메뉴 건너뛰기




Volumn 11, Issue 5, 2011, Pages 1150-1154

Evolution of the influenza A virus untranslated regions

Author keywords

Evolution; Influenza virus; Noncoding region; Packaging; Phylogenetics; Untranslated region

Indexed keywords

VIRUS RNA;

EID: 79956333329     PISSN: 15671348     EISSN: 15677257     Source Type: Journal    
DOI: 10.1016/j.meegid.2011.04.006     Document Type: Article
Times cited : (23)

References (47)
  • 2
    • 0029558592 scopus 로고
    • The relative amount of an influenza A virus segment present in the viral particle is not affected by a reduction in replication of that segment
    • Bergmann M., Muster T. The relative amount of an influenza A virus segment present in the viral particle is not affected by a reduction in replication of that segment. J. Gen. Virol. 1995, 76(Part 12):3211-3215.
    • (1995) J. Gen. Virol. , vol.76 , Issue.PART 12 , pp. 3211-3215
    • Bergmann, M.1    Muster, T.2
  • 3
    • 0032736987 scopus 로고    scopus 로고
    • Positive selection on the H3 hemagglutinin gene of human influenza virus A
    • Bush R.M., Fitch W.M., Bender C.A., Cox N.J. Positive selection on the H3 hemagglutinin gene of human influenza virus A. Mol. Biol. Evol. 1999, 16(11):1457-1465.
    • (1999) Mol. Biol. Evol. , vol.16 , Issue.11 , pp. 1457-1465
    • Bush, R.M.1    Fitch, W.M.2    Bender, C.A.3    Cox, N.J.4
  • 8
    • 0029853503 scopus 로고    scopus 로고
    • Promoter elements in the influenza vRNA terminal structure
    • Flick R., Neumann G., Hoffmann E., Neumeier E., Hobom G. Promoter elements in the influenza vRNA terminal structure. RNA 1996, 2(10):1046-1057.
    • (1996) RNA , vol.2 , Issue.10 , pp. 1046-1057
    • Flick, R.1    Neumann, G.2    Hoffmann, E.3    Neumeier, E.4    Hobom, G.5
  • 9
    • 0029020773 scopus 로고
    • Characterization of the RNA-fork model of virion RNA in the initiation of transcription in influenza A virus
    • Fodor E., Pritlove D.C., Brownlee G.G. Characterization of the RNA-fork model of virion RNA in the initiation of transcription in influenza A virus. J. Virol. 1995, 69(7):4012-4019.
    • (1995) J. Virol. , vol.69 , Issue.7 , pp. 4012-4019
    • Fodor, E.1    Pritlove, D.C.2    Brownlee, G.G.3
  • 10
    • 14744274632 scopus 로고    scopus 로고
    • Importance of both the coding and the segment-specific noncoding regions of the influenza A virus NS segment for its efficient incorporation into virions
    • Fujii K., Fujii Y., Noda T., Muramoto Y., Watanabe T., Takada A., Goto H., Horimoto T., Kawaoka Y. Importance of both the coding and the segment-specific noncoding regions of the influenza A virus NS segment for its efficient incorporation into virions. J. Virol. 2005, 79(6):3766-3774.
    • (2005) J. Virol. , vol.79 , Issue.6 , pp. 3766-3774
    • Fujii, K.1    Fujii, Y.2    Noda, T.3    Muramoto, Y.4    Watanabe, T.5    Takada, A.6    Goto, H.7    Horimoto, T.8    Kawaoka, Y.9
  • 11
    • 67649995234 scopus 로고    scopus 로고
    • Evolution of the M gene of the influenza A virus in different host species: large-scale sequence analysis
    • Furuse Y., Suzuki A., Kamigaki T., Oshitani H. Evolution of the M gene of the influenza A virus in different host species: large-scale sequence analysis. Virol. J. 2009, 6(1):67.
    • (2009) Virol. J. , vol.6 , Issue.1 , pp. 67
    • Furuse, Y.1    Suzuki, A.2    Kamigaki, T.3    Oshitani, H.4
  • 12
    • 62749163116 scopus 로고    scopus 로고
    • Reversion of influenza A (H3N2) virus from amantadine resistant to amantadine sensitive by further reassortment in Japan during the 2006-to-2007 influenza season
    • Furuse Y., Suzuki A., Kamigaki T., Shimizu M., Fuji N., Oshitani H. Reversion of influenza A (H3N2) virus from amantadine resistant to amantadine sensitive by further reassortment in Japan during the 2006-to-2007 influenza season. J. Clin. Microbiol. 2009, 47(3):841-844.
