메뉴 건너뛰기




Volumn 13, Issue 6, 2011, Pages 1611-1621

Energy metabolism and multiple respiratory pathways revealed by genome sequencing of Desulfurispirillum indicum strain S5

Author keywords

[No Author keywords available]

Indexed keywords

ARSENATE REDUCTASE; ARSENIC ACID; ARSENIC ACID DERIVATIVE; NITRATE REDUCTASE; OXIDOREDUCTASE;

EID: 79958014476     PISSN: 14622912     EISSN: 14622920     Source Type: Journal    
DOI: 10.1111/j.1462-2920.2011.02473.x     Document Type: Article
Times cited : (24)

References (64)
  • 3
  • 4
    • 0035102909 scopus 로고    scopus 로고
    • The coordination and function of the redox centers of the membrane-bound nitrate reductases
    • Blasco, F., Guigliarelli, B., Magalon, A., Giordano, G., and Rothery, R.A. (2001) The coordination and function of the redox centers of the membrane-bound nitrate reductases. Cell Mol Life Sci 58: 179-193.
    • (2001) Cell Mol Life Sci , vol.58 , pp. 179-193
    • Blasco, F.1    Guigliarelli, B.2    Magalon, A.3    Giordano, G.4    Rothery, R.A.5
  • 5
    • 1842833398 scopus 로고    scopus 로고
    • NapGH components of the periplasmic nitrate reductase of Escherichia coli K-12: location, topology and physiological roles in quinol oxidation and redox balancing
    • Brondijk, T.H.C., Nilavongse, A., Filenko, N., Richardson, D.J., and Cole, J.A. (2004) NapGH components of the periplasmic nitrate reductase of Escherichia coli K-12: location, topology and physiological roles in quinol oxidation and redox balancing. Biochem J 379: 47-55.
    • (2004) Biochem J , vol.379 , pp. 47-55
    • Brondijk, T.H.C.1    Nilavongse, A.2    Filenko, N.3    Richardson, D.J.4    Cole, J.A.5
  • 6
    • 0028837094 scopus 로고
    • The ars operon of Escherichia coli confers arsenical and antimonial resistance
    • Carlin, A., Shi, W., Dey, S., and Rosen, B.P. (1995) The ars operon of Escherichia coli confers arsenical and antimonial resistance. J Bacteriol 177: 981-986.
    • (1995) J Bacteriol , vol.177 , pp. 981-986
    • Carlin, A.1    Shi, W.2    Dey, S.3    Rosen, B.P.4
  • 7
    • 58049208278 scopus 로고    scopus 로고
    • DNAPlotter: circular and linear interactive genome visualization
    • Carver, T., Thomson, N., Bleasby, A., Berriman, M., and Parkhill, J. (2008) DNAPlotter: circular and linear interactive genome visualization. Bioinformatics 25: 119-120.
    • (2008) Bioinformatics , vol.25 , pp. 119-120
    • Carver, T.1    Thomson, N.2    Bleasby, A.3    Berriman, M.4    Parkhill, J.5
  • 9
    • 0027295963 scopus 로고
    • The periplasmic nitrite reductase of Thauera selenatis may catalyze the reduction of selenite to elemental selenium
    • DeMoll-Decker, H., and Macy, J.M. (1993) The periplasmic nitrite reductase of Thauera selenatis may catalyze the reduction of selenite to elemental selenium. Arch Microbiol 160: 241-247.
    • (1993) Arch Microbiol , vol.160 , pp. 241-247
    • DeMoll-Decker, H.1    Macy, J.M.2
  • 10
    • 0003123613 scopus 로고    scopus 로고
    • Crystal structure of the first dissimilatory nitrate reductase at 1.9Å solved by MAD methods
    • Dias, J.M., Than, M.E., Humm, A., Huber, R., Bourenkov, G.P., Bartunik, H.D., etal. (1999) Crystal structure of the first dissimilatory nitrate reductase at 1.9Å solved by MAD methods. Structure 7: 65-79.
