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Volumn 34, Issue 5, 2011, Pages 581-595

Some aspects of the anemia of chronic disorders modeled and analyzed by petri net based approach

Author keywords

Hepcidin; Inflammation; Iron; Modeling; Petri net theory

Indexed keywords

CLINICAL RESEARCH; IRON; MODELS; PATHOLOGY; PETRI NETS;

EID: 79956189812     PISSN: 16157591     EISSN: 16157605     Source Type: Journal    
DOI: 10.1007/s00449-010-0507-6     Document Type: Article
Times cited : (21)

References (39)
  • 1
    • 2042546096 scopus 로고    scopus 로고
    • Balancing acts: Molecular control of mammalian iron metabolism
    • DOI 10.1016/S0092-8674(04)00343-5, PII S0092867404003435
    • MW Hentze MU Muckenthaler NC Andrews 2004 Balancing acts: molecular control of mammalian iron metabolism Cell 117 285 297 10.1016/S0092-8674(04) 00343-5 1:CAS:528:DC%2BD2cXjvFemsbg%3D (Pubitemid 38534536)
    • (2004) Cell , vol.117 , Issue.3 , pp. 285-297
    • Hentze, M.W.1    Muckenthaler, M.U.2    Andrews, N.C.3
  • 2
    • 0036055515 scopus 로고    scopus 로고
    • Immunological basis of inflammation in dialysis
    • A Amore R Coppo 2002 Immunological basis of inflammation in dialysis Nephrol Dial Transpl 17 16 24 10.1093/ndt/17.suppl-8.16 1:CAS:528: DC%2BD38XnsVCntr8%3D (Pubitemid 34918874)
    • (2002) Nephrology Dialysis Transplantation , vol.17 , Issue.SUPPL. 8 , pp. 16-24
    • Amore, A.1    Coppo, R.2
  • 3
    • 28944454784 scopus 로고    scopus 로고
    • Hyporesponsiveness to erythropoietic therapy due to chronic inflammation
    • IC Macdougall AC Cooper 2005 Hyporesponsiveness to erythropoietic therapy due to chronic inflammation Eur J Clin Invest 35 32 35 10.1111/j.1365-2362. 2005.01528.x 1:CAS:528:DC%2BD28XmsFejtQ%3D%3D (Pubitemid 41783602)
    • (2005) European Journal of Clinical Investigation, Supplement , vol.35 , Issue.3 , pp. 32-35
    • Macdougall, I.C.1    Cooper, A.C.2
  • 4
    • 0036315869 scopus 로고    scopus 로고
    • Anaemia, rHuEPO resistance, and cardiovascular disease in end-stage renal failure: Links to inflammation and oxidative stress
    • P Stenvinkel P Bárány 2002 Anemia, rHuEPO resistance, and cardiovascular disease in end-stage renal failure: links to inflammation and oxidative stress Nephrol Dial Transpl 17 32 37 10.1093/ndt/17.suppl-5.32 1:CAS:528:DC%2BD38XmsFagur0%3D (Pubitemid 34823070)
    • (2002) Nephrology Dialysis Transplantation , vol.17 , Issue.SUPPL. 5 , pp. 32-37
    • Stenvinkel, P.1    Barany, P.2
  • 5
    • 0032915659 scopus 로고    scopus 로고
    • Erythropoietin hyporesponsiveness: From iron deficiency to iron overload
    • 10.1046/j.1523-1755.1999.055Suppl.69107.x
    • DC Tarng TP Huang TW Chen WC Yang 1999 Erythropoietin hyporesponsiveness: from iron deficiency to iron overload Kidney Int 69 107 118 10.1046/j.1523-1755.1999.055Suppl.69107.x
    • (1999) Kidney Int , vol.69 , pp. 107-118
    • Tarng, D.C.1    Huang, T.P.2    Chen, T.W.3    Yang, W.C.4
  • 6
    • 84874258164 scopus 로고
    • Communication with automata (in German)
    • Institut für Instrumentelle Mathematik, Bonn
    • Petri CA. (1962) Communication with automata (in German). Schriften des IIM Nr. 3, Institut für Instrumentelle Mathematik, Bonn