    • (2009) J. Clin. Microbiol. , vol.47 , Issue.3 , pp. 841-844
    • Furuse, Y.1    Suzuki, A.2    Kamigaki, T.3    Shimizu, M.4    Fuji, N.5    Oshitani, H.6
  • 13
    • 70349323515 scopus 로고    scopus 로고
    • Large-scale sequence analysis of M gene of influenza A viruses from different species: mechanisms for emergence and spread of amantadine resistance
    • Furuse Y., Suzuki A., Oshitani H. Large-scale sequence analysis of M gene of influenza A viruses from different species: mechanisms for emergence and spread of amantadine resistance. Antimicrob. Agents Chemother. 2009, 53(10):4457-4463.
    • (2009) Antimicrob. Agents Chemother. , vol.53 , Issue.10 , pp. 4457-4463
    • Furuse, Y.1    Suzuki, A.2    Oshitani, H.3
  • 14
    • 72849144584 scopus 로고    scopus 로고
    • Reassortment between amantadine-resistant and -sensitive H1N1 influenza A viruses generated an amantadine-sensitive virus during the 2007-2008 season
    • Furuse Y., Suzuki A., Shimizu M., Kishi M., Sawayama R., Saito M., Fuji N., Nukiwa N., Oshitani H. Reassortment between amantadine-resistant and -sensitive H1N1 influenza A viruses generated an amantadine-sensitive virus during the 2007-2008 season. J. Infect. Dis. 2009, 200(11):1766-1773.
    • (2009) J. Infect. Dis. , vol.200 , Issue.11 , pp. 1766-1773
    • Furuse, Y.1    Suzuki, A.2    Shimizu, M.3    Kishi, M.4    Sawayama, R.5    Saito, M.6    Fuji, N.7    Nukiwa, N.8    Oshitani, H.9
  • 18
    • 0023445054 scopus 로고
    • Genomic RNAs of influenza viruses are held in a circular conformation in virions and in infected cells by a terminal panhandle
    • Hsu M.T., Parvin J.D., Gupta S., Krystal M., Palese P. Genomic RNAs of influenza viruses are held in a circular conformation in virions and in infected cells by a terminal panhandle. Proc. Natl. Acad. Sci. U.S.A. 1987, 84(22):8140-8144.
    • (1987) Proc. Natl. Acad. Sci. U.S.A. , vol.84 , Issue.22 , pp. 8140-8144
    • Hsu, M.T.1    Parvin, J.D.2    Gupta, S.3    Krystal, M.4    Palese, P.5
  • 19
    • 56449098772 scopus 로고    scopus 로고
    • Mutational analysis of cis-acting RNA signals in segment 7 of influenza A virus
    • Hutchinson E.C., Curran M.D., Read E.K., Gog J.R., Digard P. Mutational analysis of cis-acting RNA signals in segment 7 of influenza A virus. J. Virol. 2008, 82(23):11869-11879.
    • (2008) J. Virol. , vol.82 , Issue.23 , pp. 11869-11879
    • Hutchinson, E.C.1    Curran, M.D.2    Read, E.K.3    Gog, J.R.4    Digard, P.5
  • 21
    • 70349970792 scopus 로고    scopus 로고
    • Characterisation of influenza A viruses with mutations in segment 5 packaging signals
    • Hutchinson E.C., Wise H.M., Kudryavtseva K., Curran M.D., Digard P. Characterisation of influenza A viruses with mutations in segment 5 packaging signals. Vaccine 2009, 27(45):6270-6275.
    • (2009) Vaccine , vol.27 , Issue.45 , pp. 6270-6275
    • Hutchinson, E.C.1    Wise, H.M.2    Kudryavtseva, K.3    Curran, M.D.4    Digard, P.5
  • 22
    • 44649136618 scopus 로고    scopus 로고
    • Genetically destined potentials for N-linked glycosylation of influenza virus hemagglutinin
    • Igarashi M., Ito K., Kida H., Takada A. Genetically destined potentials for N-linked glycosylation of influenza virus hemagglutinin. Virology 2008, 376(2):323-329.
    • (2008) Virology , vol.376 , Issue.2 , pp. 323-329
    • Igarashi, M.1    Ito, K.2    Kida, H.3    Takada, A.4
  • 23
    • 0014895698 scopus 로고
    • Replication and functions of myxovirus ribonucleic acids
    • Kingsbury D.W. Replication and functions of myxovirus ribonucleic acids. Prog. Med. Virol. 1970, 12:49-77.