    • (1999) Structure , vol.7 , pp. 65-79
    • Dias, J.M.1    Than, M.E.2    Humm, A.3    Huber, R.4    Bourenkov, G.P.5    Bartunik, H.D.6
  • 11
    • 0026574924 scopus 로고
    • The narJ gene product is required for biogenesis of respiratory nitrate reductase in Escherichia coli
    • Dubourdieu, M., and DeMoss, J.A. (1992) The narJ gene product is required for biogenesis of respiratory nitrate reductase in Escherichia coli. J Bacteriol 174: 867-872.
    • (1992) J Bacteriol , vol.174 , pp. 867-872
    • Dubourdieu, M.1    DeMoss, J.A.2
  • 12
    • 0031978181 scopus 로고    scopus 로고
    • Base-calling of automated sequencer traces using phred. II. Error probabilities
    • Ewing, B., and Green, P. (1998) Base-calling of automated sequencer traces using phred. II. Error probabilities. Genome Res 8: 186-194.
    • (1998) Genome Res , vol.8 , pp. 186-194
    • Ewing, B.1    Green, P.2
  • 13
    • 0031955518 scopus 로고    scopus 로고
    • Base-calling of automated sequencer traces using phred. I. Accuracy assessment
    • Ewing, B., Hillier, L., Wendl, M.C., and Green, P. (1998) Base-calling of automated sequencer traces using phred. I. Accuracy assessment. Genome Res 8: 175-185.
    • (1998) Genome Res , vol.8 , pp. 175-185
    • Ewing, B.1    Hillier, L.2    Wendl, M.C.3    Green, P.4
  • 14
    • 2342464829 scopus 로고    scopus 로고
    • Detection and characterization of a dehalogenating microorganism by terminal restriction fragment length polymorphism fingerprinting of 16S rRNA in a sulfidogenic, 2-bromophenol-utilizing enrichment
    • Fennell, D., Rhee, S.K., Ahn, Y.B., Häggblom, M.M., and Kerkhof, L.J. (2004) Detection and characterization of a dehalogenating microorganism by terminal restriction fragment length polymorphism fingerprinting of 16S rRNA in a sulfidogenic, 2-bromophenol-utilizing enrichment. Appl Environ Microbiol 70: 1169-1175.
    • (2004) Appl Environ Microbiol , vol.70 , pp. 1169-1175
    • Fennell, D.1    Rhee, S.K.2    Ahn, Y.B.3    Häggblom, M.M.4    Kerkhof, L.J.5
  • 15
    • 33646489626 scopus 로고    scopus 로고
    • Bacterial nitrate reductases: molecular and biological aspects of nitrate reduction
    • González, P.J., Correia, C., Moura, I., Brondino, C.D., and Moura, J.J.G. (2006) Bacterial nitrate reductases: molecular and biological aspects of nitrate reduction. J Inorg Biochem 100: 1015-1023.
    • (2006) J Inorg Biochem , vol.100 , pp. 1015-1023
    • González, P.J.1    Correia, C.2    Moura, I.3    Brondino, C.D.4    Moura, J.J.G.5
  • 16
    • 0031955116 scopus 로고    scopus 로고
    • Consed: a graphical tool for sequence finishing
    • Gordon, D., Abajian, C., and Green, P. (1998) Consed: a graphical tool for sequence finishing. Genome Res 8: 195-202.
    • (1998) Genome Res , vol.8 , pp. 195-202
    • Gordon, D.1    Abajian, C.2    Green, P.3
  • 17
    • 67349267351 scopus 로고    scopus 로고
    • A genetic analysis of in vivo selenate reduction by Salmonella enterica serovar Typhimurium LT2 and Escherichia coli
    • Guymer, D., Maillard, J., and Sargent, F. (2009) A genetic analysis of in vivo selenate reduction by Salmonella enterica serovar Typhimurium LT2 and Escherichia coli. Arch Microbiol 191: 519-528.