    • (1962) Schriften des IIM Nr. 3
    • Petri, C.A.1
  • 9
    • 0345096675 scopus 로고    scopus 로고
    • Steady state analysis of metabolic pathways using Petri nets
    • K Voss M Heiner I Koch 2003 Steady state analysis of metabolic pathways using Petri nets In Silico Biol 3 367 387 1:CAS:528:DC%2BD3sXovFCqurY%3D (Pubitemid 37498172)
    • (2003) Silico Biology , vol.3 , Issue.3 , pp. 367-387
    • Voss, K.1    Heiner, M.2    Koch, I.3
  • 10
    • 10044242838 scopus 로고    scopus 로고
    • Constructing biological pathway models with hybrid functional Petri Nets
    • A Doi S Fujita H Matsuno M Nagasaki S Miyano 2004 Constructing biological pathway models with hybrid functional Petri nets In Silico Biol 4 271 291 1:CAS:528:DC%2BD2cXhtVahsLbF (Pubitemid 39600476)
    • (2004) Silico Biology , vol.4 , Issue.3 , pp. 271-291
    • Doi, A.1    Fujita, S.2    Matsuno, H.3    Nagasaki, M.4    Miyano, S.5
  • 11
    • 34548302044 scopus 로고    scopus 로고
    • Petri net modelling of biological networks
    • DOI 10.1093/bib/bbm029, Integrative Biology
    • C Chaouiya 2007 Petri net modelling of biological networks Brief Bioinform 8 210 219 10.1093/bib/bbm029 1:CAS:528:DC%2BD2sXhtFGgsb3J (Pubitemid 47336806)
    • (2007) Briefings in Bioinformatics , vol.8 , Issue.4 , pp. 210-219
    • Chaouiya, C.1
  • 12
    • 10944237281 scopus 로고    scopus 로고
    • RuleMiner: A knowledge system for supporting high-throughput protein function annotations
    • DOI 10.1142/S0219720004000752, PII S0219720004000752
    • S Hardy PN Robillard 2004 Modeling and simulation of molecular biology systems using Petri nets: modeling goals of various approaches J Bioinform Computat Biol 2 595 613 10.1142/S0219720004000752 1:CAS:528:DC%2BD2MXpsFWgsLk%3D (Pubitemid 40017357)
    • (2004) Journal of Bioinformatics and Computational Biology , vol.2 , Issue.4 , pp. 595-617
    • Yu, G.-X.1
  • 14
    • 0345170900 scopus 로고    scopus 로고
    • Biopathways representation and simulation on hybrid functional Petri Net
    • H Matsuno Y Tanaka H Aoshima A Doi M Matsui S Miyano 2003 Biopathways representation and simulation on hybrid functional Petri net In Silico Biol 3 389 404 1:CAS:528:DC%2BD3sXovFCqurc%3D (Pubitemid 37493057)
    • (2003) Silico Biology , vol.3 , Issue.3 , pp. 389-404
    • Matsuno, H.1    Tanaka, Y.2    Aoshima, H.3    Doi, A.4    Matsui, M.5    Miyano, S.6
  • 16
    • 0024645936 scopus 로고
    • Petri nets: Properties, analysis and applications
    • 10.1109/5.24143
    • T Murata 1989 Petri nets: properties, analysis and applications Proc IEEE 77 541 580 10.1109/5.24143
    • (1989) Proc IEEE , vol.77 , pp. 541-580
    • Murata, T.1
  • 17
    • 33845417184 scopus 로고    scopus 로고
    • Application of Petri net based analysis techniques to signal transduction pathways
    • DOI 10.1186/1471-2105-7-482
    • A Sackmann M Heiner I Koch 2006 Application of Petri net based analysis techniques to signal transduction pathways BMC Bioinform 7 482 10.1186/1471-2105-7-482 (Pubitemid 44889534)
    • (2006) BMC Bioinformatics , vol.7 , pp. 482
    • Sackmann, A.1    Heiner, M.2    Koch, I.3
  • 18
    • 33846851564 scopus 로고    scopus 로고
    • An analysis of the Petri net based model of the human body iron homeostasis process
