRUS; PRIORITY JOURNAL; PROTEIN DOMAIN; PROTEIN MOTIF; RAPHANUS SATIVA CRYPTIC VIRUS 2; RNA SEQUENCE; SYRIAN ARAB REPUBLIC; TUNISIA; VIRAL PLANT DISEASE; VIRUS GENOME; VIRUS TRANSMISSION;

AMINO ACID SEQUENCE; BASE SEQUENCE; FICUS; GENOME, VIRAL; MEDITERRANEAN REGION; MOLECULAR SEQUENCE DATA; PHYLOGENY; PLANT DISEASES; RNA VIRUSES; SEQUENCE ALIGNMENT;

ALPHACRYPTOVIRUS; BEET CRYPTIC VIRUS 3; DSRNA VIRUSES; FELINE CALICIVIRUS; FICUS CARICA; FRAGARIA CHILOENSIS CRYPTIC VIRUS; PARTITIVIRUS; RAPHANUS SATIVUS CRYPTIC VIRUS 2;

EID: 79959744336     PISSN: 09208569     EISSN: 1572994X     Source Type: Journal    
DOI: 10.1007/s11262-011-0581-0     Document Type: Article

References (20)

1. G.P. Martelli, in Virus and Virus-Like Diseases of Pome and Stone Fruits, ed. by A. Hadidi, M. Barba, T. Candresse, W. Jelkmann (APS Press, St. Paul, 2010)
2. T. Elbeaino, M. Digiaro, G.P. Martelli, Arch. Virol. 154, 1719-1727 (2009)
3. T. Elbeaino, M. Digiaro, A. De Stradis, G.P. Martelli, J. Plant Pathol. 89, 119-124 (2007)
4. S.A. Ghabrial, K.W. Buck, B.I. Hillman, R.G. Milne, in Virus Taxonomy. 8th Report of the International Committee on Taxonomy of Viruses, ed. by C.M. Fauquet, M.A. Mayo, J. Maniloff, U. Desselberger, L.A. Ball (Elsevier Academic Press, San Diego, CA, USA, 2005), pp. 580-590
5. M.L. Nibert, K.M. Woods, S.J. Upton, S.A. Ghabrial, Arch. Virol. 154, 1959 (2009)
6. L. Chen, J.S. Chen, H. Zhang, S.N. Chen, Arch. Virol. 151, 2077-2083 (2006)
7. S. Sabanadzovic, N. Abou Ghanem-Sabanadzovic, J. Plant Pathol. 90, 287-293 (2008)
8. I.E. Tzanetakis, R. Price, R.R. Martin, Virus Genes 36, 267-272 (2008)
9. N.K. Salem, D.A. Golino, B.W. Falk, A. Rowhani, Arch. Virol. 153, 455-462 (2008)
10. T. Elbeaino, S. Nahdi, M. Digiaro, A. Alabdullah, G.P. Martelli, J. Plant Pathol. 91, 425-431 (2009)
11. P. Saldarelli, A. Minafra, G.P. Martelli, B. Walter, Plant Pathol. 43, 91-96 (1994)
12. X. Foissac, L. Svanella-Dumas, P. Gentit, M.J. Dulucq, T. Candresse, Acta Hortic. 550, 37-43 (2001)
13. R.H.A. Coutts, I.C. Livieratos, J. Phytopathol. 151, 525-527 (2003)
14. C. Marck, Nucl. Acids Res. 16, 1829-1836 (1988)
15. W.R. Pearson, D.J. Lipman, Proc. Natl Acad. Sci. U.S.A. 85, 2444-2448 (1988)
16. S.F. Altschul, F. Stephen, W. Gish, W. Miller, E.W. Myers, D.J. Lipman, J. Mol. Biol. 215, 403-410 (1990)
17. G. Perrière, M. Gouy, Biochimie 78, 364-369 (1996)
18. P. Chomczynski, Anal. Biochem. 201, 134-139 (1992)
19. J.A. Bruenn, Nucl. Acids Res. 21, 2667-5669 (1993)
20. J. Zhang, T.L. Madden, Genome Res. 7, 649-656 (1997)