메뉴 건너뛰기




Volumn 50, Issue 19, 2011, Pages 4132-4142

Presence of divalent cation is not mandatory for the formation of intramolecular purine-motif triplex containing human c-jun protooncogene target

Author keywords

[No Author keywords available]

Indexed keywords

CD SPECTRA; CIRCULAR DICHROISM; DIVALENT CATION; DNA CONFORMATIONS; DOUBLE-HELICAL; ENDOGENOUS GENES; GEL ELECTROPHORESIS; GENE REGULATIONS; HAIRPIN FORMATION; MELTING CURVES; NEUTRAL PH; ONE STEP; PHYSIOLOGICAL CONDITION; STABLE TRIPLEX; THERMAL STABILITY; TRIPLE HELIXES; TRIPLE-HELIX FORMATION; TRIPLEX FORMATION;

EID: 79955824412     PISSN: 00062960     EISSN: 15204995     Source Type: Journal    
DOI: 10.1021/bi1012589     Document Type: Article
Times cited : (14)

References (80)
  • 1
    • 33947470407 scopus 로고
    • Formation of a three-stranded polynucleotide molecule
    • Felsenfeld, G., Davies, D. R., and Rich, A. (1957) Formation of a three-stranded polynucleotide molecule J. Am. Chem. Soc. 79, 2023-2024
    • (1957) J. Am. Chem. Soc. , vol.79 , pp. 2023-2024
    • Felsenfeld, G.1    Davies, D.R.2    Rich, A.3
  • 2
    • 33748577758 scopus 로고
    • Sequence-specific recognition and modification of double-helical DNA
    • Thuong, N. T. and Helene, C (1993) Sequence-specific recognition and modification of double-helical DNA Angew. Chem., Int. Ed. Engl. 32, 666-690
    • (1993) Angew. Chem., Int. Ed. Engl. , vol.32 , pp. 666-690
    • Thuong, N.T.1    Helene, C.2
  • 4
    • 0027197574 scopus 로고
    • Oligonucleotide-directed triple-helix formation
    • Sun, J. S. and Helene, C. (1993) Oligonucleotide-directed triple-helix formation Curr. Opin. Struct. Biol. 3, 345-356 (Pubitemid 23207565)
    • (1993) Current Opinion in Structural Biology , vol.3 , Issue.3 , pp. 345-356
    • Sun, J.-S.1    Helene, C.2
  • 5
    • 0028961984 scopus 로고
    • Prediction of pH dependent properties of DNA triple helices
    • Husler, P. L. and Klump, H. H. (1995) Prediction of pH dependent properties of DNA triple helices Arch. Biochem. Biophys. 317, 46-56
    • (1995) Arch. Biochem. Biophys. , vol.317 , pp. 46-56
    • Husler, P.L.1    Klump, H.H.2
  • 7
    • 0032488878 scopus 로고    scopus 로고
    • The contribution of cytosine protonation to the stability of parallel DNA triple helices
    • DOI 10.1006/jmbi.1997.1520
    • Asensio, J. L., Lane, A. N., Dhesi, J., Bergqvist, S., and Brown, T. (1998) The contribution of cytosine protonation to the stability of parallel DNA triple helices J. Mol. Biol. 275, 811-822 (Pubitemid 28077698)
    • (1998) Journal of Molecular Biology , vol.275 , Issue.5 , pp. 811-822
    • Asensio, J.L.1    Lane, A.N.2    Dhesi, J.3    Bergqvist, S.4    Brown, T.5
  • 8
    • 0021769970 scopus 로고
    • Poly(pyrimidine).poly(purine) synthetic DNAs containing 5-methyl cytosines form stable triplexes at neutral pH
    • Lee, J. S., Woodsworth, M. L., Latimer, L. J., and Morgan, A. R. (1984) Poly(pyrimidine).poly(purine) synthetic DNAs containing 5-methyl cytosines form stable triplexes at neutral pH Nucleic Acids Res. 12, 6603-6614
    • (1984) Nucleic Acids Res. , vol.12 , pp. 6603-6614
    • Lee, J.S.1    Woodsworth, M.L.2    Latimer, L.J.3    Morgan, A.R.4
  • 10
    • 0033990354 scopus 로고    scopus 로고
    • Design of antisense and triplex-forming oligonucleotides
    • DOI 10.1016/S0076-6879(00)13006-X
    • Francois, J. S., Lacoste, J., Lacroix, J., and Mergny, J. L. (2000) Design of antisense and triplex forming oligonucleotides Methods Enzymol. 313, 74-95 (Pubitemid 29506412)