    • DOI 10.1016/j.compbiolchem.2006.09.005, PII S1476927106000892
    • A Sackmann D Formanowicz P Formanowicz I Koch J Błazewicz 2007 An analysis of the Petri net based model of the human body iron homeostasis process Comput Biol Chem 31 1 10 10.1016/j.compbiolchem.2006.09.005 1:CAS:528:DC%2BD2sXhvVOktr4%3D (Pubitemid 46228083)
    • (2007) Computational Biology and Chemistry , vol.31 , Issue.1 , pp. 1-10
    • Sackmann, A.1    Formanowicz, D.2    Formanowicz, P.3    Koch, I.4    Blazewicz, J.5
  • 19
    • 34548218237 scopus 로고    scopus 로고
    • Petri net based model of the body iron homeostasis
    • 10.1016/j.jbi.2006.12.001
    • D Formanowicz A Sackmann P Formanowicz J Blazewicz 2006 Petri net based model of the body iron homeostasis J Biomed Inform 40 476 485 10.1016/j.jbi.2006.12.001
    • (2006) J Biomed Inform , vol.40 , pp. 476-485
    • Formanowicz, D.1    Sackmann, A.2    Formanowicz, P.3    Blazewicz, J.4
  • 20
    • 67349167070 scopus 로고    scopus 로고
    • Modeling the process of human body iron homeostasis using a variant of timed Petri nets
    • 10.1016/j.dam.2008.06.053
    • J Błazewicz D Formanowicz P Formanowicz A Sackmann M Sajkowski 2009 Modeling the process of human body iron homeostasis using a variant of timed Petri nets Discrete Appl Math 157 2221 2231 10.1016/j.dam.2008.06.053
    • (2009) Discrete Appl Math , vol.157 , pp. 2221-2231
    • Błazewicz, J.1    Formanowicz, D.2    Formanowicz, P.3    Sackmann, A.4    Sajkowski, M.5
  • 21
    • 0027055150 scopus 로고
    • Bacterial transferrin receptors - Structure, function and contribution to virulence
    • P Williams E Griffiths 1992 Bacterial transferrin receptors-structure, function and contribution to virulence Med Microbiol Immun 181 301 322 10.1007/BF00191543 1:CAS:528:DyaK2cXht12is78%3D (Pubitemid 23030439)
    • (1992) Medical Microbiology and Immunology , vol.181 , Issue.6 , pp. 301-322
    • Williams, P.1    Griffiths, E.2
  • 23
    • 1342263728 scopus 로고    scopus 로고
    • Hepcidin: A molecular link between inflammation and anaemia
    • DOI 10.1093/ndt/gfg560
    • R Deicher WH Horl 2004 Hepcidin: a molecular link between inflammation and anaemia Nephrol Dial Transpl 19 521 524 10.1093/ndt/gfg560 1:CAS:528:DC%2BD2cXhtVKrt7Y%3D (Pubitemid 38263104)
    • (2004) Nephrology Dialysis Transplantation , vol.19 , Issue.3 , pp. 521-524
    • Deicher, R.1    Horl, W.H.2
  • 24
    • 10844258104 scopus 로고    scopus 로고
    • Hepcidin regulates cellular iron efflux by binding to ferroportin and inducing its internalization
    • DOI 10.1126/science.1104742
    • E Nemeth M Tuttle J Powelson M Vaughn A Donovan D Ward T Ganz J Kaplan 2004 Hepcidin regulates cellular iron efflux by binding to ferroportin and inducing its internalization Science 306 2090 2093 10.1126/science.1104742 1:CAS:528:DC%2BD2cXhtVOjsL3K (Pubitemid 40007660)
    • (2004) Science , vol.306 , Issue.5704 , pp. 2090-2093
    • Nemeth, E.1    Tuttle, M.S.2    Powelson, J.3    Vaughn, M.D.4    Donovan, A.5    Ward, D.M.6    Ganz, T.7    Kaplan, J.8
  • 25
    • 0037962795 scopus 로고    scopus 로고
    • The orchestration of body iron intake: How and where do enterocytes receive their cues?
