메뉴 건너뛰기




Volumn 6, Issue 6, 2011, Pages

The first molecular phylogeny of strepsiptera (insecta) reveals an early burst of molecular evolution correlated with the transition to endoparasitism

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; CONTROLLED STUDY; DIVERSIFYING SELECTION; ENDOPARASITE; GENETIC ASSOCIATION; GENETIC LINE; GENETIC VARIABILITY; GENOTYPE PHENOTYPE CORRELATION; MOLECULAR EVOLUTION; MOLECULAR PHYLOGENY; MOLECULAR STABILITY; MORPHOLOGICAL TRAIT; NONHUMAN; NUCLEOTIDE SEQUENCE; PARASITISM; PARASITOID; STREPSIPTERA; ANIMAL; CLASSIFICATION; GENETICS; INSECT; PHYLOGENY;

EID: 79959622815     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0021206     Document Type: Article
Times cited : (47)

References (89)
  • 1
    • 66349111794 scopus 로고    scopus 로고
    • Genotype-phenotype associations: substitution models to detect evolutionary associations between phenotypic variables and genotypic evolutionary rate
    • O'Conner TD, Mundy NI, (2009) Genotype-phenotype associations: substitution models to detect evolutionary associations between phenotypic variables and genotypic evolutionary rate. Bioinformatics 25: i94-i100.
    • (2009) Bioinformatics , vol.25 , pp. 94-100
    • O'Conner, T.D.1    Mundy, N.I.2
  • 2
    • 77955657333 scopus 로고    scopus 로고
    • Watching the clock: studying variation in rates of molecular evolution between species
    • Lanfear R, Welch JJ, Bromham L, (2010) Watching the clock: studying variation in rates of molecular evolution between species. Trends Ecol Evol 25: 495-503.
    • (2010) Trends Ecol Evol , vol.25 , pp. 495-503
    • Lanfear, R.1    Welch, J.J.2    Bromham, L.3
  • 3
    • 84981661854 scopus 로고
    • Review of the order Strepsiptera
    • Kathirithamby J, (1989) Review of the order Strepsiptera. Syst Entomol 14: 41-62.
    • (1989) Syst Entomol , vol.14 , pp. 41-62
    • Kathirithamby, J.1
  • 4
    • 60549113277 scopus 로고    scopus 로고
    • Host-parasitoid associations in Strepsiptera
    • Kathirithamby J, (2009) Host-parasitoid associations in Strepsiptera. Annu Rev Entomol 54: 227-249.
    • (2009) Annu Rev Entomol , vol.54 , pp. 227-249
    • Kathirithamby, J.1
  • 5
    • 0037934545 scopus 로고    scopus 로고
    • Masquerading as self? endoparasitic Strepsiptera (Insecta) enclose themselves in host-derived epithelial bag
    • Kathirithamby J, Ross LD, Johnston JS, (2003) Masquerading as self? endoparasitic Strepsiptera (Insecta) enclose themselves in host-derived epithelial bag. P Natl Acad Sci USA 100: 7655-7659.
    • (2003) P Natl Acad Sci USA , vol.100 , pp. 7655-7659
    • Kathirithamby, J.1    Ross, L.D.2    Johnston, J.S.3
  • 6
    • 33645263708 scopus 로고    scopus 로고
    • Assessing the odd secondary structural properties of nuclear small subunit ribosomal RNA sequences (18S) of the twisted-wing parasites (Insecta: Strepsiptera)
    • Gillespie JJ, McKenna CH, Yoder MJ, Gutell RR, Johnston JS, et al. (2005) Assessing the odd secondary structural properties of nuclear small subunit ribosomal RNA sequences (18S) of the twisted-wing parasites (Insecta: Strepsiptera). Insect Mol Biol 14: 625-643.
    • (2005) Insect Mol Biol , vol.14 , pp. 625-643
    • Gillespie, J.J.1    McKenna, C.H.2    Yoder, M.J.3    Gutell, R.R.4    Johnston, J.S.5
  • 7
    • 44549083054 scopus 로고    scopus 로고
    • The evolution of Strepsiptera
    • Pohl H, Beutel RG, (2007) The evolution of Strepsiptera. Zoology 111: 318-338.
    • (2007) Zoology , vol.111 , pp. 318-338
    • Pohl, H.1    Beutel, R.G.2
  • 8
    • 74049137196 scopus 로고    scopus 로고
    • The mitochondrial genome of the 'twisted-wing parasite' Mengenilla australiensis: a comparative study
    • McMahon DP, Hayward A, Kathirithamby J, (2009) The mitochondrial genome of the 'twisted-wing parasite' Mengenilla australiensis: a comparative study. BMC Genomics 10: 603.