    • (2009) Arch Microbiol , vol.191 , pp. 519-528
    • Guymer, D.1    Maillard, J.2    Sargent, F.3
  • 18
    • 33751109989 scopus 로고    scopus 로고
    • Finishing repeat regions automatically with Dupfinisher
    • In Arabnia, H.R., and Valafar, H. (eds). Las Vegas, NV, USA: CSREA Press
    • Han, C., and Chain, P. (2006) Finishing repeat regions automatically with Dupfinisher. In Proceeding of the 2006 International Conference on Bioinformatics & Computational Biology. Arabnia, H.R., and Valafar, H. (eds). Las Vegas, NV, USA: CSREA Press, pp. 141-146.
    • (2006) Proceeding of the 2006 International Conference on Bioinformatics & Computational Biology , pp. 141-146
    • Han, C.1    Chain, P.2
  • 20
    • 0033693825 scopus 로고    scopus 로고
    • Respiration of arsenateand selenate by hyperthermophilic archaea
    • Huber, R., Sacher, M., Vollmann, A., Huber, H., and Rose, D. (2000) Respiration of arsenateand selenate by hyperthermophilic archaea. Syst Appl Microbiol 23: 305-314.
    • (2000) Syst Appl Microbiol , vol.23 , pp. 305-314
    • Huber, R.1    Sacher, M.2    Vollmann, A.3    Huber, H.4    Rose, D.5
  • 21
    • 0027289343 scopus 로고
    • Comparison of nucleic acid hybridization and fluorometry for measurement of the relationship between RNA/DNA ratio and growth rate in a marine bacterium
    • Kerkhof, L., and Ward, B.B. (1993) Comparison of nucleic acid hybridization and fluorometry for measurement of the relationship between RNA/DNA ratio and growth rate in a marine bacterium. Appl Environ Microbiol 59: 1303-1309.
    • (1993) Appl Environ Microbiol , vol.59 , pp. 1303-1309
    • Kerkhof, L.1    Ward, B.B.2
  • 22
    • 66349117533 scopus 로고    scopus 로고
    • Electron transport chains and bioenergetics of respiratory nitrogen metabolism in Wolinella succinogenes and other Epsilonproteobacteria
    • Kern, M., and Simon, J. (2009) Electron transport chains and bioenergetics of respiratory nitrogen metabolism in Wolinella succinogenes and other Epsilonproteobacteria. Biochim Biophys Acta 1787: 646-656.
    • (2009) Biochim Biophys Acta , vol.1787 , pp. 646-656
    • Kern, M.1    Simon, J.2
  • 23
    • 0030906745 scopus 로고    scopus 로고
    • Molybdenum-cofactor-containing enzymes: structure and mechanism
    • Kisker, C., Schindelin, H., and Rees, D. (1997) Molybdenum-cofactor-containing enzymes: structure and mechanism. Annu Rev Biochem 66: 233-267.
    • (1997) Annu Rev Biochem , vol.66 , pp. 233-267
    • Kisker, C.1    Schindelin, H.2    Rees, D.3
  • 24
    • 0032145466 scopus 로고    scopus 로고
    • Purification and characterization of the respiratory arsenate reductase of Chrysiogenes arsenatis
    • Krafft, T., and Macy, J.M. (1998) Purification and characterization of the respiratory arsenate reductase of Chrysiogenes arsenatis. Eur J Biochem 255: 647-653.
    • (1998) Eur J Biochem , vol.255 , pp. 647-653
    • Krafft, T.1    Macy, J.M.2
  • 25
    • 34248382870 scopus 로고    scopus 로고
    • Arsenate resistance in Desulfovibrio desulfuricans G20 by an arsRBCC operon and an arsC gene
    • Li, X., and Krumholz, L.R. (2007) Arsenate resistance in Desulfovibrio desulfuricans G20 by an arsRBCC operon and an arsC gene. J Bacteriol 189: 3705-3711.