    • (1970) Prog. Med. Virol. , vol.12 , pp. 49-77
    • Kingsbury, D.W.1
  • 25
    • 45949109669 scopus 로고    scopus 로고
    • MEGA: a biologist-centric software for evolutionary analysis of DNA and protein sequences
    • Kumar S., Nei M., Dudley J., Tamura K. MEGA: a biologist-centric software for evolutionary analysis of DNA and protein sequences. Brief. Bioinform. 2008, 9(4):299-306.
    • (2008) Brief. Bioinform. , vol.9 , Issue.4 , pp. 299-306
    • Kumar, S.1    Nei, M.2    Dudley, J.3    Tamura, K.4
  • 26
    • 0021277009 scopus 로고
    • A new method for calculating evolutionary substitution rates
    • Lanave C., Preparata G., Saccone C., Serio G. A new method for calculating evolutionary substitution rates. J. Mol. Evol. 1984, 20(1):86-93.
    • (1984) J. Mol. Evol. , vol.20 , Issue.1 , pp. 86-93
    • Lanave, C.1    Preparata, G.2    Saccone, C.3    Serio, G.4
  • 27
    • 0017286522 scopus 로고
    • Influenza virus recombination. I. Matrix protein markers and segregation during mixed infections
    • Laver W.G., Downie J.C. Influenza virus recombination. I. Matrix protein markers and segregation during mixed infections. Virology 1976, 70(1):105-117.
    • (1976) Virology , vol.70 , Issue.1 , pp. 105-117
    • Laver, W.G.1    Downie, J.C.2
  • 28
    • 0028084580 scopus 로고
    • Characterization of the polyadenylation signal of influenza virus RNA
    • Li X., Palese P. Characterization of the polyadenylation signal of influenza virus RNA. J. Virol. 1994, 68(2):1245-1249.
    • (1994) J. Virol. , vol.68 , Issue.2 , pp. 1245-1249
    • Li, X.1    Palese, P.2
  • 29
    • 35348814973 scopus 로고    scopus 로고
    • Specific residues of the influenza A virus hemagglutinin viral RNA are important for efficient packaging into budding virions
    • Marsh G.A., Hatami R., Palese P. Specific residues of the influenza A virus hemagglutinin viral RNA are important for efficient packaging into budding virions. J. Virol. 2007, 81(18):9727-9736.
    • (2007) J. Virol. , vol.81 , Issue.18 , pp. 9727-9736
    • Marsh, G.A.1    Hatami, R.2    Palese, P.3
  • 30
    • 39749119294 scopus 로고    scopus 로고
    • Highly conserved regions of influenza a virus polymerase gene segments are critical for efficient viral RNA packaging
    • Marsh G.A., Rabadan R., Levine A.J., Palese P. Highly conserved regions of influenza a virus polymerase gene segments are critical for efficient viral RNA packaging. J. Virol. 2008, 82(5):2295-2304.
    • (2008) J. Virol. , vol.82 , Issue.5 , pp. 2295-2304
    • Marsh, G.A.1    Rabadan, R.2    Levine, A.J.3    Palese, P.4
  • 31
    • 0033856695 scopus 로고    scopus 로고
    • Early alterations of the receptor-binding properties of H1, H2, and H3 avian influenza virus hemagglutinins after their introduction into mammals
    • Matrosovich M., Tuzikov A., Bovin N., Gambaryan A., Klimov A., Castrucci M.R., Donatelli I., Kawaoka Y. Early alterations of the receptor-binding properties of H1, H2, and H3 avian influenza virus hemagglutinins after their introduction into mammals. J. Virol. 2000, 74(18):8502-8512.
    • (2000) J. Virol. , vol.74 , Issue.18 , pp. 8502-8512
    • Matrosovich, M.1    Tuzikov, A.2    Bovin, N.3    Gambaryan, A.4    Klimov, A.5    Castrucci, M.R.6    Donatelli, I.7    Kawaoka, Y.8
  • 33
    • 0017697770 scopus 로고
    • Three-factor cross of influenza virus
    • Nakajima K., Sugiura A. Three-factor cross of influenza virus. Virology 1977, 81(2):486-489.
    • (1977) Virology , vol.81 , Issue.2 , pp. 486-489
    • Nakajima, K.1    Sugiura, A.2
  • 34
    • 63149096786 scopus 로고    scopus 로고
    • Nucleotide sequence requirements at the 5′ end of the influenza A virus M RNA segment for efficient virus replication
