Proton HR-MAS MR spectroscopy of oral squamous cell carcinoma tissues: An ex vivo study to identify malignancy induced metabolic fingerprints

Metabolomics

Volumn 7, Issue 2, 2011, Pages 278-288

  Srivastava, Shatakshi ^a   Roy, Raja ^a   Gupta, Vivek ^b   Tiwari, Ashish ^b   Srivastava, Anand N ^b   Sonkar, Abhinav A ^b  

^a SANJAY GANDHI POSTGRADUATE INSTITUTE OF MEDICAL SCIENCES   (India)

^b KING GEORGE'S MEDICAL UNIVERSITY   (India)

Author keywords

HR MAS NMR; Orthogonal signal correction; Partial least square discriminant analysis; Principal component analysis; Squamous cell carcinoma

Indexed keywords

ACETIC ACID; ALANINE; CHOLINE; CREATINE; GLUTAMIC ACID; GLYCINE; ISOLEUCINE; LACTIC ACID; LEUCINE; LYSINE; PHOSPHORYLCHOLINE; POLYUNSATURATED FATTY ACID; TAURINE;

ADULT; ARTICLE; CANCER INVASION; CHEMOMETRIC ANALYSIS; CLASSIFICATION; CLINICAL ARTICLE; CONTROLLED STUDY; DISCRIMINANT ANALYSIS; EX VIVO STUDY; FEMALE; HISTOPATHOLOGY; HUMAN; HUMAN TISSUE; MALE; METABOLITE; METABOLOMICS; MOUTH CARCINOMA; MULTIVARIATE ANALYSIS; ORAL SQUAMOUS CELL CARCINOMA; ORTHOGONAL SIGNAL CORRECTION; PARTIAL LEAST SQUARES REGRESSION; PREDICTION; PRINCIPAL COMPONENT ANALYSIS; PROTON HIGH RESOLUTION MAGIC ANGLE SPINNING MAGNETIC RESONANCE SPECTROSCOPY; PROTON NUCLEAR MAGNETIC RESONANCE; SENSITIVITY AND SPECIFICITY; SIGNAL PROCESSING; SQUAMOUS CELL CARCINOMA; TUMOR GROWTH;

EID: 79957521659     PISSN: 15733882     EISSN: 15733890     Source Type: Journal    
DOI: 10.1007/s11306-010-0253-4     Document Type: Article

References (57)