    • (2009) BMC Genomics , vol.10 , pp. 603
    • McMahon, D.P.1    Hayward, A.2    Kathirithamby, J.3
  • 9
    • 0035052220 scopus 로고    scopus 로고
    • Evolution and behavioural ecology of heteronomous aphelinid parasitoids
    • Hunter MS, Woolley JB, (2001) Evolution and behavioural ecology of heteronomous aphelinid parasitoids. Annu Rev Entomol 46: 251-90.
    • (2001) Annu Rev Entomol , vol.46 , pp. 251-290
    • Hunter, M.S.1    Woolley, J.B.2
  • 10
    • 79953061849 scopus 로고    scopus 로고
    • Cryptic diversity and host specificity in a parasitoid where the sexes utilize hosts from separate orders
    • Hayward A, McMahon DP, Kathirithamby J, (2011) Cryptic diversity and host specificity in a parasitoid where the sexes utilize hosts from separate orders. Mol Ecol 20: 1508-1528.
    • (2011) Mol Ecol , vol.20 , pp. 1508-1528
    • Hayward, A.1    McMahon, D.P.2    Kathirithamby, J.3
  • 14
    • 37549034651 scopus 로고    scopus 로고
    • Host specificity under molecular and experimental scrutiny
    • Poulin R, Keeney DB, (2008) Host specificity under molecular and experimental scrutiny. Trends Parasitol 24: 24-28.
    • (2008) Trends Parasitol , vol.24 , pp. 24-28
    • Poulin, R.1    Keeney, D.B.2
  • 15
    • 9644287861 scopus 로고    scopus 로고
    • Rate of molecular evolution of the seminal protein gene SEMG2 correlates with levels of female promiscuity
    • Dorus S, Evans PD, Wyckoff GJ, Choi SS, Lahn BT, (2004) Rate of molecular evolution of the seminal protein gene SEMG2 correlates with levels of female promiscuity. Nat Genet 36: 1326-1329.
    • (2004) Nat Genet , vol.36 , pp. 1326-1329
    • Dorus, S.1    Evans, P.D.2    Wyckoff, G.J.3    Choi, S.S.4    Lahn, B.T.5
  • 16
    • 34548500087 scopus 로고    scopus 로고
    • Evolution of an avian pigmentation gene correlates with a measure of sexual selection
    • Nadeau NJ, Burke T, Mundy NI, (2007) Evolution of an avian pigmentation gene correlates with a measure of sexual selection. Proc R Soc B Biol Sci 255: 37-45.
    • (2007) Proc R Soc B Biol Sci , vol.255 , pp. 37-45
    • Nadeau, N.J.1    Burke, T.2    Mundy, N.I.3
  • 17
    • 38349134018 scopus 로고    scopus 로고
    • Sexual selection and the adaptive evolution of mammalian ejaculate proteins
    • Ramm SA, Oliver PL, Ponting CP, Stockley P, Emes RD, (2008) Sexual selection and the adaptive evolution of mammalian ejaculate proteins. Mol Biol Evol 25: 207-219.
    • (2008) Mol Biol Evol , vol.25 , pp. 207-219
    • Ramm, S.A.1    Oliver, P.L.2    Ponting, C.P.3    Stockley, P.4    Emes, R.D.5
  • 18
    • 70349678556 scopus 로고    scopus 로고
    • Inferring speciation modes in a clade of Iberian chafers from rates of morphological evolution in different character systems
    • Ahrens D, Ribera I, (2009) Inferring speciation modes in a clade of Iberian chafers from rates of morphological evolution in different character systems. BMC Evol Biol 9: 234.
    • (2009) BMC Evol Biol , vol.9 , pp. 234
    • Ahrens, D.1    Ribera, I.2
  • 19
    • 77955379195 scopus 로고    scopus 로고
    • Morphometric relationship, phylogenetic correlation, and character evolution in the species-rich genus Aphis (Hemiptera: Aphididae)
    • Kim H, Lee W, Lee S, (2010) Morphometric relationship, phylogenetic correlation, and character evolution in the species-rich genus Aphis (Hemiptera: Aphididae). PLoS ONE 5: e11608.
    • (2010) PLoS ONE , vol.5
    • Kim, H.1    Lee, W.2    Lee, S.3
  • 20
    • 47749096417 scopus 로고    scopus 로고
    • The relative importance of body size and paleoclimatic change as explanatory variables influencing lineage diversification rate: an evolutionary analysis of bullhead catfishes (Siluriformes: Ictaluridae)
    • Hardman M, Hardman LM, (2008) The relative importance of body size and paleoclimatic change as explanatory variables influencing lineage diversification rate: an evolutionary analysis of bullhead catfishes (Siluriformes: Ictaluridae). Syst Biol 57: 116-130.