    • Ozawa M., Maeda J., Iwatsuki-Horimoto K., Watanabe S., Goto H., Horimoto T., Kawaoka Y. Nucleotide sequence requirements at the 5′ end of the influenza A virus M RNA segment for efficient virus replication. J. Virol. 2009.
    • (2009) J. Virol.
    • Ozawa, M.1    Maeda, J.2    Iwatsuki-Horimoto, K.3    Watanabe, S.4    Goto, H.5    Horimoto, T.6    Kawaoka, Y.7
  • 36
    • 15844406550 scopus 로고    scopus 로고
    • HyPhy: hypothesis testing using phylogenies
    • Pond S.L.K., Frost S.D.W., Muse S.V. HyPhy: hypothesis testing using phylogenies. Bioinformatics 2005, 21(5):676-679.
    • (2005) Bioinformatics , vol.21 , Issue.5 , pp. 676-679
    • Pond, S.L.K.1    Frost, S.D.W.2    Muse, S.V.3
  • 38
    • 0031883261 scopus 로고    scopus 로고
    • Polyadenylation of influenza virus mRNA transcribed in vitro from model virion RNA templates: requirement for 5′ conserved sequences
    • Pritlove D.C., Poon L.L., Fodor E., Sharps J., Brownlee G.G. Polyadenylation of influenza virus mRNA transcribed in vitro from model virion RNA templates: requirement for 5′ conserved sequences. J. Virol. 1998, 72(2):1280-1286.
    • (1998) J. Virol. , vol.72 , Issue.2 , pp. 1280-1286
    • Pritlove, D.C.1    Poon, L.L.2    Fodor, E.3    Sharps, J.4    Brownlee, G.G.5
  • 40
    • 0018674114 scopus 로고
    • 5′ and 3′ terminal nucleotide sequences of the RNA genome segments of influenza virus
    • Robertson J.S. 5′ and 3′ terminal nucleotide sequences of the RNA genome segments of influenza virus. Nucleic Acids Res. 1979, 6(12):3745-3757.
    • (1979) Nucleic Acids Res. , vol.6 , Issue.12 , pp. 3745-3757
    • Robertson, J.S.1
  • 42
    • 70849132797 scopus 로고    scopus 로고
    • Evolutionary trends of A(H1N1) influenza virus hemagglutinin since 1918
    • Shen J., Ma J., Wang Q. Evolutionary trends of A(H1N1) influenza virus hemagglutinin since 1918. PLoS One 2009, 4(11):e7789.
    • (2009) PLoS One , vol.4 , Issue.11
    • Shen, J.1    Ma, J.2    Wang, Q.3
  • 43
    • 34547553697 scopus 로고    scopus 로고
    • Simultaneous amino acid substitutions at antigenic sites drive influenza A hemagglutinin evolution
    • Shih A.C.-C., Hsiao T.-C., Ho M.-S., Li W.-H. Simultaneous amino acid substitutions at antigenic sites drive influenza A hemagglutinin evolution. Proc. Natl. Acad. Sci. U.S.A. 2007, 104(15):6283-6288.
    • (2007) Proc. Natl. Acad. Sci. U.S.A. , vol.104 , Issue.15 , pp. 6283-6288
    • Shih, A.C.-C.1    Hsiao, T.-C.2    Ho, M.-S.3    Li, W.-H.4
  • 44
    • 33748789595 scopus 로고    scopus 로고
    • Natural selection on the influenza virus genome
    • Suzuki Y. Natural selection on the influenza virus genome. Mol. Biol. Evol. 2006, 23(10):1902-1911.
    • (2006) Mol. Biol. Evol. , vol.23 , Issue.10 , pp. 1902-1911
    • Suzuki, Y.1
  • 45
    • 79952068189 scopus 로고    scopus 로고
    • Influenza A virus expresses high levels of an unusual class of small viral leader RNAs in infected cells
    • Umbach J.L., Yen H.L., Poon L.L., Cullen B.R. Influenza A virus expresses high levels of an unusual class of small viral leader RNAs in infected cells. MBio 2010, 1(4).
    • (2010) MBio , vol.1 , Issue.4
    • Umbach, J.L.1    Yen, H.L.2    Poon, L.L.3    Cullen, B.R.4
  • 47
    • 0029911606 scopus 로고    scopus 로고
    • Nonconserved nucleotides at the 3′ and 5′ ends of an influenza A virus RNA play an important role in viral RNA replication
    • Zheng H., Palese P., Garcia-Sastre A. Nonconserved nucleotides at the 3′ and 5′ ends of an influenza A virus RNA play an important role in viral RNA replication. Virology 1996, 217(1):242-251.
    • (1996) Virology , vol.217 , Issue.1 , pp. 242-251
    • Zheng, H.1    Palese, P.2    Garcia-Sastre, A.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.