    • (2000) Methods in Enzymology , vol.313 , pp. 74-95
    • Francois, J.-C.1    Lacoste, J.2    Lacroix, L.3    Mergny, J.-L.4
  • 11
    • 0026347779 scopus 로고
    • Extension of the range of recognition sequences for triple helix formation by oligonucleotides containing guanines and thymines
    • Sun, J. S., De-Bizemont, T., Duval-Valentin, G., Montenay-Garestier, T., and Helene, C. (1991) Extension of the range of recognition sequences for triple helix formation by oligonucleotides containing guanines and thymines C. R. Acad. Sci. III 313, 585-590
    • (1991) C. R. Acad. Sci. III , vol.313 , pp. 585-590
    • Sun, J.S.1    De-Bizemont, T.2    Duval-Valentin, G.3    Montenay-Garestier, T.4    Helene, C.5
  • 13
    • 0344033606 scopus 로고    scopus 로고
    • Recent improvements in antigene technology
    • DOI 10.1016/j.cbpa.2003.10.007
    • Buchini, S. and Leumann, C. J. (2003) Recent improvements in antigene technology Curr. Opin. Chem. Biol. 7, 717-726 (Pubitemid 37486116)
    • (2003) Current Opinion in Chemical Biology , vol.7 , Issue.6 , pp. 717-726
    • Buchini, S.1    Leumann, C.J.2
  • 15
    • 0023951264 scopus 로고
    • Magnesium ion-dependent triple-helix structure formed by homopurine-homopyrimidine sequences in supercoiled plasmid DNA
    • Kohwi, Y. and Kohwi-Shigematsu, T. (1988) Magnesium ion-dependent triple-helix structure formed by homopurine-homopyrimidine sequences in supercoiled plasmid DNA Proc. Natl. Acad. Sci. U.S.A. 85, 3781-3785
    • (1988) Proc. Natl. Acad. Sci. U.S.A. , vol.85 , pp. 3781-3785
    • Kohwi, Y.1    Kohwi-Shigematsu, T.2
  • 16
    • 0024598556 scopus 로고
    • Intramolecular DNA triplexes in supercoiled plasmids. 1. Effect of loop size on formation and stability
    • Shimizu, M., Hanvey, J. C., and Wells, R. D. (1989) Intramolecular DNA triplexes in supercoiled plasmids. Effect of loop size on formation and stability J. Biol. Chem. 264, 5944-5949 (Pubitemid 19098066)
    • (1989) Journal of Biological Chemistry , vol.264 , Issue.10 , pp. 5944-5949
    • Shimizu, M.1    Hanvey, J.C.2    Wells, R.D.3
  • 17
    • 0024510279 scopus 로고
    • Topology and formation of triple-stranded H-DNA
    • Htun, H. and Dahlberg, J. E. (1989) Topology and formation of triple-stranded H-DNA Science 243, 1571-1576 (Pubitemid 19090505)
    • (1989) Science , vol.243 , Issue.4898 , pp. 1571-1576
    • Htun, H.1    Dahlberg, J.E.2
  • 18
    • 0027155375 scopus 로고
    • Environmental influences on the in vivo level of intramolecular triplex DNA in Escherichia coli
    • Ussery, D. W. and Sinden, R. R. (1993) Environmental influences on the in vivo level of intramolecular triplex DNA in Escherichia coli Biochemistry 32, 6206-6213 (Pubitemid 23196876)
    • (1993) Biochemistry , vol.32 , Issue.24 , pp. 6206-6213
    • Ussery, D.W.1    Sinden, R.R.2
  • 19
    • 0030902414 scopus 로고    scopus 로고
    • Triplex DNA: Fundamentals, advances, and potential applications for gene therapy
    • DOI 10.1007/s001090050112
    • Chan, P. P. and Glazer, P. M. (1997) Triplex DNA: fundamentals, advance and potential applications for gene therapy J. Mol. Med. 75, 267-282 (Pubitemid 27209976)
    • (1997) Journal of Molecular Medicine , vol.75 , Issue.4 , pp. 267-282
    • Chan, P.P.1    Glazer, P.M.2
  • 22
    • 0036889091 scopus 로고    scopus 로고
    • The use of synthetic oligonucleotides as protein inhibitors and anticode drugs in cancer therapy: Accomplishments and limitations
    • DOI 10.2174/1568009023333827