    • (2007) J Bacteriol , vol.189 , pp. 3705-3711
    • Li, X.1    Krumholz, L.R.2
  • 26
    • 0038541683 scopus 로고    scopus 로고
    • Microbial reduction of metals and radionucleotides
    • Lloyd, J.R. (2003) Microbial reduction of metals and radionucleotides. FEMS Microbiol Rev 27: 411-425.
    • (2003) FEMS Microbiol Rev , vol.27 , pp. 411-425
    • Lloyd, J.R.1
  • 27
    • 77953297724 scopus 로고    scopus 로고
    • Quinal-cytochrome c oxidoreductase and cytochrome c4 mediate electron transfer during selenate respiration in Thauera selenatis
    • Lowe, E.C., Bydder, S., Hartshorne, R.S., Tape, H.L.U., Dridge, E.J., Debieux, C.M., etal. (2010) Quinal-cytochrome c oxidoreductase and cytochrome c4 mediate electron transfer during selenate respiration in Thauera selenatis. J Biol Chem 285: 18433-18442.
    • (2010) J Biol Chem , vol.285 , pp. 18433-18442
    • Lowe, E.C.1    Bydder, S.2    Hartshorne, R.S.3    Tape, H.L.U.4    Dridge, E.J.5    Debieux, C.M.6
  • 28
    • 0027408903 scopus 로고
    • Thauera selenatis gen. nov., sp. nov., a member of the beta subclass of Proteobacteria with a novel type of anaerobic respiration
    • Macy, J.M., Rech, S., Auling, G., Dorsch, M., Stackebrandt, E., and Sly, L.I. (1993) Thauera selenatis gen. nov., sp. nov., a member of the beta subclass of Proteobacteria with a novel type of anaerobic respiration. Int J Syst Bacteriol 43: 135-142.
    • (1993) Int J Syst Bacteriol , vol.43 , pp. 135-142
    • Macy, J.M.1    Rech, S.2    Auling, G.3    Dorsch, M.4    Stackebrandt, E.5    Sly, L.I.6
  • 29
    • 0029817513 scopus 로고    scopus 로고
    • Chrysiogenes arsenatis gen. nov., sp. nov., a new arsenate-respiring bacterium isolated from gold mine wastewater
    • Macy, J.M., Nunan, K., Hagen, K.D., Dixon, D.R., Harbour, P.J., Cahill, M., and Sly, L.I. (1996) Chrysiogenes arsenatis gen. nov., sp. nov., a new arsenate-respiring bacterium isolated from gold mine wastewater. Int J Syst Bacteriol 47: 1153-1157.
    • (1996) Int J Syst Bacteriol , vol.47 , pp. 1153-1157
    • Macy, J.M.1    Nunan, K.2    Hagen, K.D.3    Dixon, D.R.4    Harbour, P.J.5    Cahill, M.6    Sly, L.I.7
  • 30
    • 0033963359 scopus 로고    scopus 로고
    • Two new arsenate/sulfate-reducing bacteria: mechanisms of arsenate reduction
    • Macy, J.M., Santini, J.M., Pauling, B.V., O'Neill, A.H., and Sly, L.I. (2000) Two new arsenate/sulfate-reducing bacteria: mechanisms of arsenate reduction. Arch Microbiol 173: 49-57.
    • (2000) Arch Microbiol , vol.173 , pp. 49-57
    • Macy, J.M.1    Santini, J.M.2    Pauling, B.V.3    O'Neill, A.H.4    Sly, L.I.5
  • 31
    • 37549027623 scopus 로고    scopus 로고
    • Characterization of the arsenate respiratory reductase from Shewanella sp. strain ANA-3
    • Malasarn, D., Keeffe, J.R., and Newman, D.K. (2008) Characterization of the arsenate respiratory reductase from Shewanella sp. strain ANA-3. J Bacteriol 190: 135-142.
