-
1
-
-
0027092323
-
Mechanism and fidelity of HIV reverse transcriptase
-
Kati, W. M., Johnson, K. A., Jerva, L. F., and Anderson, K. S. (1992) Mechanism and fidelity of HIV reverse transcriptase J. Biol. Chem. 267, 25988-25997 (Pubitemid 23014006)
-
(1992)
Journal of Biological Chemistry
, vol.267
, Issue.36
, pp. 25988-25997
-
-
Kati, W.M.1
Johnson, K.A.2
Jerva, L.F.3
Anderson, K.S.4
-
2
-
-
58149133507
-
Structure and function of HIV-1 reverse transcriptase: Molecular mechanisms of polymerization and inhibition
-
Sarafianos, S. G., Marchand, B., Das, K., Himmel, D. M., Parniak, M. A., Hughes, S. H., and Arnold, E. (2009) Structure and function of HIV-1 reverse transcriptase: molecular mechanisms of polymerization and inhibition J. Mol. Biol. 385, 693-713
-
(2009)
J. Mol. Biol.
, vol.385
, pp. 693-713
-
-
Sarafianos, S.G.1
Marchand, B.2
Das, K.3
Himmel, D.M.4
Parniak, M.A.5
Hughes, S.H.6
Arnold, E.7
-
3
-
-
3242879168
-
Structural determinants and molecular mechanism for the resistance of HIV-1 RT to nucleoside analogues
-
DOI 10.2174/1389200043335478
-
Deval, J., Courcambeck, J., Selmi, B., Boretto, J., and Canard, B. (2004) Structural determinants and molecular mechanisms for the resistance of HIV-1 RT to nucleoside analogues Curr. Drug Metab. 5, 305-316 (Pubitemid 38997444)
-
(2004)
Current Drug Metabolism
, vol.5
, Issue.4
, pp. 305-316
-
-
Deval, J.1
Courcambeck, J.2
Selmi, B.3
Boretto, J.4
Canard, B.5
-
4
-
-
0027220197
-
Conformational coupling in DNA polymerase fidelity
-
Johnson, K. A. (1993) Conformational coupling in DNA polymerase fidelity Annu. Rev. Biochem. 62, 685-713 (Pubitemid 23237885)
-
(1993)
Annual Review of Biochemistry
, vol.62
, pp. 685-713
-
-
Johnson, K.A.1
-
5
-
-
0028839740
-
Reexamination of induced fit as a determinant of substrate specificity in enzymatic reactions
-
Post, C. B. and Ray, W. J., Jr. (1995) Reexamination of induced fit as a determinant of substrate specificity in enzymatic reactions Biochemistry 34, 15881-15885
-
(1995)
Biochemistry
, vol.34
, pp. 15881-15885
-
-
Post, C.B.1
Ray, Jr.W.J.2
-
6
-
-
0002724139
-
The role of induced fit and conformational changes of enzymes in specificity and catalysis
-
Herschlag, D. (1988) The role of induced fit and conformational changes of enzymes in specificity and catalysis Bioorg. Chem. 16, 62-96
-
(1988)
Bioorg. Chem.
, vol.16
, pp. 62-96
-
-
Herschlag, D.1
-
7
-
-
33747462891
-
A new paradigm for DNA polymerase specificity
-
DOI 10.1021/bi060993z
-
Tsai, Y. C. and Johnson, K. A. (2006) A new paradigm for DNA polymerase specificity Biochemistry 45, 9675-9687 (Pubitemid 44257415)
-
(2006)
Biochemistry
, vol.45
, Issue.32
, pp. 9675-9687
-
-
Tsai, Y.-C.1
Johnson, K.A.2
-
8
-
-
77952388742
-
Nucleotide-dependent conformational change governs specificity and analog discrimination by HIV reverse transcriptase
-
Kellinger, M. W. and Johnson, K. A. (2010) Nucleotide-dependent conformational change governs specificity and analog discrimination by HIV reverse transcriptase Proc. Natl. Acad. Sci. U.S.A. 107, 7734-7739
-
(2010)
Proc. Natl. Acad. Sci. U.S.A.