    • Faria, M. and Ulrich, H. (2002) The use of synthetic oligonucleotides as protein inhibitors and anticode drugs in cancer therapy: accomplishments and limitations Curr. Cancer Drug Targets 2, 355-368 (Pubitemid 35303469)
    • (2002) Current Cancer Drug Targets , vol.2 , Issue.4 , pp. 355-368
    • Faria, M.1    Ulrich, H.2
  • 23
    • 47649089968 scopus 로고    scopus 로고
    • Targeting DNA with triplex-forming oligonucleotides to modify gene sequence
    • Simon, P., Cannata, F., Concordet, J. P., and Giovannangeli, C. (2008) Targeting DNA with triplex-forming oligonucleotides to modify gene sequence Biochimie 90, 1109-1116
    • (2008) Biochimie , vol.90 , pp. 1109-1116
    • Simon, P.1    Cannata, F.2    Concordet, J.P.3    Giovannangeli, C.4
  • 24
    • 0024357372 scopus 로고
    • Inhibition of DNA binding proteins by oligonucleotide-directed triple helix formation
    • Maher, L. J., III, Wold, B., and Dervan, P. B. (1989) Inhibition of DNA binding proteins by oligonucleotide-directed triple helix formation Science 245, 725-730 (Pubitemid 19214004)
    • (1989) Science , vol.245 , Issue.4919 , pp. 725-730
    • Maher III, L.J.1    Wold, B.2    Dervan, P.B.3
  • 25
    • 0025058003 scopus 로고
    • Site-specific inhibition of EcoRI restriction/modification enzymes by a DNA triple helix
    • Hanvey, J. C., Shimizu, M., and Wells, R. D. (1990) Site-specific inhibition of EcoRI restriction/modification enzymes by a DNA triple helix Nucleic Acids Res. 18, 157-161
    • (1990) Nucleic Acids Res. , vol.18 , pp. 157-161
    • Hanvey, J.C.1    Shimizu, M.2    Wells, R.D.3
  • 26
    • 0026348013 scopus 로고
    • Site-specific cleavage of human chromosome 4 mediated by triple-helix formation
    • Strobel, S. A., Doucette-Stamm, L. A., Riba, L., Housman, D. E., and Dervan, P. B. (1991) Site-specific cleavage of human chromosome 4 mediated by triple-helix formation Science 254, 16939-16942
    • (1991) Science , vol.254 , pp. 16939-16942
    • Strobel, S.A.1    Doucette-Stamm, L.A.2    Riba, L.3    Housman, D.E.4    Dervan, P.B.5
  • 27
    • 0029756766 scopus 로고    scopus 로고
    • Effect of third strand composition on triple helix formation: Purine versus pyrimidine oligodeoxynucleotides
    • Faucon, B., Mergny, J. L., and Helene, C. (1996) Effects of third strand composition on the triple helix formation: Purine versus pyrimidine oligonucleotides Nucleic Acids Res. 24, 3181-3188 (Pubitemid 26278558)
    • (1996) Nucleic Acids Research , vol.24 , Issue.16 , pp. 3181-3188
    • Faucon, B.1    Mergny, J.-L.2    Helene, C.3
  • 28
    • 0037039318 scopus 로고    scopus 로고
    • Chemical modification of the third strand: Differential effects on purine and pyrimidine triple helix formation
    • DOI 10.1021/bi011122m
    • Mills, M., Arimondo, P. B., Lacroix, L., Garestier, T., Klump, H., and Mergny, J. L. (2002) Chemical modification of the third strand: differential effects on purine and pyrimidine triple helix formation Biochemistry 41, 357-366 (Pubitemid 34049411)
    • (2002) Biochemistry , vol.41 , Issue.1 , pp. 357-366
    • Mills, M.1    Arimondo, P.B.2    Lacroix, L.3    Garestier, T.4    Klump, H.5    Mergny, J.-L.6
  • 30
    • 0022760931 scopus 로고
    • Amino acid sequence and gene organization of cytokeratin no. 19, an exceptional tail-less intermediate filament protein
    • Bader, B. L, Magin, T. M., Hatzfeld, M., and Franke, W. W. (1986) Amino acid sequence and gene organization of cytokeratin no. 19, an exceptional tail-less intermediate filament protein EMBO J. 5, 1865-1875
    • (1986) EMBO J. , vol.5 , pp. 1865-1875
    • Bader, B.L.1    Magin, T.M.2    Hatzfeld, M.3    Franke, W.W.4