    • (2008) Syst Biol , vol.57 , pp. 116-130
    • Hardman, M.1    Hardman, L.M.2
  • 21
    • 0030728580 scopus 로고    scopus 로고
    • Correlated rates of molecular and morphological evolution
    • Omland KE, (1997) Correlated rates of molecular and morphological evolution. Evolution 51: 1381-1393.
    • (1997) Evolution , vol.51 , pp. 1381-1393
    • Omland, K.E.1
  • 22
    • 0036808040 scopus 로고    scopus 로고
    • Testing the relationship between morphological and molecular rates of change along phylogenies
    • Bromham L, Woolfit M, Lee MSY, Rambaut A, (2002) Testing the relationship between morphological and molecular rates of change along phylogenies. Evolution 56: 1921-1930.
    • (2002) Evolution , vol.56 , pp. 1921-1930
    • Bromham, L.1    Woolfit, M.2    Lee, M.S.Y.3    Rambaut, A.4
  • 23
    • 47749121116 scopus 로고    scopus 로고
    • The limitations of ancestral state reconstruction and the evolution of the Ascus in the Lecanorales (lichenized Ascomycota)
    • Ekman S, Andersen HL, Wedin M, (2007) The limitations of ancestral state reconstruction and the evolution of the Ascus in the Lecanorales (lichenized Ascomycota). Syst Biol 57: 141-156.
    • (2007) Syst Biol , vol.57 , pp. 141-156
    • Ekman, S.1    Andersen, H.L.2    Wedin, M.3
  • 24
    • 0031084115 scopus 로고    scopus 로고
    • The Strepsiptera problem: phylogeny of the holometabolous insect orders inferred from 18S and 28S ribosomal DNA sequences and morphology
    • Whiting MF, Carpenter JC, Wheeler QD, Wheeler WC, (1997) The Strepsiptera problem: phylogeny of the holometabolous insect orders inferred from 18S and 28S ribosomal DNA sequences and morphology. Syst Biol 46: 1-68.
    • (1997) Syst Biol , vol.46 , pp. 1-68
    • Whiting, M.F.1    Carpenter, J.C.2    Wheeler, Q.D.3    Wheeler, W.C.4
  • 25
    • 0032148641 scopus 로고    scopus 로고
    • Systematic bias in phylogenetic analysis: is the Strepsiptera problem solved?
    • Huelsenbeck JP, (1998) Systematic bias in phylogenetic analysis: is the Strepsiptera problem solved? Syst Biol 47: 519-537.
    • (1998) Syst Biol , vol.47 , pp. 519-537
    • Huelsenbeck, J.P.1
  • 26
    • 0001513726 scopus 로고    scopus 로고
    • A Bayesian perspective of the Strepsiptera problem
    • Huelsenbeck JP, (2001) A Bayesian perspective of the Strepsiptera problem. Tidjschr Ent 144: 165-178.
    • (2001) Tidjschr Ent , vol.144 , pp. 165-178
    • Huelsenbeck, J.P.1
  • 28
    • 77953129754 scopus 로고    scopus 로고
    • Ribosomal protein genes of holometabolous insects reject the Halteria, instead revealing a close affinity of Strepsiptera with Coloeptera
    • Longhorn SJ, Pohl H, Vogler AP, (2010) Ribosomal protein genes of holometabolous insects reject the Halteria, instead revealing a close affinity of Strepsiptera with Coloeptera. Mol Phylogenet Evol 55: 846-859.
    • (2010) Mol Phylogenet Evol , vol.55 , pp. 846-859
    • Longhorn, S.J.1    Pohl, H.2    Vogler, A.P.3
  • 29
    • 77955624876 scopus 로고    scopus 로고
    • 9-genes reinforce the phylogeny of Holometabola and yield alternative views on the phylogenetic placement of Strepsiptera
    • Mckenna DD, Farrell BD, (2010) 9-genes reinforce the phylogeny of Holometabola and yield alternative views on the phylogenetic placement of Strepsiptera. PLoS ONE 5: e11887.
    • (2010) PLoS ONE , vol.5
    • Mckenna, D.D.1    Farrell, B.D.2
  • 30
    • 79951580071 scopus 로고    scopus 로고
    • Phylogenetic relationships among insect orders based on three nuclear protein-coding gene sequences
    • (doi:10.1016/j.ympev.2010.11.001)
    • Ishiwata K, Saski G, Owaga J, Miyata T, Su ZH, (2010) Phylogenetic relationships among insect orders based on three nuclear protein-coding gene sequences. Mol Phylogenet Evol (doi:10.1016/j.ympev.2010.11.001).
    • (2010) Mol Phylogenet Evol
    • Ishiwata, K.1    Saski, G.2    Owaga, J.3    Miyata, T.4    Su, Z.H.5
  • 31
    • 67649130520 scopus 로고    scopus 로고
    • Why do species vary in their rate of molecular evolution?
    • Bromham L, (2009) Why do species vary in their rate of molecular evolution? Biol Lett 5: 401-404.