, vol.107
, pp. 7734-7739
-
-
Kellinger, M.W.1
Johnson, K.A.2
-
9
-
-
0024310253
-
Multiple mutations in HIV-1 reverse transcriptase confer high-level resistance to zidovudine (AZT)
-
Larder, B. A. and Kemp, S. D. (1989) Multiple mutations in HIV-1 reverse transcriptase confer high-level resistance to zidovudine (AZT) Science 246, 1155-1158 (Pubitemid 20012773)
-
(1989)
Science
, vol.246
, Issue.4934
, pp. 1155-1158
-
-
Larder, B.A.1
Kemp, S.D.2
-
10
-
-
0026755210
-
Biochemical studies on the reverse transcriptase and RNase H activities from human immunodeficiency virus strains resistant to 3′-azido-3′- deoxythymidine
-
Lacey, S. F., Reardon, J. E., Furfine, E. S., Kunkel, T. A., Bebenek, K., Eckert, K. A., Kemp, S. D., and Larder, B. A. (1992) Biochemical studies on the reverse transcriptase and RNase H activities from human immunodeficiency virus strains resistant to 3′-azido-3′-deoxythymidine J. Biol. Chem. 267, 15789-15794
-
(1992)
J. Biol. Chem.
, vol.267
, pp. 15789-15794
-
-
Lacey, S.F.1
Reardon, J.E.2
Furfine, E.S.3
Kunkel, T.A.4
Bebenek, K.5
Eckert, K.A.6
Kemp, S.D.7
Larder, B.A.8
-
11
-
-
0030703245
-
Pre-steady-state kinetic characterization of wild type and 3'-azido-3'- deoxythymidine (AZT) resistant human immunodeficiency virus type 1 reverse transcriptase: Implication of RNA directed DNA polymerization in the mechanism of AZT resistance
-
DOI 10.1021/bi9713862
-
Kerr, S. G. and Anderson, K. S. (1997) Pre-steady-state kinetic characterization of wild type and 3′-azido-3′-deoxythymidine (AZT) resistant human immunodeficiency virus type 1 reverse transcriptase: implication of RNA directed DNA polymerization in the mechanism of AZT resistance Biochemistry 36, 14064-14070 (Pubitemid 27509841)
-
(1997)
Biochemistry
, vol.36
, Issue.46
, pp. 14064-14070
-
-
Kerr, S.G.1
Anderson, K.S.2
-
12
-
-
0035031936
-
Selective excision of AZTMP by drug-resistant human immunodeficiency virus reverse transcriptase
-
DOI 10.1128/JVI.75.10.4832-4842.2001
-
Boyer, P. L., Sarafianos, S. G., Arnold, E., and Hughes, S. H. (2001) Selective excision of AZTMP by drug-resistant human immunodeficiency virus reverse transcriptase J. Virol. 75, 4832-4842 (Pubitemid 32381526)
-
(2001)
Journal of Virology
, vol.75
, Issue.10
, pp. 4832-4842
-
-
Boyer, P.L.1
Sarafianos, S.G.2
Arnold, E.3
Hughes, S.H.4
-
13
-
-
60549112465
-
FitSpace Explorer: An algorithm to evaluate multidimensional parameter space in fitting kinetic data
-
Johnson, K. A., Simpson, Z. B., and Blom, T. (2009) FitSpace Explorer: An algorithm to evaluate multidimensional parameter space in fitting kinetic data Anal. Biochem. 387, 30-41
-
(2009)
Anal. Biochem.
, vol.387
, pp. 30-41
-
-
Johnson, K.A.1
Simpson, Z.B.2
Blom, T.3
-
14
-
-
60549105802
-
Global Kinetic Explorer: A new computer program for dynamic simulation and fitting of kinetic data
-
Johnson, K. A., Simpson, Z. B., and Blom, T. (2009) Global Kinetic Explorer: A new computer program for dynamic simulation and fitting of kinetic data Anal. Biochem. 387, 20-29
-
(2009)
Anal. Biochem.