  • 31
    • 0023667822 scopus 로고
    • Cell-specific expression of the human complement protein factor B gene: Evidence for the role of two distinct 5′-flanking elements
    • Wu, L. C., Morley, B, J., and Campbell, R. D. (1987) Cell-specific expression of the human complement protein factor B gene: evidence for the role of two distinct 5′-flanking elements Cell 48, 331-342
    • (1987) Cell , vol.48 , pp. 331-342
    • Wu, L.C.1    Morley, B.J.2    Campbell, R.D.3
  • 32
    • 0028786594 scopus 로고
    • The high stability of the triple helices formed between short purine oligonucleotides and SIV/HIV-2 vpx genes is determined by the targeted DNA structure
    • Svinarchuk, F., Monnot, M., Merle, A., Malvy, C., and Fermandjian, S. (1995) The high stability of the triple helices formed between short purine oligonucleotides and SIV/HIV-2 vpx genes is determined by the targeted DNA structure Nucleic Acids Res. 23, 3831-3836
    • (1995) Nucleic Acids Res. , vol.23 , pp. 3831-3836
    • Svinarchuk, F.1    Monnot, M.2    Merle, A.3    Malvy, C.4    Fermandjian, S.5
  • 33
    • 0029040552 scopus 로고
    • An unsually stable purine (purine-pyrimidine) short triplex
    • Svinarchuk, F., Paoletti, J., and Malvy, C. (1995) An unsually stable purine (purine-pyrimidine) short triplex J. Biol. Chem. 270, 14068-14071
    • (1995) J. Biol. Chem. , vol.270 , pp. 14068-14071
    • Svinarchuk, F.1    Paoletti, J.2    Malvy, C.3
  • 34
    • 0029036464 scopus 로고
    • Thermodynamics of an intramolecular DNA triple helix: A calorimetric and spectroscopic study of the pH and salt dependence of thermally induced structural transitions
    • Plum, G. E. and Breslauer, K. J. (1995) Thermodynamics of an intramolecular DNA triple helix: a calorimetric and spectroscopic study of the pH and salt dependence of thermally induced structural transitions J. Mol. Biol. 248, 679-695
    • (1995) J. Mol. Biol. , vol.248 , pp. 679-695
    • Plum, G.E.1    Breslauer, K.J.2
  • 35
    • 0025345246 scopus 로고
    • Formation of a stable triplex from a single DNA strand
    • Sklenar, V. and Feigon, J. (1990) Formation of a stable triplex from a single DNA strand Nature 345, 836-838
    • (1990) Nature , vol.345 , pp. 836-838
    • Sklenar, V.1    Feigon, J.2
  • 36
    • 0026091057 scopus 로고
    • Nuclear magnetic resonance structural studies of intramolecular purine·purine·pyrimidine DNA triplexes in solution: Base triple pairing alignments and strand direction
    • Radhakrishanan, I., Santor, C. D. L., and Patel, D. J. (1991) NMR structural studies of intramolecular purine•purine•pyrimidine DNA triplexes in solution: Base pairing alignments and strand direction J. Mol. Biol. 221, 1403-1418 (Pubitemid 121003461)
    • (1991) Journal of Molecular Biology , vol.221 , Issue.4 , pp. 1403-1418
    • Radhakrishnan, I.1    De Los Santos, C.2    Patel, D.J.3
  • 37
    • 0024804759 scopus 로고
    • Absorbance melting curves of RNA
    • DOI 10.1016/0076-6879(89)80108-9
    • Puglisi, J. D. and Tinoco, I., Jr. (1989) Absorbance melting curves of RNA Methods Enzymol. 180, 304-325 (Pubitemid 20039582)
    • (1989) Methods in Enzymology , vol.180 , pp. 304-325
    • Puglisi, J.D.1    Tinoco Jr., I.2
  • 38
    • 0025895932 scopus 로고
    • Structure, stability and thermodynamics of a short Intermolecular Purine-Purine-Pyrimidine triple helix
    • Pilch, D. S., Levenson, C., and Shafer, R., H. (1991) Structure, stability and thermodynamics of a short Intermolecular Purine-Purine-Pyrimidine triple helix Biochemistry 30, 6081-6087