    • (2008) J Bacteriol , vol.190 , pp. 135-142
    • Malasarn, D.1    Keeffe, J.R.2    Newman, D.K.3
  • 32
    • 24044455869 scopus 로고    scopus 로고
    • Genome sequencing in microfabricated high-density picolitre reactors
    • Margulies, M., Egholm, M., Altman, W.E., Attiya, S., Bader, J.S., Bemben, L.A., etal. (2005) Genome sequencing in microfabricated high-density picolitre reactors. Nature 437: 326-327.
    • (2005) Nature , vol.437 , pp. 326-327
    • Margulies, M.1    Egholm, M.2    Altman, W.E.3    Attiya, S.4    Bader, J.S.5    Bemben, L.A.6
  • 33
    • 21744458235 scopus 로고    scopus 로고
    • Nitrate reduction by Desulfovibrio desulfuricans: a periplasmic nitrate reductase system that lacks NapB, but includes a unique tetraheme c-type cytochrome, NapM
    • Marietou, A., Richardson, D.J., Cole, J.A., and Mohan, S. (2005) Nitrate reduction by Desulfovibrio desulfuricans: a periplasmic nitrate reductase system that lacks NapB, but includes a unique tetraheme c-type cytochrome, NapM. FEMS Microbiol Lett 24: 8217-8225.
    • (2005) FEMS Microbiol Lett , vol.24 , pp. 8217-8225
    • Marietou, A.1    Richardson, D.J.2    Cole, J.A.3    Mohan, S.4
  • 35
    • 33745727162 scopus 로고    scopus 로고
    • Sedimenticola selenatireducens, gen. nov., sp. nov., an anaerobic selenate-respiring bacterium isolated from estuarine sediment
    • Narasingarao, P., and Häggblom, M.M. (2006) Sedimenticola selenatireducens, gen. nov., sp. nov., an anaerobic selenate-respiring bacterium isolated from estuarine sediment. Syst Appl Microbiol 29: 382-388.
    • (2006) Syst Appl Microbiol , vol.29 , pp. 382-388
    • Narasingarao, P.1    Häggblom, M.M.2
  • 36
    • 34249885631 scopus 로고    scopus 로고
    • Anaerobic selenate-respiring bacteria are diverse and ubiquitous in aquatic sediments
    • Narasingarao, P., and Häggblom, M.M. (2007a) Anaerobic selenate-respiring bacteria are diverse and ubiquitous in aquatic sediments. Appl Environ Microbiol 73: 3519-3527.
    • (2007) Appl Environ Microbiol , vol.73 , pp. 3519-3527
    • Narasingarao, P.1    Häggblom, M.M.2
  • 37
    • 34848891924 scopus 로고    scopus 로고
    • Pelobacter seleniigenes sp. nov., a selenate-respiring bacterium
    • Narasingarao, P., and Häggblom, M.M. (2007b) Pelobacter seleniigenes sp. nov., a selenate-respiring bacterium. Int J Syst Evol Microbiol 57: 1937-1942.
    • (2007) Int J Syst Evol Microbiol , vol.57 , pp. 1937-1942
    • Narasingarao, P.1    Häggblom, M.M.2
  • 38
    • 0037656045 scopus 로고    scopus 로고
    • The ecology of arsenic
    • Oremland, R., and Stolz, J. (2003) The ecology of arsenic. Science 300: 939-944.
    • (2003) Science , vol.300 , pp. 939-944
    • Oremland, R.1    Stolz, J.2
  • 40
    • 0021444159 scopus 로고
    • Repeating functional domains in the pyruvate dehydrogenase enzyme complex of Escherichia coli
    • Packman, L.C., Hale, G., and Perham, R.N. (1984) Repeating functional domains in the pyruvate dehydrogenase enzyme complex of Escherichia coli. EMBO J 3: 1315-1319.
