Ambivalent effects of defective DNA in beet curly top virus-infected transgenic sugarbeet plants

Virus Research

Volumn 158, Issue 1-2, 2011, Pages 169-178

  Horn, J ^a   Lauster, S ^a   Krenz, B ^a   Kraus, J ^b   Frischmuth, T ^a,c   Jeske, H ^a  

^a UNIVERSITY OF STUTTGART   (Germany)

^b PLANTA Angewandte Pflanzengenetik und Biotechnologie GmbH   (Germany)

^c Baseclick GmbH   (Germany)

Author keywords

Beet curly top virus (BCTV); Beta vulgaris L. (sugarbeet); Defective DNA; Rolling circle amplification (RCA); Tolerance

Indexed keywords

VIRUS DNA;

ARTICLE; BEET; BEET CURLY TOP VIRUS; CONTROLLED STUDY; CORRELATION ANALYSIS; DISEASE SEVERITY; DNA DAMAGE; DNA DETERMINATION; GEMINIVIRUS; GENE AMPLIFICATION; GENE CONSTRUCT; NONHUMAN; NUCLEOTIDE SEQUENCE; PLANT DISEASE; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; RESTRICTION FRAGMENT LENGTH POLYMORPHISM; ROLLING CIRCLE AMPLIFICATION; SUGARBEET; TRANSGENIC PLANT; VIRUS GENOME;

BETA VULGARIS; DEFECTIVE VIRUSES; DNA, VIRAL; GEMINIVIRIDAE; GENOTYPE; NUCLEIC ACID AMPLIFICATION TECHNIQUES; PLANT DISEASES; PLANTS, GENETICALLY MODIFIED; POLYMORPHISM, RESTRICTION FRAGMENT LENGTH;

BEET CURLY TOP VIRUS; BETA VULGARIS;

EID: 79956322220     PISSN: 01681702     EISSN: 18727492     Source Type: Journal    
DOI: 10.1016/j.virusres.2011.03.029     Document Type: Article

References (60)