    • (1991) Biochemistry , vol.30 , pp. 6081-6087
    • Pilch, D.S.1    Levenson, C.2    Shafer . R, H.3
  • 39
    • 0020579962 scopus 로고
    • Salt-dependent conformational transitions in the self-complementary deoxydodecanucleotide d(CGCAATTCGCG): Evidence for hairpin formation
    • Marky, L. A., Blumenfeld, K. S., Kozlowski, S., and Breslauer, K. J. (1983) Salt-dependent conformational transitions in the self-complementary deoxydodecanucleotide d(CGCAATTCG CG): evidence for hairpin formation Biopolymers 22, 1247-1257 (Pubitemid 13061907)
    • (1983) Biopolymers , vol.22 , Issue.4 , pp. 1247-1257
    • Marky, L.A.1    Blumenfeld, K.S.2    Kozlowski, S.3    Breslauer, K.J.4
  • 40
    • 0031807456 scopus 로고    scopus 로고
    • Spectroscopic investigation of an intramolecular DNA triplex containing both G.G:C and T.A:T triads and its complex with netropsin
    • Gondeau, C., Maurizot, J., C., and Durand, M. (1998) Spectroscopic investigation of an intramolecular DNA triplex containing both G.G.C and T.A.T triads and its complex with netropsin J. Biomol. Struct. Dyn. 15, 1133-1145 (Pubitemid 28311114)
    • (1998) Journal of Biomolecular Structure and Dynamics , vol.15 , Issue.6 , pp. 1133-1145
    • Gondeau, C.1    Maurizot, J.-C.2    Durand, M.3
  • 41
    • 0029914981 scopus 로고    scopus 로고
    • Sequence specificity of triplex DNA formation: Analysis by a combinatorial approach, restriction endonuclease protection selection and amplification
    • DOI 10.1073/pnas.93.7.2811
    • Hardenbol, P. and Van Dyke, M. W. (1996) Sequence specificity of triplex DNA formation: Analysis by a combinatorial approach, restriction endonuclease protection selection and amplification Proc. Natl. Acad. Sci. U.S.A. 93, 2811-2816 (Pubitemid 26114329)
    • (1996) Proceedings of the National Academy of Sciences of the United States of America , vol.93 , Issue.7 , pp. 2811-2816
    • Hardenbol, P.1    Van Dyke, M.W.2
  • 42
    • 0027295047 scopus 로고
    • Cation and sequence effects on stability of intermolecular pyrimidine-purine-purine triplex
    • Malkov, V. A., Voloshin, O. N., Soyfer, V. N., and Frank-Kamenetskii, M. D. (1993) Cation and sequence effects on stability of intermolecular pyrimidine-purine-purine triplex Nucleic Acids Res. 21, 585-591 (Pubitemid 23155548)
    • (1993) Nucleic Acids Research , vol.21 , Issue.3 , pp. 585-591
    • Malkov, V.A.1    Voloshin, O.N.2    Soyfer, V.N.3    Frank-Kamenetskii, M.D.4
  • 43
    • 0037021507 scopus 로고    scopus 로고
    • + base triplet stacks
    • DOI 10.1021/ja026952h
    • Soto, A. M., Loo, J., and Marky, L. A. (2002) Energetic contributions for the formation of TAT/TAT, TAT/CGC(+), and CGC(+)/CGC(+) base triplet stacks J. Am. Chem. Soc. 124 (48) 14355-63 (Pubitemid 35403756)
    • (2002) Journal of the American Chemical Society , vol.124 , Issue.48 , pp. 14355-14363
    • Soto, A.M.1    Loo, J.2    Marky, L.A.3
  • 45
    • 0035797089 scopus 로고    scopus 로고
    • 4: Parallel, anti-parallel, right-handed and left-handed homoduplexes of a trinucleotide repeat DNA
    • DOI 10.1016/S0304-4165(01)00150-7, PII S0304416501001507
    • Kejnovska, I., Tumova, M., and Vorlickova, M. (2001) CGA)(4): parallel, anti-parallel, right-handed and left-handed homoduplexes of a trinucleotide repeat DNA Biochim. Biophys. Acta 1527, 73-80 (Pubitemid 32566212)
    • (2001) Biochimica et Biophysica Acta - General Subjects , vol.1527 , Issue.1-2 , pp. 73-80
    • Kejnovska, I.1    Tumova, M.2    Vorlickova, M.3
  • 46
    • 0025874779 scopus 로고