    • (1984) EMBO J , vol.3 , pp. 1315-1319
    • Packman, L.C.1    Hale, G.2    Perham, R.N.3
  • 42
    • 27744451137 scopus 로고    scopus 로고
    • Arsenate respiratory reductase gene (arrA) for Desulfosporosinus sp. strain Y5
    • Pérez-Jiménez, J.R., DeFraia, C., and Young, L.Y. (2005) Arsenate respiratory reductase gene (arrA) for Desulfosporosinus sp. strain Y5. Biochem Biophys Res Commun 338: 825-829.
    • (2005) Biochem Biophys Res Commun , vol.338 , pp. 825-829
    • Pérez-Jiménez, J.R.1    DeFraia, C.2    Young, L.Y.3
  • 43
    • 79952406135 scopus 로고    scopus 로고
    • Desulfurispirillum indicum sp. nov., a selenate and selenite respiring bacterium isolated from an estuarine canal in southern India
    • Rauschenbach, I., Narasingarao, P., and Häggblom, M.M. (2011) Desulfurispirillum indicum sp. nov., a selenate and selenite respiring bacterium isolated from an estuarine canal in southern India. Int J Syst Evol Microbiol 61: 654-658.
    • (2011) Int J Syst Evol Microbiol , vol.61 , pp. 654-658
    • Rauschenbach, I.1    Narasingarao, P.2    Häggblom, M.M.3
  • 44
    • 0034015380 scopus 로고    scopus 로고
    • Bacterial respiration: a flexible process for a changing environment
    • Richardson, D.J. (2000) Bacterial respiration: a flexible process for a changing environment. Microbiology 146: 551-571.
    • (2000) Microbiology , vol.146 , pp. 551-571
    • Richardson, D.J.1
  • 45
    • 0035107176 scopus 로고    scopus 로고
    • Functional, biochemical and genetic diversity of prokaryotic nitrate reductases
    • Richardson, D.J., Berks, B.C., Russell, D.A., Spiro, S., and Taylor, C.J. (2001) Functional, biochemical and genetic diversity of prokaryotic nitrate reductases. Cell Mol Life Sci 58: 165-178.
    • (2001) Cell Mol Life Sci , vol.58 , pp. 165-178
    • Richardson, D.J.1    Berks, B.C.2    Russell, D.A.3    Spiro, S.4    Taylor, C.J.5
  • 46
    • 0033134885 scopus 로고    scopus 로고
    • Families of arsenic transporters
    • Rosen, B.P. (1999) Families of arsenic transporters. Trends Microbiol 7: 207-212.
    • (1999) Trends Microbiol , vol.7 , pp. 207-212
    • Rosen, B.P.1
  • 47
    • 0028244538 scopus 로고
    • NarK is a nitrite-extrusion system involved in anaerobic nitrate respiration by Escherichia coli
    • Rowe, J.J., Ubbink-Kok, T., Molenaar, D., Konings, W.N., and Driessen, A.J. (1994) NarK is a nitrite-extrusion system involved in anaerobic nitrate respiration by Escherichia coli. Mol Microbiol 12: 579-586.
    • (1994) Mol Microbiol , vol.12 , pp. 579-586
    • Rowe, J.J.1    Ubbink-Kok, T.2    Molenaar, D.3    Konings, W.N.4    Driessen, A.J.5
  • 48
    • 0035514940 scopus 로고    scopus 로고
    • Characterization of the reduction of selenate and tellurite by nitrate reductases
    • Sabaty, M., Avazeri, C., Pignoli, D., and Vermiglio, A. (2001) Characterization of the reduction of selenate and tellurite by nitrate reductases. Appl Environ Microbiol 67: 1522-1526.
    • (2001) Appl Environ Microbiol , vol.67 , pp. 1522-1526
    • Sabaty, M.1    Avazeri, C.2    Pignoli, D.3    Vermiglio, A.4
  • 49
    • 27144529950 scopus 로고    scopus 로고
    • Expression dynamics of arsenate respiration and detoxification in Shewanella sp. strain ANA-3
    • Saltikov, C., Wildman, R.A., and Newman, D.K. (2005) Expression dynamics of arsenate respiration and detoxification in Shewanella sp. strain ANA-3. J Bacteriol 187: 7390-7396.