    • (2009) Biol Lett , vol.5 , pp. 401-404
    • Bromham, L.1
  • 32
    • 0029619002 scopus 로고
    • Increased genetic diversity in mitochondrial genes is correlated with the evolution of parasitism in the Hymenoptera
    • Dowton M, Austin AD, (1995) Increased genetic diversity in mitochondrial genes is correlated with the evolution of parasitism in the Hymenoptera. J Mol Evol 41: 958-965.
    • (1995) J Mol Evol , vol.41 , pp. 958-965
    • Dowton, M.1    Austin, A.D.2
  • 33
    • 0031453138 scopus 로고    scopus 로고
    • Characterization of mitochondrial small-subunit ribosomal RNAs from holoparasitic plants
    • Duff RJ, Nickrent DL, (1997) Characterization of mitochondrial small-subunit ribosomal RNAs from holoparasitic plants. J Mol Evol 45: 631-639.
    • (1997) J Mol Evol , vol.45 , pp. 631-639
    • Duff, R.J.1    Nickrent, D.L.2
  • 34
    • 33645888060 scopus 로고    scopus 로고
    • The phylogeny of Strepsiptera (Hexapoda)
    • Pohl H, Beutel RG, (2005) The phylogeny of Strepsiptera (Hexapoda). Cladistics 21: 328-374.
    • (2005) Cladistics , vol.21 , pp. 328-374
    • Pohl, H.1    Beutel, R.G.2
  • 35
    • 0028303111 scopus 로고
    • Rapid morphological radiation and convergence among races of the butterfly Heliconius erato inferred from patterns of mitochondrial DNA evolution
    • Brower AVZ, (1994) Rapid morphological radiation and convergence among races of the butterfly Heliconius erato inferred from patterns of mitochondrial DNA evolution. P Natl Acad Sci USA 91: 6491-6495.
    • (1994) P Natl Acad Sci USA , vol.91 , pp. 6491-6495
    • Brower, A.V.Z.1
  • 36
    • 0035729731 scopus 로고    scopus 로고
    • Evolutionary assembly of the milkweed fauna: cytochrome oxidase I and the age of Tetraopes beetles
    • Farrell BD, (2001) Evolutionary assembly of the milkweed fauna: cytochrome oxidase I and the age of Tetraopes beetles. Mol Phylogenet Evol 18: 46-478.
    • (2001) Mol Phylogenet Evol , vol.18 , pp. 46-478
    • Farrell, B.D.1
  • 38
    • 34547907766 scopus 로고    scopus 로고
    • Evolutionary diversification of clades of squamate reptiles
    • Ricklefs RE, Losos JB, Townsend TM, (2007) Evolutionary diversification of clades of squamate reptiles. J Evol Biol 20: 1751-1762.
    • (2007) J Evol Biol , vol.20 , pp. 1751-1762
    • Ricklefs, R.E.1    Losos, J.B.2    Townsend, T.M.3
  • 39
    • 0000915066 scopus 로고
    • Studi sugli 'Strepsiptera' Insecta. III. Descrizione e biologia di 6 specie italiane di Mengenilla
    • Silvestri F, (1943) Studi sugli 'Strepsiptera' Insecta. III. Descrizione e biologia di 6 specie italiane di Mengenilla. Boll Lab Zool Gen Agric Portici 32: 197-282.
    • (1943) Boll Lab Zool Gen Agric Portici , vol.32 , pp. 197-282
    • Silvestri, F.1
  • 40
    • 1342343037 scopus 로고    scopus 로고
    • Fine structure of adhesive devices of Strepsiptera (Insecta)
    • Pohl H, Beutel RG, (2004) Fine structure of adhesive devices of Strepsiptera (Insecta). Arthropod Struct Dev 33: 31-43.
    • (2004) Arthropod Struct Dev , vol.33 , pp. 31-43
    • Pohl, H.1    Beutel, R.G.2
  • 41
    • 34347373517 scopus 로고    scopus 로고
    • Correlates of diversification in the plant clade Dipsacales: geographic movement and evolutionary innovation
    • Moore BR, Donoghue MJ, (2007) Correlates of diversification in the plant clade Dipsacales: geographic movement and evolutionary innovation. Am Nat 170: S28-S55.
    • (2007) Am Nat , vol.170 , pp. 28-55
    • Moore, B.R.1    Donoghue, M.J.2
  • 42
    • 75149189785 scopus 로고    scopus 로고
    • Phylogenies reveal new interpretation of speciation and the red queen
    • Venditti C, Meade A, Pagel M, (2009) Phylogenies reveal new interpretation of speciation and the red queen. Nature 463: 349-352.