1. Baracos, V. E., & Mackenzie, M. L. (2006). Investigations of branched-chain amino acids and their metabolites in animal models of cancer. Journal of Nutrition, 136(1 Suppl), 237S-242S.
2. Beckwith-Hall, B. M., Brindle, J. T., Barton, R. H., et al. (2002). Application of orthogonal signal correction to minimise the effects of physical and biological variation in high resolution 1H NMR spectra of biofluids. Analyst, 127(10), 1283-1288.
3. Bezabeh, T., Odlum, O., Nason, R., et al. (2005). Prediction of treatment response in head and neck cancer by magnetic resonance spectroscopy. American Journal of Neuroradiology, 26(2), 2108-2113.
4. Bisbal, M. C. M., Bonmati, L., Piquer, J., et al. (2004). 1H and 13C HRMAS spectroscopy of intact biopsy samples ex vivo and in vivo 1H MRS study of human high grade gliomas. NMR in Biomedicine, 17(2), 191-205.
5. Bollard, M. E., Garrod, S., Holmes, E., et al. (2000). High-resolution (1)H and (1)H-(13)C magic angle spinning NMR spectroscopy of rat liver. Magnetic Resonance in Medicine, 44(2), 201-207.
6. Boyle, J. O., & Strong, E. W. (2001). Oral cavity cancer. London: BC Decker Inc.
7. Brandizzi, D., Gandolfo, M., Velazco, M. L., Cabrini, R. L., & Lanfranchi, H. E. (2008). Clinical features and evolution of oral cancer: A study of 274 cases in Buenos Aires, Argentina. Medicinia Oral, Patologia Oral y Cirugia Bucal, 13(9), E544-E548.
8. Brennan, J. A., Mao, L., Hruban, R. H., et al. (1995). Molecular assessment of histopathological staging in squamous-cell carcinoma of the head and neck. New England Journal of Medicine, 332(7), 429-435.
9. Brindle, J. T., Antti, H., Holmes, E., et al. (2002). Rapid and noninvasive diagnosis of the presence and severity of coronary heart disease using 1H-NMR-based metabonomics. Nature Medicine, 8(12), 1439-1444.
10. Chan, E. C., Koh, P. K., Mal, M., et al. (2009). Metabolic profiling of human colorectal cancer using high-resolution magic angle spinning nuclear magnetic resonance (HR-MAS NMR) spectroscopy and gas chromatography mass spectrometry (GC/MS). Journal of Proteome Research, 8(1), 352-361.
11. Cheng, L. L., Ma, M. J., Becerra, L., et al. (1997a). Quantitative neuropathology by high resolution magic angle spinning proton magnetic resonance spectroscopy. Proceedings of the National Academy of Sciences of the United States of America, 94(12), 6408-6413.
12. Cheng, L. L., Ma, M. J., Becerra, L., et al. (1997b). Quantitative neuropathy by high resolution magic angle spinning proton mgnetic resonance spectroscopy. Proceedings of the National Academy of Sciences of the United States of America, 94, 6408-6413.
13. Cheng, L. L., Chang, W. I., Louis, D. N., & Gonzalez, R. G. (1998). Correlation of High-Resolution Magic Angle Spinning Proton Magnetic Resonance Spectroscopy with histopathology of Intact Human Brain Tumor Specimens. Cancer Research, 58, 1825-1832.
14. Cheng, L. L., Anthony, D. C., Comite, A. R., et al. (2000). Quantification of microheterogeneity in glioblastoma multiforme with ex vivo high resolution magic-angle spinning (HRMAS) proton magnetic resonance spectroscopy. Neuro-Oncology, 2(2), 87-95.
15. Cheng, L. L., Burns, M. A., Taylor, J. L., et al. (2005). Metabolic characterization of human prostate cancer with tissue magnetic resonance spectroscopy. Cancer Research, 65(8), 3030-3034.
16. Cohan, D. M., Popat, S., Kaplan, S. E., et al. (2009). Oropharyngeal cancer: current understanding and management. Current Opinion in Otolaryngology & Head and Neck Surgery, 17(2), 88-94.
17. Crain, R. C., Clark, R. W., & Harvey, B. E. (1983). Role of lipid transfer proteins in the abnormal lipid content of Morris hepatoma mitochondria and microsomes. Cancer Research, 43(7), 3197-3202.
18. Donnell, A., Jin, S., & Zavras, A. I. (2008). Delay in diagnosis of oral cancer. Journal of Stomatological Investigation, 2(1), 15-26.