    • (2005) J Bacteriol , vol.187 , pp. 7390-7396
    • Saltikov, C.1    Wildman, R.A.2    Newman, D.K.3
  • 50
    • 0242696464 scopus 로고    scopus 로고
    • Isolation and characterization of the selenate reductase from Thauera selenatis
    • Schröder, I., Rech, S., Krafft, T., and Macy, J.M. (1997) Isolation and characterization of the selenate reductase from Thauera selenatis. J Biol Chem 272: 23765-23868.
    • (1997) J Biol Chem , vol.272 , pp. 23765-23868
    • Schröder, I.1    Rech, S.2    Krafft, T.3    Macy, J.M.4
  • 51
    • 68949107281 scopus 로고    scopus 로고
    • Molybdenum cofactors, enzymes and pathways
    • Schwarz, G., Mendel, R.R., and Ribbe, M.W. (2009) Molybdenum cofactors, enzymes and pathways. Nature 13: 839-847.
    • (2009) Nature , vol.13 , pp. 839-847
    • Schwarz, G.1    Mendel, R.R.2    Ribbe, M.W.3
  • 52
    • 0033709553 scopus 로고    scopus 로고
    • Control of periplasmic nitrate reductase gene expression (napEDABC) from Paracoccus pantotrophus in response to oxygen and carbon substrates
    • Sears, H.J., Sawers, G., Berks, B.C., Ferguson, S.J., and Richardson, D.J. (2000) Control of periplasmic nitrate reductase gene expression (napEDABC) from Paracoccus pantotrophus in response to oxygen and carbon substrates. Microbiology 146: 2877-2985.
    • (2000) Microbiology , vol.146 , pp. 2877-2985
    • Sears, H.J.1    Sawers, G.2    Berks, B.C.3    Ferguson, S.J.4    Richardson, D.J.5
  • 53
    • 0029792315 scopus 로고    scopus 로고
    • Bacterial heavy metal resistance: new surprises
    • Silver, S., and Phung, L.T. (1996) Bacterial heavy metal resistance: new surprises. Annu Rev Microbiol 50: 753-789.
    • (1996) Annu Rev Microbiol , vol.50 , pp. 753-789
    • Silver, S.1    Phung, L.T.2
  • 54
    • 0036024581 scopus 로고    scopus 로고
    • Enzymology and bioenergetics of respiratory nitrite ammonification
    • Simon, J. (2002) Enzymology and bioenergetics of respiratory nitrite ammonification. FEMS Microbiol Rev 26: 285-309.
    • (2002) FEMS Microbiol Rev , vol.26 , pp. 285-309
    • Simon, J.1
  • 55
    • 76449102157 scopus 로고    scopus 로고
    • The periplasmic nitrate reductase in Shewanella: the resolution, distribution and functional implications of two NAP isoforms, NapEDABC and NapDAGHB
    • Simpson, P.J.L., Richardson, D.J., and Codd, R. (2010) The periplasmic nitrate reductase in Shewanella: the resolution, distribution and functional implications of two NAP isoforms, NapEDABC and NapDAGHB. Microbiology 156: 302-312.
    • (2010) Microbiology , vol.156 , pp. 302-312
    • Simpson, P.J.L.1    Richardson, D.J.2    Codd, R.3
  • 56
    • 33847293798 scopus 로고    scopus 로고
    • Desulfurispirillum alkaliphilum, gen. nov., sp. nov., a novel obligately anaerobic sulfur- and dissimilatory nitrate-reducing bacterium from a full-scale sulfide-removing bioreactor
    • Sorokin, D.Y., Foti, M., Tindall, B.J., and Muyzer, G. (2007) Desulfurispirillum alkaliphilum, gen. nov., sp. nov., a novel obligately anaerobic sulfur- and dissimilatory nitrate-reducing bacterium from a full-scale sulfide-removing bioreactor. Extremophiles 11: 363-370.