    • (2009) Nature , vol.463 , pp. 349-352
    • Venditti, C.1    Meade, A.2    Pagel, M.3
  • 43
    • 41949132520 scopus 로고    scopus 로고
    • Correlates of substitution rate variation in mammalian protein-coding sequences
    • Welch JJ, Bininda-Emonds ORP, Bromham L, (2008) Correlates of substitution rate variation in mammalian protein-coding sequences. BMC Evol Biol 8: 53.
    • (2008) BMC Evol Biol , vol.8 , pp. 53
    • Welch, J.J.1    Bininda-Emonds, O.R.P.2    Bromham, L.3
  • 44
    • 43749085321 scopus 로고    scopus 로고
    • Parasite immune evasion: a momentous molecular war
    • Schmid-Hempel P, (2008) Parasite immune evasion: a momentous molecular war. Trends Ecol Evol 23: 318-26.
    • (2008) Trends Ecol Evol , vol.23 , pp. 318-326
    • Schmid-Hempel, P.1
  • 45
    • 20144362109 scopus 로고    scopus 로고
    • Molecular dating when rates vary
    • Welch JJ, Bromham L, (2005) Molecular dating when rates vary. Trends Ecol Evol 20: 320-327.
    • (2005) Trends Ecol Evol , vol.20 , pp. 320-327
    • Welch, J.J.1    Bromham, L.2
  • 46
    • 67649133122 scopus 로고    scopus 로고
    • An examination of phylogenetic models of substitution rate variation among lineages
    • Ho SYW, (2009) An examination of phylogenetic models of substitution rate variation among lineages. Biol Lett 5: 421-424.
    • (2009) Biol Lett , vol.5 , pp. 421-424
    • Ho, S.Y.W.1
  • 47
    • 0000698003 scopus 로고
    • The phylogeny of Coleoptera
    • Crowson RA, (1960) The phylogeny of Coleoptera. Ann Rev Entomol 5: 111-134.
    • (1960) Ann Rev Entomol , vol.5 , pp. 111-134
    • Crowson, R.A.1
  • 48
    • 2442691520 scopus 로고    scopus 로고
    • A Bayesian mixture model for across-site heterogeneities in the amino acid replacement process
    • Lartillot N, Philippe H, (2004) A Bayesian mixture model for across-site heterogeneities in the amino acid replacement process. Mol Biol Evol 21: 1095-109.
    • (2004) Mol Biol Evol , vol.21 , pp. 1095-1109
    • Lartillot, N.1    Philippe, H.2
  • 49
    • 70350439632 scopus 로고    scopus 로고
    • Bahiaxenidae, a "living fossil" and a new family of Strepsiptera (Hexapoda) discovered in Brazil
    • Bravo F, Pohl H, Silvo-Neto A, Beutel RG, (2009) Bahiaxenidae, a "living fossil" and a new family of Strepsiptera (Hexapoda) discovered in Brazil. Cladistics 25: 1-10.
    • (2009) Cladistics , vol.25 , pp. 1-10
    • Bravo, F.1    Pohl, H.2    Silvo-Neto, A.3    Beutel, R.G.4
  • 50
    • 15944409594 scopus 로고    scopus 로고
    • The position of the Hymenoptera within the Holometabola as inferred from the mitochondrial genome of Perga condei (Hymenoptera: Symphyta: Pergidae)
    • Castro LR, Dowton M, (2005) The position of the Hymenoptera within the Holometabola as inferred from the mitochondrial genome of Perga condei (Hymenoptera: Symphyta: Pergidae). Mol Phylogenet Evol 34: 469-479.
    • (2005) Mol Phylogenet Evol , vol.34 , pp. 469-479
    • Castro, L.R.1    Dowton, M.2
  • 51
    • 33845789114 scopus 로고    scopus 로고
    • Mitochondrial genomes in the Hymenoptera and their utility as phylogenetic markers
    • Castro LR, Dowton M, (2006) Mitochondrial genomes in the Hymenoptera and their utility as phylogenetic markers. Syst Entomol 32: 60-69.
    • (2006) Syst Entomol , vol.32 , pp. 60-69
    • Castro, L.R.1    Dowton, M.2
  • 52
    • 0002051540 scopus 로고    scopus 로고
    • BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT
    • Hall TA, (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucl Acids Symp Ser 41: 95-98.
    • (1999) Nucl Acids Symp Ser , vol.41 , pp. 95-98
    • Hall, T.A.1
  • 53
    • 0028345871 scopus 로고
    • Mosquito large subunit ribosomal RNA: simultaneous alignment of primary and secondary structure
    • Kjer KM, Baldridge GD, Fallon AM, (1994) Mosquito large subunit ribosomal RNA: simultaneous alignment of primary and secondary structure. Biochim Biophys Acta 1217: 147-155.