, vol.387
, pp. 20-29
-
-
Johnson, K.A.1
Simpson, Z.B.2
Blom, T.3
-
15
-
-
36749085845
-
A novel mechanism of selectivity against AZT by the human mitochondrial DNA polymerase
-
DOI 10.1093/nar/gkm695
-
Hanes, J. W. and Johnson, K. A. (2007) A novel mechanism of selectivity against AZT by the human mitochondrial DNA polymerase Nucleic Acids Res. 35, 6973-6983 (Pubitemid 350201815)
-
(2007)
Nucleic Acids Research
, vol.35
, Issue.20
, pp. 6973-6983
-
-
Hanes, J.W.1
Johnson, K.A.2
-
16
-
-
0033014502
-
HIV resistance to zidovudine: The role of pyrophosphorolysis
-
DOI 10.1054/drup.1999.0076
-
Arion, D. and Parniak, M. A. (1999) HIV resistance to zidovudine: the role of pyrophosphorolysis Drug Resist.Updat. 2, 91-95 (Pubitemid 29254065)
-
(1999)
Drug Resistance Updates
, vol.2
, Issue.2
, pp. 91-95
-
-
Arion, D.1
Parniak, M.A.2
-
17
-
-
0033165851
-
A mechanism of AZT resistance: An increase in nucleotide-dependent primer unblocking by mutant HIV-1 reverse transcriptase
-
DOI 10.1016/S1097-2765(00)80185-9
-
Meyer, P. R., Matsuura, S. E., Mian, A. M., So, A. G., and Scott, W. A. (1999) A mechanism of AZT resistance: an increase in nucleotide-dependent primer unblocking by mutant HIV-1 reverse transcriptase Mol. Cell 4, 35-43 (Pubitemid 29386129)
-
(1999)
Molecular Cell
, vol.4
, Issue.1
, pp. 35-43
-
-
Meyer, P.R.1
Matsuura, S.E.2
Mohsin Mian, A.3
So, A.G.4
Scott, W.A.5
-
18
-
-
18744365757
-
Structures of HIV-1 reverse transcriptase with pre- and post-translocation AZTMP-terminated DNA
-
DOI 10.1093/emboj/cdf637
-
Sarafianos, S. G., Clark, A. D., Jr., Das, K., Tuske, S., Birktoft, J. J., Ilankumaran, P., Ramesha, A. R., Sayer, J. M., Jerina, D. M., Boyer, P. L., Hughes, S. H., and Arnold, E. (2002) Structures of HIV-1 reverse transcriptase with pre- and post-translocation AZTMP-terminated DNA EMBO J. 21, 6614-6624 (Pubitemid 35448438)
-
(2002)
EMBO Journal
, vol.21
, Issue.23
, pp. 6614-6624
-
-
Sarafianos, S.G.1
Clark Jr., A.D.2
Das, K.3
Tuske, S.4
Birktoft, J.J.5
Ilankumaran, P.6
Ramesha, A.R.7
Sayer, J.M.8
Jerina, D.M.9
Boyer, P.L.10
Hughes, S.H.11
Arnold, E.12
-
19
-
-
77957797787
-
Structural basis of HIV-1 resistance to AZT by excision
-
not supplied
-
Tu, X., Das, K., Han, Q., Bauman, J. D., Clark, A. D., Hou, X., Frenkel, Y. V., Gaffney, B. L., Jones, R. A., Boyer, P. L., Hughes, S. H., Sarafianos, S. G., and Arnold, E. Structural basis of HIV-1 resistance to AZT by excision. Nat. Struct. Mol. Biol. 2010, not supplied.
-
(2010)
Nat. Struct. Mol. Biol.
-
-
Tu, X.1
Das, K.2
Han, Q.3
Bauman, J.D.4
Clark, A.D.5
Hou, X.6
Frenkel, Y.V.7
Gaffney, B.L.8
Jones, R.A.9
Boyer, P.L.10
Hughes, S.H.11
Sarafianos, S.G.12
Arnold, E.13
-
20
-
-
0037250521
-
Human immunodeficiency virus reverse transcriptase and protease sequence database
-
DOI 10.1093/nar/gkg100
-
Rhee, S. Y., Gonzales, M. J., Kantor, R., Betts, B. J., Ravela, J., and Shafer, R. W. (2003) Human immunodeficiency virus reverse transcriptase and protease sequence database Nucleic Acids Res. 31, 298-303 (Pubitemid 36150389)
-
(2003)
Nucleic Acids Research
, vol.31
, Issue.1
, pp. 298-303
-
-
Rhee, S.-Y.1
Gonzales, M.J.2
Kantor, R.3
Betts, B.J.4
Ravela, J.5
Shafer, R.W.6
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