    • (2007) Extremophiles , vol.11 , pp. 363-370
    • Sorokin, D.Y.1    Foti, M.2    Tindall, B.J.3    Muyzer, G.4
  • 57
    • 0032844160 scopus 로고    scopus 로고
    • The ecology of arsenic and selenium
    • Stolz, J.F., and Oremland, R.S. (1999) The ecology of arsenic and selenium. FEMS Microbiol Rev 23: 615-627.
    • (1999) FEMS Microbiol Rev , vol.23 , pp. 615-627
    • Stolz, J.F.1    Oremland, R.S.2
  • 58
    • 0036885882 scopus 로고    scopus 로고
    • Microbial transformation of elements: the case of arsenic and selenium
    • Stolz, J.F., Basu, P., and Oremland, R. (2002) Microbial transformation of elements: the case of arsenic and selenium. Int Microbiol 5: 201-207.
    • (2002) Int Microbiol , vol.5 , pp. 201-207
    • Stolz, J.F.1    Basu, P.2    Oremland, R.3
  • 60
    • 0006301126 scopus 로고    scopus 로고
    • Bacillus arsenicoselenatis sp nov., and Bacillus selenitireducens sp. nov.: two haloalkaliphiles from Mono Lake, California which respire oxyanions of selenium and arsenic
    • Switzer Blum, J., Burns Bind, A., Buzzelli, J., Stolz, J.F., and Oremland, R.S. (1998) Bacillus arsenicoselenatis sp nov., and Bacillus selenitireducens sp. nov.: two haloalkaliphiles from Mono Lake, California which respire oxyanions of selenium and arsenic. Arch Microbiol 171: 19-30.
    • (1998) Arch Microbiol , vol.171 , pp. 19-30
    • Switzer Blum, J.1    Burns Bind, A.2    Buzzelli, J.3    Stolz, J.F.4    Oremland, R.S.5
  • 61
    • 0035079352 scopus 로고    scopus 로고
    • Selenihalanaerobacter shriftii gen. nov., sp. nov., a halophilic anaerobe from Dead Sea sediments that respires selenate
    • Switzer Blum, J., Stolz, J.F., Oren, A., and Oremland, R.S. (2001) Selenihalanaerobacter shriftii gen. nov., sp. nov., a halophilic anaerobe from Dead Sea sediments that respires selenate. Arch Microbiol 175: 208-219.
    • (2001) Arch Microbiol , vol.175 , pp. 208-219
    • Switzer Blum, J.1    Stolz, J.F.2    Oren, A.3    Oremland, R.S.4
  • 62
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0
    • Tamura, K., Dudley, J., Nei, M., and Kumar, S. (2007) MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol Biol Evol 24: 1596-1599.
    • (2007) Mol Biol Evol , vol.24 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 63
    • 67349109113 scopus 로고    scopus 로고
    • Response to excess copper in the hyperthermophile Sulfolobus solfataricus strain 98/2
    • Villafane, A.A., Voskoboynik, Y., Cuebas, M., Ruhl, I., and Bini, E. (2009) Response to excess copper in the hyperthermophile Sulfolobus solfataricus strain 98/2. Biochem Biophys Res Commun 17: 67-71.
    • (2009) Biochem Biophys Res Commun , vol.17 , pp. 67-71
    • Villafane, A.A.1    Voskoboynik, Y.2    Cuebas, M.3    Ruhl, I.4    Bini, E.5
  • 64
    • 43149115851 scopus 로고    scopus 로고
    • Velvet: algorithms for de novo short read assembly using de Bruijn graphs
    • Zerbino, D.R., and Birney, E. (2008) Velvet: algorithms for de novo short read assembly using de Bruijn graphs. Genome Res 18: 821-829.
    • (2008) Genome Res , vol.18 , pp. 821-829
    • Zerbino, D.R.1    Birney, E.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.