    • DOI 10.1016/S1079-9796(03)00039-1
    • DM Frazer GJ Anderson 2003 The orchestration of body iron intake: how and where do enterocytes receive their cues? Blood Cells Mol Dis 30 288 297 10.1016/S1079-9796(03)00039-1 1:CAS:528:DC%2BD3sXjsVGmtrs%3D (Pubitemid 36539430)
    • (2003) Blood Cells, Molecules, and Diseases , vol.30 , Issue.3 , pp. 288-297
    • Frazer, D.M.1    Anderson, G.J.2
  • 27
    • 61349112009 scopus 로고    scopus 로고
    • New insights into the human body iron metabolism analysed by a Petri net based approach
    • 10.1016/j.biosystems.2008.12.003 1:CAS:528:DC%2BD1MXisl2ku7Y%3D
    • A Sackmann D Formanowicz P Formanowicz J Błazewicz 2009 New insights into the human body iron metabolism analysed by a Petri net based approach Biosystems 96 104 113 10.1016/j.biosystems.2008.12.003 1:CAS:528:DC%2BD1MXisl2ku7Y%3D
    • (2009) Biosystems , vol.96 , pp. 104-113
    • Sackmann, A.1    Formanowicz, D.2    Formanowicz, P.3    Błazewicz, J.4
  • 28
    • 3042699469 scopus 로고    scopus 로고
    • Model validation of biological pathways using Petri nets - Demonstrated for apoptosis
    • DOI 10.1016/j.biosystems.2004.03.003, PII S030326470400036X
    • M Heiner I Koch J Will 2004 Model validation of biological pathways using Petri nets-demonstrated for apoptosis Biosystems 75 15 28 10.1016/j.biosystems. 2004.03.003 (Pubitemid 38887549)
    • (2004) BioSystems , vol.75 , Issue.1-3 , pp. 15-28
    • Heiner, M.1    Koch, I.2    Will, J.3
  • 30
    • 61349179156 scopus 로고    scopus 로고
    • The diagnostic value of soluble transferrin receptor in haemodialysed patients
    • D Formanowicz I Pietrzak 2006 The diagnostic value of soluble transferrin receptor in haemodialysed patients Nowiny Lekarskie 75 421 425
    • (2006) Nowiny Lekarskie , vol.75 , pp. 421-425
    • Formanowicz, D.1    Pietrzak, I.2
  • 31
    • 0036847340 scopus 로고    scopus 로고
    • Serum soluble transferrin receptor reflects erythropoiesis but not iron availability in erythropoietin-treated chronic hemodialysis patients
    • 1:STN:280:DC%2BD38nmsVyrug%3D%3D
    • WC Chiang TJ Tsai YM Chen SL Lin BS Hsieh 2002 Serum soluble transferrin receptor reflects erythropoiesis but not iron availability in erythropoietin-treated chronic hemodialysis patients Clin Nephrol 58 363 369 1:STN:280:DC%2BD38nmsVyrug%3D%3D
    • (2002) Clin Nephrol , vol.58 , pp. 363-369
    • Chiang, W.C.1    Tsai, T.J.2    Chen, Y.M.3    Lin, S.L.4    Hsieh, B.S.5
  • 32
    • 0025134007 scopus 로고
    • Intact transferrin receptors in human plasma and their relation to erythropoiesis
    • HA Huebers Y Beguin P Pootrakul D Einspahr CA Finch 1990 Intact transferrin receptors in human plasma and their relation to erythropoiesis Blood 75 102 107 1:CAS:528:DyaK3cXlt12gsg%3D%3D (Pubitemid 20031496)
    • (1990) Blood , vol.75 , Issue.1 , pp. 102-107
    • Huebers, H.A.1    Beguin, Y.2    Pootrakul, P.3    Einspahr, D.4    Finch, C.A.5
  • 33
    • 0022547495 scopus 로고
    • Circulating transferrin receptor in human serum
    • Y Kohgo T Nishisato H Kondo N Tsushima Y Nitsu I Urushizaki 1986 Circulating transferrin receptor in human serum Brit J Haematol 64 277 281 10.1111/j.1365-2141.1986.tb04120.x 1:STN:280:DyaL2s%2FkvFGhuw%3D%3D (Pubitemid 16007294)