    • (1994) Biochim Biophys Acta , vol.1217 , pp. 147-155
    • Kjer, K.M.1    Baldridge, G.D.2    Fallon, A.M.3
  • 54
    • 7444256051 scopus 로고    scopus 로고
    • Characterizing regions of ambiguous alignment caused by the expansion and contraction of hairpin-stem loops in ribosomal RNA molecules
    • Gillespie JJ, (2004) Characterizing regions of ambiguous alignment caused by the expansion and contraction of hairpin-stem loops in ribosomal RNA molecules. Mol Phylogenet Evol 33: 936-943.
    • (2004) Mol Phylogenet Evol , vol.33 , pp. 936-943
    • Gillespie, J.J.1
  • 55
    • 0042121256 scopus 로고    scopus 로고
    • Mfold web server for nucleic acid folding and hybridization prediction
    • Zuker M, (2003) Mfold web server for nucleic acid folding and hybridization prediction. Nucleic Acids Res 31: 3406-3415.
    • (2003) Nucleic Acids Res , vol.31 , pp. 3406-3415
    • Zuker, M.1
  • 56
    • 3042666256 scopus 로고    scopus 로고
    • MUSCLE: multiple sequence alignment with high accuracy and high throughput
    • Edgar RC, (2004) MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res 32: 1792-1797.
    • (2004) Nucleic Acids Res , vol.32 , pp. 1792-1797
    • Edgar, R.C.1
  • 57
    • 34547489084 scopus 로고    scopus 로고
    • Improvement of phylogenies after removing divergent ambiguously aligned blocks from protein sequence alignments
    • Talavera G, Castresana J, (2007) Improvement of phylogenies after removing divergent ambiguously aligned blocks from protein sequence alignments. Syst Biol 56: 564-577.
    • (2007) Syst Biol , vol.56 , pp. 564-577
    • Talavera, G.1    Castresana, J.2
  • 58
    • 0034849408 scopus 로고    scopus 로고
    • MrBayes: Bayesian inference of phylogeny
    • Huelsenbeck J, Ronquist F, (2001) MrBayes: Bayesian inference of phylogeny. Bioinformatics 17: 754-755.
    • (2001) Bioinformatics , vol.17 , pp. 754-755
    • Huelsenbeck, J.1    Ronquist, F.2
  • 59
    • 0041386108 scopus 로고    scopus 로고
    • MrBayes 3, Bayesian phylogenetic inference under mixed models
    • Ronquist F, Huelsenbeck JP, (2003) MrBayes 3, Bayesian phylogenetic inference under mixed models. Bioinformatics 19: 1572-1574.
    • (2003) Bioinformatics , vol.19 , pp. 1572-1574
    • Ronquist, F.1    Huelsenbeck, J.P.2
  • 60
    • 22944456598 scopus 로고    scopus 로고
    • MrModeltest v2
    • Program distributed by the author. Evolutionary Biology Centre, Uppsala University
    • Nylander JAA, (2004) MrModeltest v2. Program distributed by the author. Evolutionary Biology Centre, Uppsala University.
    • (2004)
    • Nylander, J.A.A.1
  • 61
    • 0034894278 scopus 로고    scopus 로고
    • PAL: An object-oriented programming library for molecular evolution and phylogenetics
    • Drummond A, Strimmer K, (2001) PAL: An object-oriented programming library for molecular evolution and phylogenetics. Bioinformatics 17: 662-663.
    • (2001) Bioinformatics , vol.17 , pp. 662-663
    • Drummond, A.1    Strimmer, K.2
  • 62
    • 0242578620 scopus 로고    scopus 로고
    • A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
    • Guindon S, Gascuel O, (2003) A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst Biol 52: 696-704.
    • (2003) Syst Biol , vol.52 , pp. 696-704
    • Guindon, S.1    Gascuel, O.2
  • 63
    • 18744382506 scopus 로고    scopus 로고
    • ProtTest: selection of best-fit models of protein evolution
    • Abascal F, Zardoya R, Posada D, (2005) ProtTest: selection of best-fit models of protein evolution. Bioinformatics 21: 2104-2105.
    • (2005) Bioinformatics , vol.21 , pp. 2104-2105
    • Abascal, F.1    Zardoya, R.2    Posada, D.3
  • 64
    • 33750403801 scopus 로고    scopus 로고
    • RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
    • Stomatakis A, (2006) RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22: 2688-2690.
    • (2006) Bioinformatics , vol.22 , pp. 2688-2690
    • Stomatakis, A.1
  • 65
    • 0034848170 scopus 로고    scopus 로고
    • DAMBE: data analysis in molecular biology and evolution
    • Xia X, Xie Z, (2001) DAMBE: data analysis in molecular biology and evolution. J Heredity 92: 371-373.
    • (2001) J Heredity , vol.92 , pp. 371-373
    • Xia, X.1    Xie, Z.2
  • 67
    • 0031002417 scopus 로고    scopus 로고
    • Likelihood-mapping: a simple method to visualize phylogenetic content of a sequence alignment
    • Strimmer K, von Haeseler A, (1997) Likelihood-mapping: a simple method to visualize phylogenetic content of a sequence alignment. Proc Natl Acad Sci USA 94: 6815-6819.