    • Intramolecular triplex formation of the purine•purine• pyrimidine type
    • Chen, F. M. (1991) Intramolecular triplex formation of the purine•purine• pyrimidine type Biochemistry 30, 4472-4479
    • (1991) Biochemistry , vol.30 , pp. 4472-4479
    • Chen, F.M.1
  • 47
    • 64549099313 scopus 로고    scopus 로고
    • Circular dichroism and conformational polymorphism of DNA
    • Kypr, J., Kejnovska, I., Renciuk, D., and Vorlickova, M. (2009) Circular dichroism and conformational polymorphism of DNA Nucleic Acids Res. 37, 1713-1725
    • (2009) Nucleic Acids Res. , vol.37 , pp. 1713-1725
    • Kypr, J.1    Kejnovska, I.2    Renciuk, D.3    Vorlickova, M.4
  • 49
    • 0025369611 scopus 로고
    • Spectroscopic and calorimetric investigation on the DNA triplex formed by d(CTCTTCTTTCTTTTCTTTCTTCTC) and d(GAGAAGAAAGA) at acidic pH
    • Xodo, L. E., Manzini, G., and Quadrifoglio, F. (1990) Spectroscopic and calorimetric investigation on the DNA triplex formed by d(CTCTTCTTTCTTTTCTTTCTTCTC) and d(GAGAAGAAAGA) at acidic pH Nucleic Acids Res. 18, 3557-3564
    • (1990) Nucleic Acids Res. , vol.18 , pp. 3557-3564
    • Xodo, L.E.1    Manzini, G.2    Quadrifoglio, F.3
  • 50
    • 0026726784 scopus 로고
    • Inhibition of transcription of HIV-1 in infected human cells by oligodeoxynucleotides designed to form DNA triple helices
    • McShan, W. M., Rossen, R. D., Laughter, A. H., Trial, J., Kessler, D. J., Zendegui, J. G., Hogan, M. E., and Orson, F. M. (1992) Inhibition of transcription of HIV-1 in infected human cells by oligodeoxynucleotides designed to form DNA triple helices J. Biol. Chem. 267, 5712-5721
    • (1992) J. Biol. Chem. , vol.267 , pp. 5712-5721
    • McShan, W.M.1    Rossen, R.D.2    Laughter, A.H.3    Trial, J.4    Kessler, D.J.5    Zendegui, J.G.6    Hogan, M.E.7    Orson, F.M.8
  • 51
    • 0027365615 scopus 로고
    • A novel DNA duplex. A parallel-stranded DNA helix with Hoogsteen base pairing
    • DOI 10.1021/bi00095a008
    • Liu, K., Miles, H. T., Frazier, J., and Sasisekharan, V. (1993) A novel DNA duplex. A parallel-stranded DNA helix with Hoogsteen base pairing Biochemistry 32, 11802-11809 (Pubitemid 23344704)
    • (1993) Biochemistry , vol.32 , Issue.44 , pp. 11802-11809
    • Liu, K.1    Miles, H.T.2    Frazier, J.3    Sasisekharan, V.4
  • 52
    • 0036299062 scopus 로고    scopus 로고
    • Circular dichroism spectroscopy reveals invariant conformation of guanine runs in DNA
    • DOI 10.1002/bip.10112
    • Kypr, J. and Vorlickova, M. (2002) Circular dichroism spectroscopy reveals conformation of guanine runs in DNA Biopolymers 67, 275-277 (Pubitemid 34712523)
    • (2002) Biopolymers - Biospectroscopy Section , vol.67 , Issue.4-5 , pp. 275-277
    • Kypr, J.1    Vorlickova, M.2
  • 54
    • 0026722438 scopus 로고
    • A-DNA in solution as studied by diverse approaches
    • Ivanov, V. I. and Krylov, D. Y. (1992) A-DNA in solution as studied by diverse approaches Methods Enzymol. 211, 111-127
    • (1992) Methods Enzymol. , vol.211 , pp. 111-127
    • Ivanov, V.I.1    Krylov, D.Y.2
  • 57
    • 0026437888 scopus 로고
    • Stabilities of double- and triple-strand helical nucleic acids
    • Cheng, Y.-K. and Pettitt, B. M. (1992) Stabilities of double- and triple-strand helical nucleic acids Prog. Biophys. Mol. Biol. 58, 225-257
    • (1992) Prog. Biophys. Mol. Biol. , vol.58 , pp. 225-257
    • Cheng, Y.-K.1    Pettitt, B.M.2
  • 58
    • 67649311606 scopus 로고    scopus 로고
    • Evaluation of effects of bivalent cations on the formation of purine-rich triple-helix DNA by ESI-FT-MS