    • (1986) British Journal of Haematology , vol.64 , Issue.2 , pp. 277-281
    • Kohgo, Y.1    Nishisato, T.2    Kondo, H.3
  • 34
    • 0034872976 scopus 로고    scopus 로고
    • Acute effect of human recombinant erythropoietin administration on soluble transferrin receptor [4]
    • DOI 10.1159/000046057
    • T Nakanishi R Moriguchi R Itahana Y Otaki T Inoue Y Takamitsu 2001 Acute effects of human recombinant erythropoietin administration on soluble transferrin receptor Nephron 89 119 120 10.1159/000046057 1:CAS:528: DC%2BD3MXnt1WgtLY%3D (Pubitemid 32799847)
    • (2001) Nephron , vol.89 , Issue.1 , pp. 119-120
    • Nakanishi, T.1    Moriguchi, R.2    Itahana, R.3    Otaki, Y.4    Inoue, T.5    Takamitsu, Y.6
  • 35
    • 0030846076 scopus 로고    scopus 로고
    • Markers of masked iron deficiency and effectiveness of EPO therapy in chronic renal failure
    • N Ahluwalia BS Skikne V Savin A Chonko 1997 Markers of masked iron deficiency and effectiveness of EPO therapy in chronic renal failure Am J Kidney Dis 30 532 541 10.1016/S0272-6386(97)90313-9 1:CAS:528:DyaK2sXmslOqtLs%3D (Pubitemid 27422301)
    • (1997) American Journal of Kidney Diseases , vol.30 , Issue.4 , pp. 532-541
    • Ahluwalia, N.1    Skikne, B.S.2    Savin, V.3    Chonko, A.4
  • 36
    • 0033561479 scopus 로고    scopus 로고
    • Erythropoietin modulates intracellular calcium in a human neuroblastoma cell line
    • DOI 10.1111/j.1469-7793.1999.0343v.x
    • R Assandri M Egger M Gassmann E Niggli C Bauer I Forstler A Gorlach 1999 Erythropoietin modulates intracellular calcium in a human neuroblastoma cell line J Physiol 516 343 352 10.1111/j.1469-7793.1999.0343v.x 1:CAS:528: DyaK1MXjtVKru7s%3D (Pubitemid 29204440)
    • (1999) Journal of Physiology , vol.516 , Issue.2 , pp. 343-352
    • Assandri, R.1    Egger, M.2    Gassmann, M.3    Niggli, E.4    Bauer, C.5    Forster, I.6    Gorlach, A.7
  • 37
    • 29644442986 scopus 로고    scopus 로고
    • Serum transferrin receptor is a good index of erythropoietin treatment in ESRD
    • 1:CAS:528:DyaK1cXmtFKjs7s%3D
    • CH Chen CH Cheng TC Cheng KH Shu MJ Wu JD Lian 1998 Serum transferrin receptor is a good index of erythropoietin treatment in ESRD Acta Nephrol 12 7 11 1:CAS:528:DyaK1cXmtFKjs7s%3D
    • (1998) Acta Nephrol , vol.12 , pp. 7-11
    • Chen, C.H.1    Cheng, C.H.2    Cheng, T.C.3    Shu, K.H.4    Wu, M.J.5    Lian, J.D.6
  • 38
    • 0034740704 scopus 로고    scopus 로고
    • Serum erythropoietin and its relation with soluble transferrin receptor in patients with different types of anaemia in a locally defined reference population
    • DOI 10.1046/j.1365-2257.2001.00413.x
    • ME Roque MJ Sandoval MC Aggio 2001 Serum erythropoietin and its relation with soluble transferrin receptor in patients with different types of anaemia in a locally defined reference population Clin Lab Haematol 23 291 295 10.1046/j.1365-2257.2001.00413.x 1:STN:280:DC%2BD3MnltFyjuw%3D%3D (Pubitemid 32995157)
    • (2001) Clinical and Laboratory Haematology , vol.23 , Issue.5 , pp. 291-295
    • Roque, M.E.1    Sandoval, M.J.2    Aggio, M.C.3


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