    • (1997) Proc Natl Acad Sci USA , vol.94 , pp. 6815-6819
    • Strimmer, K.1    von Haeseler, A.2
  • 68
    • 0036205377 scopus 로고    scopus 로고
    • TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing
    • Schmidt HA, Strimmer K, Vingron M, von Haeseler A, (2002) TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing. Bioinformatics 18: 502-504.
    • (2002) Bioinformatics , vol.18 , pp. 502-504
    • Schmidt, H.A.1    Strimmer, K.2    Vingron, M.3    von Haeseler, A.4
  • 69
    • 0029974748 scopus 로고    scopus 로고
    • Model of amino acid substitution in proteins encoded by mitochondrial DNA
    • Adachi J, Hasegawa M, (1996) Model of amino acid substitution in proteins encoded by mitochondrial DNA. J Mol Evol 42: 459-468.
    • (1996) J Mol Evol , vol.42 , pp. 459-468
    • Adachi, J.1    Hasegawa, M.2
  • 70
    • 33845904407 scopus 로고    scopus 로고
    • MtArt: A new model of amino acid replacement for Arthropoda
    • Abascal F, Posada D, Zardoya R, (2007) MtArt: A new model of amino acid replacement for Arthropoda. Mol Biol Evol 24: 1-5.
    • (2007) Mol Biol Evol , vol.24 , pp. 1-5
    • Abascal, F.1    Posada, D.2    Zardoya, R.3
  • 71
    • 45849154166 scopus 로고    scopus 로고
    • LG: an improved, general amino-acid replacement matrix
    • Le SQ, Gascuel O, (2008) LG: an improved, general amino-acid replacement matrix. Mol Biol Evol 25: 1307-20.
    • (2008) Mol Biol Evol , vol.25 , pp. 1307-1320
    • Le, S.Q.1    Gascuel, O.2
  • 72
    • 79959591400 scopus 로고    scopus 로고
    • Tracer v1.4, Available from
    • Rambaut A, Drummond AJ, (2007) Tracer v1.4, Available fromhttp://beast.bio.ed.ac.uk/Tracer.
    • (2007)
    • Rambaut, A.1    Drummond, A.J.2
  • 73
    • 33750403801 scopus 로고    scopus 로고
    • RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
    • Stomatakis A, (2006) RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22: 2688-2690.
    • (2006) Bioinformatics , vol.22 , pp. 2688-2690
    • Stomatakis, A.1
  • 74
    • 79959624043 scopus 로고    scopus 로고
    • (2007)
    • Rambaut A, Drummond AJ, (2007) (2007) FigTree v1.0, Available from http://tree.bio.ed.ac.uk/FigTree.
    • (2007)
    • Rambaut, A.1    Drummond, A.J.2
  • 75
    • 38649110663 scopus 로고    scopus 로고
    • BEAST: Bayesian evolutionary analysis by sampling trees
    • Drummond AJ, Rambaut A, (2007) BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evol Biol 7: 214.
    • (2007) BMC Evol Biol , vol.7 , pp. 214
    • Drummond, A.J.1    Rambaut, A.2
  • 76
    • 34547803197 scopus 로고    scopus 로고
    • PAML 4, a program package for phylogenetic analysis by maximum likelihood
    • Yang Z, (2007) PAML 4, a program package for phylogenetic analysis by maximum likelihood. Mol Biol Evol 24: 1586-1591.
    • (2007) Mol Biol Evol , vol.24 , pp. 1586-1591
    • Yang, Z.1
  • 78
    • 28944450584 scopus 로고    scopus 로고
    • Choosing appropriate substitution models for the phylogenetic analysis of protein-coding sequences
    • Shapiro B, Rambaut A, Drummond AJ, (2006) Choosing appropriate substitution models for the phylogenetic analysis of protein-coding sequences. Mol Biol Evol 23: 7-9.
    • (2006) Mol Biol Evol , vol.23 , pp. 7-9
    • Shapiro, B.1    Rambaut, A.2    Drummond, A.J.3
  • 79
    • 0034129663 scopus 로고    scopus 로고
    • RRTree: Relative-rate tests between groups of sequences on a phylogenetic tree
    • Robinson-Rechavi M, Huchon D, (2000) RRTree: Relative-rate tests between groups of sequences on a phylogenetic tree. Bioinformatics 16: 296-297.