19. Duarte, I. F., Stanley, E. G., Holmes, E., et al. (2005). Metabolic assessment of human liver transplants from biopsy samples at the donor and recipient stages using high-resolution magic angle spinning 1H NMR spectroscopy. Analytical Chemistry, 77(17), 5570-5578.
20. Facchinetti, M. M., Gandini, N. A., Fermento, M. E., et al. (2010). The expression of sphingosine kinase-1 in head and neck carcinoma. Cells, Tissues, Organs, 192(5), 314-324.
21. Fisher, R. A., & Yates, F. (1957). In statistical tables for biological, agricultural and medical research. London: Oliver and Boyd.
22. Garrod, S., Humpher, E., Connor, S. C., et al. (2001). High-resolution 1H NMR and magic angle spinning NMR spectroscopic investigation of the biochemical effects of 2-bromoethanamine in intact renal and hepatic tissue. Magnetic Resonance in Medicine, 45(5), 781-790.
23. Gavaghan, C. L., Wilson, I. D., & Nicholson, J. K. (2002). Physiological variation in metabolic phenotyping and functional genomic studies: Use of orthogonal signal correction and PLS-DA. FEBS Letters, 530(1-3), 191-196.
24. Green, S. B. (1991). How many subjects does it take to do a regression analysis. Multivariate Behavioral Research, 26(3), 499-510.
25. Griffin, J. L., & Shockcor, J. P. (2004). Metabolic profiles of cancer cells. Nature Reviews Cancer, 4(7), 551-561.
26. Hashibe, M., Brennan, P., Benhamou, S., et al. (2007). Alcohol drinking in never users of tobacco, cigarette, smoking in non-drinkers and the risk of head and neck cancer: pooled analysis in the International Head and Neck Cancer. Journal of the National Cancer Institiute, 99, 777-789.
27. Hermans, R. (2005). Oropharyngeal cancer. Cancer Imaging, 5(Spec No A), S52-S57.
28. Jordan, K. W., & Cheng, L. L. (2007). NMR-based metabolomics approach to target biomarkers for human prostate cancer. Expert Review of Proteomics, 4(3), 389-400.
29. Kao, S. Y., Chen, Y. P., Tu, H. F., et al. (2010). Nuclear STK15 expression is associated with aggressive behaviour of oral carcinoma cells in vivo and in vitro. Journal of Pathology, 222(1), 99-109.
30. Khandekar, S. P., Bagdey, P. S., & Tiwari, R. R. (2006). Oral cancer and some epidemiological factors: A hospital based study. Indian Journal of Community Medicine, 31(3), 157-159.
31. Mashberg, A., & Samit, A. (1995). Early diagnosis of asymptomatic oral and oropharyngeal squamous cancers. CA: A Cancer Journal for Clinicians, 45, 328-351.
32. McFate, T., Mohyeldin, A., Lu, H., et al. (2008). Pyruvate dehydrogenase complex activity controls metabolic and malignant phenotype in cancer cells. Journal of Biological Chemistry, 283(33), 22700-22708.
33. Morton, R., Waite, M., Hartz, J. W., Cunningham, C., & Morris, H. P. (1977). The composition and metabolism of microsomal and mitochondrial membrane lipids in the Morris 7777 hepatoma. Advances in Experimental Medicine and Biology, 92, 381-403.
34. Mukherji, S. K., Schiro, S., Castillo, M., et al. (1996). Proton MR spectroscopy of squamous cell carcinoma of the upper aerodigestive tract: In vitro characteristics. American Journal of Neuroradiology, 17, 1485-1490.
35. Mukherji, S. K., Schiro, S., Castillo, M., et al. (1997). Proton MR spectroscopy of squamous cell carcinoma of the extracranial head and neck: in vitro and in vivo studies. American Journal of Neuroradiology, 18, 1057-1072.
36. Ng, S. H., Yen, T. C., Chang, J. T., et al. (2006). Prospective study of [18F] fluorodeoxyglucose positron emission tomography and computed tomography and magnetic resonance imaging in oral cavity squamous cell carcinoma with palpably negative neck. Journal of Clinical Oncology, 24(27), 4371-4376.
37. Norton, J. A., Shamberger, R., Stein, T. P., Milne, G. W., & Brennan, M. F. (1981). The influence of tumor-bearing on protein metabolism in the rat. Journal of Surgical Research, 30(5), 456-462.
38. Partridge, M., Li, S. R., Pateromichelakis, S., et al. (2000). Detection of minimal residual cancer to investigate why oral tumors recur despite seemingly adequate treatment. Clinical Cancer Research, 6(7), 2718-2725.