1. An G. High efficiency transformation of cultured tobacco cells. Plant Physiol. 1985, 79:568-570.
2. Aragao F.J., Faria J.C. First transgenic geminivirus-resistant plant in the field. Nat. Biotechnol. 2009, 27:1086-1088. (author reply 1088-1089).
3. Bennett C.W. Epidemiology of leafhopper-transmitted viruses. Annu. Rev. Phytopathol. 1967, 5:87-108.
4. Briddon R.W., Watts J., Markham P.G., Stanley J. The coat protein of beet curly top virus is essential for infectivity. Virology 1989, 172:628-633.
5. Casado C.G., Javier Ortiz G., Padron E., Bean S.J., McKenna R., Agbandje-McKenna M., Boulton M.I. Isolation and characterization of subgenomic DNAs encapsidated in "single" T=1 isometric particles of Maize streak virus. Virology 2004, 323:164-171.
6. Draycott A.P. Sugarbeet 2006, Wiley-Blackwell, Oxford. 1st ed.
7. Eagle P.A., Orozco B.M., Hanley-Bowdoin L. A DNA sequence required for geminivirus replication also mediates transcriptional regulation. Plant Cell 1994, 6:1157-1170.
8. Fauquet C.M., Briddon R.W., Brown J.K., Moriones E., Stanley J., Zerbini M., Zhou X. Geminivirus strain demarcation and nomenclature. Arch. Virol. 2008, 153:783-821.
9. Frischmuth T., Engel M., Jeske H. Beet curly top virus DI DNA-mediated resistance is linked to its size. Mol. Breed. 1997, 3:213-217.
10. Frischmuth T., Ringel M., Kocher C. The size of encapsidated single-stranded DNA determines the multiplicity of African cassava mosaic virus particles. J. Gen. Virol. 2001, 82:673-676.
11. Frischmuth T., Stanley J. African cassava mosaic virus DI-DNA interferes with the replication of both genomic components. Virology 1991, 183:808-811.
12. Frischmuth T., Stanley J. Characterization of beet curly top virus subgenomic DNA localizes sequences required for replication. Virology 1992, 189:808-811.
13. Frischmuth T., Stanley J. Beet curly top virus symptom amelioration in Nicotiana benthamiana transformed with a naturally occuring viral subgenomic DNA. Virology 1994, 200:826-830.
14. Gardner R.C., Knauf V.C. Transfer of Agrobacterium DNA to plants requires a T-DNA border but not the virE locus. Science 1986, 231:725-727.
15. Grimsley N., Hohn T., Davies J.W., Hohn B. Agrobacterium-mediated delivery of infectious maize streak virus into maize plants. Nature 1987, 325:177-179.
16. Haible D., Kober S., Jeske H. Rolling circle amplification revolutionizes diagnosis and genomics of geminiviruses. J. Virol. Methods 2006, 135:9-16.
17. Hennes-Stegmann B., Schroder C.H. Low infectivity of HSV-1 DNA caused by defective-interfering genomes. J. Gen. Virol. 1982, 63:307-314.
18. Homs M., Kober S., Kepp G., Jeske H. Mitochondrial plasmids of sugarbeet amplified via rolling circle method detected during curtovirus screening. Virus Res. 2008, 136:124-129.
19. Hormuzdi S.G., Bisaro D.M. Genetic analysis of beet curly top virus - evidence for 3 virion sense genes involved in movement and regulation of single-stranded and double-stranded DNA levels. Virology 1993, 193:900-909.
20. Hull R. Matthews' Plant Virology 2002, Academic Press, San Diego. 4th ed.
21. Inoue-Nagata A.K., Albuquerque L.C., Rocha W.B., Nagata T. A simple method for cloning the complete begomovirus genome using the bacteriophage phi29 DNA polymerase. J. Virol. Methods 2004, 116:209-211.
22. Jeske H. Replication of geminiviruses and the use of rolling circle amplification for their diagnosis. Tomato Yellow Leaf Curl Virus Disease 2007, 141-156. Springer, Dordrecht. H. Czosnek (Ed.).
23. Jeske H. Geminiviruses. Current Topics in Microbiology and Immunology 2009, vol. 331:185-226. Springer, Berlin. H. zur Hausen, E.-M. de Villiers (Eds.).
24. Jeske H., Lütgemeier M., Preiss W. Distinct DNA forms indicate rolling circle and recombination-dependent replication of Abutilon mosaic geminivirus. EMBO J. 2001, 20:6158-6167.
25. Klute K.A., Nadler S.A., Stenger D.C. Horseradish curly top virus is a distinct subgroup II geminivirus species with rep and C4 genes derived from a subgroup III ancestor. J. Gen. Virol. 1996, 77:1369-1378.
26. Lai J., Chen H., Teng K., Zhao Q., Zhang Z., Li Y., Liang L., Xia R., Wu Y., Guo H., Xie Q. RKP, a RING finger E3 ligase induced by BSCTV C4 protein, affects geminivirus infection by regulation of the plant cell cycle. Plant J. 2009, 57:905-917.
27. Lam N., Creamer R., Rascon J., Belfon R. Characterization of a new curtovirus Pepper yellow dwarf virus, from chile pepper and distribution in weed hosts in New Mexico. Arch. Virol. 2009, 154:429-436.
28. Larsen R.C., Miklas P.N. Generation and molecular mapping of a sequence characterized amplified region marker linked with the bct gene for resistance to Beet curly top virus in common bean. Phytopathology 2004, 94:320-325.
29. Latham J.R., Saunders K., Pinner M.S., Stanley J. Induction of plant cell division by beet curly top virus gene C4. Plant J. 1997, 11:1273-1283.
30. Laufs J., Traut W., Heyraud F., Matzeit V., Rogers S.G., Schell J., Gronenborn B. In vitro cleavage and joining at the viral origin of replication by the replication initiator protein of tomato yellow leaf curl virus. Proc. Natl. Acad. Sci. U.S.A. 1995, 92:3879-3883.
31. Lauster, S., 2000. Untersuchung DI-DNA vermittelter Resistenz gegen Beet Curly Top Geminivirus (BCTV) in Zuckerrübe und Suche nach neuen Virusvarianten im Anbaugebiet Idaho, USA, Dissertation, Stuttgart, Stuttgart. http://elib.uni-stuttgart.de/opus/volltexte/2000/626/.