    • (2000) Bioinformatics , vol.16 , pp. 296-297
    • Robinson-Rechavi, M.1    Huchon, D.2
  • 80
    • 0002333151 scopus 로고    scopus 로고
    • Temporal changes in biodiversity: detecting patterns and identifying causes
    • In: Gaston KJ, editors, Oxford, Blackwell Science
    • Nee S, Barraclough TG, Harvey PH, (1996) Temporal changes in biodiversity: detecting patterns and identifying causes. In: Gaston KJ, editors. Biodiversity: a biology of numbers and differences Oxford Blackwell Science pp. 230-252.
    • (1996) Biodiversity: A Biology of Numbers and Differences , pp. 230-252
    • Nee, S.1    Barraclough, T.G.2    Harvey, P.H.3
  • 81
    • 0030950324 scopus 로고    scopus 로고
    • End-Epi: an application for inferring phylogenies and population dynamic processes from molecular sequences
    • Rambaut A, Harvey PH, Nee S, (1997) End-Epi: an application for inferring phylogenies and population dynamic processes from molecular sequences. Comput Appl Biosci 13: 303-306.
    • (1997) Comput Appl Biosci , vol.13 , pp. 303-306
    • Rambaut, A.1    Harvey, P.H.2    Nee, S.3
  • 82
    • 33748559495 scopus 로고    scopus 로고
    • Likelihood methods for inferring temporal shifts in diversification rates
    • Rabosky DL, (2006) Likelihood methods for inferring temporal shifts in diversification rates. Evolution 60: 1152-1164.
    • (2006) Evolution , vol.60 , pp. 1152-1164
    • Rabosky, D.L.1
  • 83
    • 17444376463 scopus 로고    scopus 로고
    • SYMMETREE: whole-tree analysis of differential diversification rates
    • Chan KM, Moore BR, (2005) SYMMETREE: whole-tree analysis of differential diversification rates. Bioinformatics 21: 1709-1710.
    • (2005) Bioinformatics , vol.21 , pp. 1709-1710
    • Chan, K.M.1    Moore, B.R.2
  • 84
    • 9744245452 scopus 로고    scopus 로고
    • Bayesian estimation of ancestral character states on phylogenies
    • Pagel M, Meade A, Barker D, (2004) Bayesian estimation of ancestral character states on phylogenies. Syst Biol 53: 673-684.
    • (2004) Syst Biol , vol.53 , pp. 673-684
    • Pagel, M.1    Meade, A.2    Barker, D.3
  • 85
    • 77954434664 scopus 로고    scopus 로고
    • Conspecifics of a heterotrophic heteronomous species of Strepsiptera (Insecta) are matched by molecular characterization
    • Kathirithamby J, Hayward A, McMahon DP, Ferreira RS, Andreazze R, et al. (2010) Conspecifics of a heterotrophic heteronomous species of Strepsiptera (Insecta) are matched by molecular characterization. Syst Entomol 35: 234-242.
    • (2010) Syst Entomol , vol.35 , pp. 234-242
    • Kathirithamby, J.1    Hayward, A.2    McMahon, D.P.3    Ferreira, R.S.4    Andreazze, R.5
  • 86
    • 0001305209 scopus 로고    scopus 로고
    • First record of a female stylopid (Strepsiptera:? Myrecolacidae) parasite of prionomyrmecine ant (Hymenoptera: Formicidae) in Baltic amber
    • Pohl H, Kinzelbach KJ, (2001) First record of a female stylopid (Strepsiptera:? Myrecolacidae) parasite of prionomyrmecine ant (Hymenoptera: Formicidae) in Baltic amber. Insect Syst Evol 32: 143-146.
    • (2001) Insect Syst Evol , vol.32 , pp. 143-146
    • Pohl, H.1    Kinzelbach, K.J.2
  • 87
    • 3042649996 scopus 로고    scopus 로고
    • Mesquite, a modular system for evolutionary analysis
    • Available at: Version 1.12
    • Maddison WP, Maddison DR, (2006) Mesquite, a modular system for evolutionary analysis, Version 1.12. Available at:http://mesquiteproject.org.
    • (2006)
    • Maddison, W.P.1    Maddison, D.R.2
  • 88
    • 0000122573 scopus 로고
    • PHYLIP-phylogeny inference package
    • (version 3.2)
    • Felsenstein J, (1989) PHYLIP-phylogeny inference package (version 3.2). Cladistics 5: 164-166.
    • (1989) Cladistics , vol.5 , pp. 164-166
    • Felsenstein, J.1
  • 89
    • 36448956752 scopus 로고    scopus 로고
    • The K tree score: quantification of differences in the relative branch length and topology of phylogenetic trees
    • Soria-Carrasco V, Talavera G, Idea J, Castresana J, (2007) The K tree score: quantification of differences in the relative branch length and topology of phylogenetic trees. Bioinformatics 23: 2954-2956.
    • (2007) Bioinformatics , vol.23 , pp. 2954-2956
    • Soria-Carrasco, V.1    Talavera, G.2    Idea, J.3    Castresana, J.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.