39. Podo, F. (1999). Tumor phospholipid metabolism. NMR in Biomedicine, 12, 413-439.
40. Rocha, C. M., Barros, A. S., Gil, A. M., et al. (2010). Metabolic profiling of human lung cancer tissue by 1H high resolution magic angle spinning (HRMAS) NMR spectroscopy. Journal of Proteome Research, 9(1), 319-332.
41. Rosado, J. O., Salvado, M., & Bonatto, D. (2007). Importance of the trans-sulfuration pathway in cancer prevention and promotion. Molecular and Cellular Biochemistry, 301(1-2), 1-12.
42. Rzeski, W., Turski, L., & Ikonomidou, C. (2001). Glutamate antagonists limit tumor growth. Proceedings of the National Academy of Sciences of the United States of America, 98(11), 6372-6377.
43. Sayed, S. E., Bezabeh, T., Odlum, O., et al. (2002). An ex vivo study exploring the diagnostic potential of 1H magnetic resonance spectroscopy in squamous cell carcinoma of the head and neck region. MRS of Head and Neck Tumors, 24, 766-772.
44. Shen, M. R., Chou, C. Y., & Ellory, J. C. (2001). Swelling-activated taurine and K + transport in human cervical cancer cells: association with cell cycle progression. Pflugers Archiv: European Journal of Physiology, 441(6), 787-795.
45. Sinha, R., Anderson, D. E., McDonald, S. S., & Greenwald, P. (2003). Cancer risk and diet in India. Journal of Postgraduate Medicine, 49, 222-228.
46. Sitter, B., Sonnewald, U., Spraul, M., Fjosne, H. E., & Gribbestad, I. S. (2002). High-resolution magic angle spinning MRS of breast cancer tissue. NMR in Biomedicine, 15(5), 327-337.
47. Srivastava, S., Roy, R., Singh, S., et al. (2010). Taurine-a possible fingerprint biomarker in non-muscle invasive bladder cancer: A pilot study by 1H NMR spectroscopy. Cancer Biomarkers: Section A of Disease Markers, 6(1), 11-20.
48. Tessem, M. B., Swanson, M. G., Keshari, K. R., et al. (2008). Evaluation of lactate and alanine as metabolic biomarkers of prostate cancer using 1H HR-MAS spectroscopy of biopsy tissues. Magnetic Resonance in Medicine, 60(3), 510-516.
49. Tugnoli, V., Mucci, A., Schenetti, L., et al. (2004). Molecular characterization of human gatric mucosa by HRMAS magnetic resonance spectroscopy. International Journal of Molecular Medicine, 14, 1065-1071.
50. Tzika, A. A., Cheng, L. L., Goumnerova, L., et al. (2002). Biochemical characterization of pediatric brain tumors by using in vivo and ex vivo magnetic resonance spectroscopy. Journal of Neurosurgery, 96(6), 1023-1031.
51. van Houten, V. M., Leemans, C. R., Kummer, J. A., et al. (2004). Molecular diagnosis of surgical margins and local recurrence in head and neck cancer patients: A prospective study. Clinical Cancer Research, 10(11), 3614-3620.
52. Voorhis, C. R. W. V., & Morgan, B. L. (2007). Understanding power and rules of thumb for determining sample sizes. Tutorials in Quantitative Methods for Psychology, 3(2), 43-50.
53. Wang, Y., Bollard, M. E., Keun, H., et al. (2003). Spectral editing and pattern recognition methods applied to high-resolution magic-angle spinning 1H nuclear magnetic resonance spectroscopy of liver tissues. Analytical Biochemistry, 323(1), 26-32.
54. Wang, Y., Bollard, M. E., Nicholson, J. K., & Holmes, E. (2006). Exploration of the direct metabolic effects of mercury II chloride on the kidney of Sprague-Dawley rats using high-resolution magic angle spinning 1H NMR spectroscopy of intact tissue and pattern recognition. Journal of Pharmaceutical and Biomedical Analysis, 40(2), 375-381.
55. Warburg, O. (1956). On the origin of cancer cells. Science, 123(3191), 309-314.
56. Waridel, F., Estreicher, A., Bron, L., et al. (1997). Field cancerisation and polyclonal p53 mutation in the upper aero-digestive tract. Oncogene, 14(2), 163-169.
57. Wilson, M., Davies, N. P., Grundy, R. G., & Peet, A. C. (2009). A quantitative comparison of metabolite signals as detected by in vivo MRS with ex vivo 1H HR-MAS for childhood brain tumours. NMR in Biomedicine, 22(2), 213-219.