32. Lee S., Stenger D.C., Bisaro D.M., Davis K.R. Identification of loci in Arabidopsis that confer resistance to geminivirus infection. Plant J. 1994, 6:525-535.
33. Lindsey K., Gallois P. Transformation of sugarbeet (Beta vulgaris) by Agrobacterium tumefaciens. J. Exp. Bot. 1990, 41:529-536.
34. Lucioli A., Sallustio D.E., Barboni D., Berardi A., Papacchioli V., Tavazza R., Tavazza M. A cautionary note on pathogen-derived sequences. Nat. Biotechnol. 2008, 26:617-619.
35. MacDowell S.W., Coutts R.H.A., Buck K.W. Molecular characterization of subgenomic single-stranded and double-stranded DNA forms from plants infected with tomato golden mosaic virus. Nucleic Acids Res. 1986, 14:7967-7984.
36. Mills-Lujan K., Deom C.M. Geminivirus C4 protein alters Arabidopsis development. Protoplasma 2010, 239:95-110.
37. Moffat A. Geminiviruses emerge as serious crop threat. Science 1999, 286:1835.
38. Owor B.E., Shepherd D.N., Taylor N.J., Edema R., Monjane A.L., Thomson J.A., Martin D.P., Varsani A. Successful application of FTA Classic Card technology and use of bacteriophage phi29 DNA polymerase for large-scale field sampling and cloning of complete maize streak virus genomes. J. Virol. Methods 2007, 140:100-105.
39. Paprotka T., Boiteux L.S., Fonseca M.E., Resende R.O., Jeske H., Faria J.C., Ribeiro S.G. Genomic diversity of sweet potato geminiviruses in a Brazilian germplasm bank. Virus Res. 2010, 149:224-233.
40. Paprotka T., Metzler V., Jeske H. The complete nucleotide sequence of a new bipartite begomovirus from Brazil infecting Abutilon. Arch. Virol. 2010, 155:813-816.
41. Paprotka T., Metzler V., Jeske H. The first DNA 1-like alpha-satellites in association with New World begomoviruses in natural infections. Virology 2010, 404:148-157.
42. Patil B.L., Dasgupta I. Defective interfering DNAs of plant viruses. Crit. Rev. Plant Sci. 2006, 24:1-18.
43. Patil B.L., Dutt N., Briddon R.W., Bull S.E., Rothenstein D., Borah B.K., Dasgupta I., Jeske H. Deletion and recombination events between DNA A and DNA B generate defective molecules in Indian cassava-infecting geminiviruses. Virus Res. 2007, 124:59-67.
44. Permingeat H.R., Romagnoli M.V. A simple method for isolating high yield and quality DNA from cotton (Gossypium hirsutum L.) leaves. Plant Mol. Biol. Rep. 1998, 16:1-6.
45. Piroux N., Saunders K., Page A., Stanley J. Geminivirus pathogenicity protein C4 interacts with Arabidopsis thaliana shaggy-related protein kinase AtSKeta, a component of the brassinosteroid signalling pathway. Virology 2007, 362:428-440.
46. Rogers S.G., Bisaro D.M., Horsch R.B., Fraley R.T., Hoffmann N.L., Brand L., Elmer J.S., Lloyd A.M. Tomato golden mosaic A component DNA replicates autonomously in transgenic plants. Cell 1986, 45:593-600.
47. Roossinck M.J., Sleat D., Palukaitis P. Satellite RNAs of plant viruses: structures and biological effects. Microbiol. Rev. 1992, 56:265-279.
48. Sambrook J., Russell D.W. Molecular Cloning: A Laboratory Manual 2001, Cold Spring Harbor Press, Cold Spring Harbor, NY. 3rd ed.
49. Sera T. Inhibition of virus DNA replication by artificial zinc finger proteins. J. Virol. 2005, 79:2614-2619.
50. Song J.Y., Jeske H. The level of Abutilon mosaic geminivirus in leaf discs and wound callus. J. Phytopathol. 1994, 140:45-52.
51. Stanley J., Bisaro D.M., Briddon R.W., Brown J.K., Fauquet C.M., Harrison B.D., Rybicki E.P., Stenger D.C. Geminiviridae. Virus Taxonomy. VIIIth Report of the International Committee on Taxonomy of Viruses 2005, 301-326. Elsevier/Academic Press, London. C.M. Fauquet, M.A. Mayo, J. Maniloff, U. Desselberger, L.A. Ball (Eds.).
52. Stanley J., Frischmuth T., Ellwood S. Defective viral DNA ameliorates symptoms of geminivirus infection in transgenic plants. Proc. Natl. Acad. Sci. U.S.A. 1990, 87:6291-6295.
53. Stanley J., Latham J.R. A symptom variant of beet curly top geminivirus produced by mutation of open reading frame C4. Virology 1992, 190:506-509.
54. Stanley J., Markham P.G., Callis R.J., Pinner M.S. The nucleotide sequence of an infectious clone of the geminivirus beet curly top virus. EMBO J. 1986, 5:1761-1767.
55. Stanley J., Townsend R. Characterisation of DNA forms associated with cassava latent virus infection. Nucleic Acids Res. 1985, 13:2189-2206.
56. Stenger D.C. Strain-specific mobilization and amplification of a transgenic defective-interfering DNA of the geminivirus Beet curly top virus. Virology 1994, 203:397-402.
57. Thomas C.M. The nucleotide sequence and transcription of minicircular mitochondrial DNA's associated with male-fertile and cytoplasmic male-sterile lines of sugarbeet. Nucleic Acids Res. 1986, 14:9353-9370.
58. Wisler G.C., Duffus J.E. A century of plant virus management in the Salinas Valley of California, 'East of Eden'. Virus Res. 2000, 71:161-169.
59. Yazdi H.R., Heydarnejad J., Massumi H. Genome characterization and genetic diversity of Beet curly top Iran virus: a geminivirus with a novel nonanucleotide. Virus Genes 2008, 36:539-545.
60. Yuan T.T., Lin M.H., Chen D.S., Shih C. A defective interference-like phenomenon of human Hepatitis B virus in chronic carriers. J. Virol. 1998, 72:578-584.