    • Wan, C., Cui, M., Song, F., Liu, Z., and Liu, S. (2009) Evaluation of effects of bivalent cations on the formation of purine-rich triple-helix DNA by ESI-FT-MS J. Am. Soc. Mass Spectrom. 20, 1281-1286
    • (2009) J. Am. Soc. Mass Spectrom. , vol.20 , pp. 1281-1286
    • Wan, C.1    Cui, M.2    Song, F.3    Liu, Z.4    Liu, S.5
  • 59
    • 0027267925 scopus 로고
    • 7 of guanines in Z-DNA and a drug - DNA complex
    • Gao, Y.-G., Sriram, M., and Wang, A. H.-J. (1993) Crystallographic studies of metal ion-DNA interactions: Different binding modes of cobalt(II), copper(II) and barium(II) to N7 of guanines in Z-DNA and a drug-DNA complex Nucleic Acids Res. 21, 4093-4101 (Pubitemid 23258727)
    • (1993) Nucleic Acids Research , vol.21 , Issue.17 , pp. 4093-4101
    • Gao, Y.-G.1    Sriram, M.2    Wang, A.H.-J.3
  • 60
    • 0002190462 scopus 로고
    • 2+ with DNA: Assessment of metal binding sites and DNA conformations by spectroscopic and thermal denaturation studies
    • 2+ with DNA: Assessment of metal binding sites and DNA conformations by spectroscopic and thermal denaturation studies Inorg. Chim. Acta 153, 79-86
    • (1988) Inorg. Chim. Acta , vol.153 , pp. 79-86
    • Bhattacharyya, R.G.1    Nayak, K.K.2
  • 61
    • 0000884532 scopus 로고    scopus 로고
    • Effect of cations on purine-purine-pyrimidine triple helix formation in mixed-valence salt solutions
    • DOI 10.1046/j.1432-1327.1999.00219.x
    • Floris, R., Scaggiante, B., Manzini, G., Quadrifoglio, F., and Xodo, L. E. (1999) Effect of cations on purine-purine-pyrimidine triple helix formation in mixed-valence salt solutions Eur. J. Biochem. 260, 801-809 (Pubitemid 29148647)
    • (1999) European Journal of Biochemistry , vol.260 , Issue.3 , pp. 801-809
    • Floris, R.1    Scaggiante, B.2    Manzini, G.3    Quadrifoglio, F.4    Xodo, L.E.5
  • 62
    • 0028206493 scopus 로고
    • Divalent metal cations upon coordination to the N7 of purines differentially stabilize the PyPuPu DNA triplex due to unequal Hoogsteen- type hydrogen bond enhancement
    • Potaman, V. N. and Soyfer, V. N. (1994) Divalent metal cations upon coordination to the N7 of purines differentially stabilize the Py.Pu.Pu DNA triplex due to unequal Hoogsteen-type hydrogen bond enhancement J. Biomol. Struct. Dyn. 11, 1035-1040 (Pubitemid 24200481)
    • (1994) Journal of Biomolecular Structure and Dynamics , vol.11 , Issue.5 , pp. 1035-1040
    • Potaman, V.N.1    Soyfer, V.N.2
  • 64
    • 0034249870 scopus 로고    scopus 로고
    • The effect of metal binding to the N7 site of purine nucleotides on their structure, energy, and involvement in base pairing
    • Sponer, J., Sabat, M., Gorb, L., Leszczynski, J., Lippert, B., and Hobza, P. (2000) The effect of metal binding to the N7 site of purine nucleotides on their structure, energy, and involvement in base pairing J. Phys. Chem. B 104, 7535-7544
    • (2000) J. Phys. Chem. B , vol.104 , pp. 7535-7544
    • Sponer, J.1    Sabat, M.2    Gorb, L.3    Leszczynski, J.4    Lippert, B.5    Hobza, P.6
  • 66
    • 33645775325 scopus 로고    scopus 로고
    • Nucleic acid helix stability: Effects of salt concentration, cation valence and size, and chain length
    • Tan, Z.-J. and Chen, S.-J. (2006) Nucleic acid helix stability: Effects of salt concentration, cation valence and size, and chain length Biophys. J. 90, 1175-1190
    • (2006) Biophys. J. , vol.90 , pp. 1175-1190
    • Tan, Z.-J.1    Chen, S.-J.2
  • 68
    • 0037938685 scopus 로고    scopus 로고
    • Do natural DNA triple-helical structures occur and function in vivo?
    • Zain, R. and Sun, J. S. (2003) Do natural DNA triple-helical structures occur and function in vivo? Cell. Mol. Life Sci. 60, 862-870 (Pubitemid 36735117)
    • (2003) Cellular and Molecular Life Sciences , vol.60 , Issue.5 , pp. 862-870
    • Zain, R.1    Sun, J.-S.2
  • 71
    • 38449106276 scopus 로고    scopus 로고
    • Discovery of alternative DNA structures: A heroic decade (1979-1989)
    • DOI 10.2741/2744
    • Mirkin, S. M. (2008) Discovery of alternative DNA structures: a heroic decade (1979-1989) Front. Biosci. 13, 1064-1071 (Pubitemid 351594748)
    • (2008) Frontiers in Bioscience , vol.13 , Issue.3 , pp. 1064-1071
    • Mirkin, S.M.1
  • 72
    • 47649084520 scopus 로고    scopus 로고
    • DNA triple helices: Biological consequences and therapeutic potential
    • Jain, A., Wang, G., and Vasquez, K. M. (2008) DNA triple helices: biological consequences and therapeutic potential Biochimie 90, 1117-1130
    • (2008) Biochimie , vol.90 , pp. 1117-1130
    • Jain, A.1    Wang, G.2    Vasquez, K.M.3
  • 73
    • 0034730371 scopus 로고    scopus 로고
    • Searching genomes for sequences with the potential to form intrastrand triple helices
    • Hoyne, P. R., Edwards, L. M., Viari, A., and Maher, L. J., III (2000) Searching genomes for sequences with the potential to form intrastrand triple helices J. Mol. Biol. 302, 797-809
    • (2000) J. Mol. Biol. , vol.302 , pp. 797-809
    • Hoyne, P.R.1    Edwards, L.M.2    Viari, A.3    Maher III, L.J.4
  • 75
    • 0032478168 scopus 로고    scopus 로고
    • Characterization of purine-motif triplex DNA-binding proteins in HeLa extracts
    • DOI 10.1021/bi9717486
    • Musso, M., Nelson, L. D., and Van Dyke, M. W. (1998) Characterization of purine-motif triplex DNA-binding proteins in HeLa extracts Biochemistry 37, 3086-3095 (Pubitemid 28145763)
    • (1998) Biochemistry , vol.37 , Issue.9 , pp. 3086-3095
    • Musso, M.1    Nelson, L.D.2    Van Dyke, M.W.3
  • 76
    • 0034102424 scopus 로고    scopus 로고
    • The yeast STM1 gene encodes a purine motif triple helical DNA-binding protein
    • DOI 10.1074/jbc.275.8.5573
    • Nelson, L. D., Musso, M., and Van Dyke, M. W. (2000) The yeast STM1 gene encodes a purine motif triple helical DNA-binding protein J. Biol. Chem. 275, 5573-5581 (Pubitemid 30115194)
    • (2000) Journal of Biological Chemistry , vol.275 , Issue.8 , pp. 5573-5581
    • Nelson, L.D.1    Musso, M.2    Van Dyke, M.W.3
  • 78
    • 33745299348 scopus 로고    scopus 로고
    • Targeted genome modification via triple helix formation
    • Kalish, J. M. and Glazer, P. M. (2005) Targeted genome modification via triple helix formation Ann. N.Y. Acad. Sci. 1058, 151-161
    • (2005) Ann. N.Y. Acad. Sci. , vol.1058 , pp. 151-161
    • Kalish, J.M.1    Glazer, P.M.2
  • 79
    • 0029036249 scopus 로고
    • Occurrence of potential cruciform and H-DNA forming sequences in genomic DNA
    • Schroth, G. P. and P. Shing Ho, P. (1995) Occurrence of potential cruciform and H-DNA forming sequences in genomic DNA Nucleic Acids Res. 23 (11) 1977-1983
    • (1995) Nucleic Acids Res. , vol.23 , Issue.11 , pp. 1977-1983
    • Schroth, G.P.1    Shing Ho P, P.2
  • 80
    • 65249122125 scopus 로고    scopus 로고
    • Repair of DNA lesions associated with triplex-forming oligonucleotides
    • Chin, J. Y. and Glazer, P. M. (2009) Repair of DNA lesions associated with triplex-forming oligonucleotides Mol. Carcinog. 48, 389-399
    • (2009) Mol. Carcinog. , vol.48 , pp. 389-399
    • Chin, J.Y.1    Glazer, P.M.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.