Whither Pst? The approximation of Qst by Pst in evolutionary and conservation biology

Journal of Evolutionary Biology

Volumn 24, Issue 6, 2011, Pages 1160-1168

  Brommer, J E ^a  

^a UNIVERSITY OF HELSINKI   (Finland)

Author keywords

Local adaptation; Population divergence; Quantitative trait

Indexed keywords

CONSERVATION MANAGEMENT; DATA SET; DIVERGENCE; EVOLUTIONARY BIOLOGY; GENETIC VARIATION; LOCAL ADAPTATION; NATURAL SELECTION; PHENOTYPIC PLASTICITY;

ADAPTATION; ENVIRONMENTAL PROTECTION; EVOLUTION; GENETIC SELECTION; GENETIC VARIABILITY; PHENOTYPE; POPULATION DYNAMICS; QUANTITATIVE TRAIT LOCUS; REVIEW; UNCERTAINTY;

ADAPTATION, BIOLOGICAL; BIOLOGICAL EVOLUTION; CONSERVATION OF NATURAL RESOURCES; GENETIC VARIATION; PHENOTYPE; POPULATION DYNAMICS; QUANTITATIVE TRAIT LOCI; SELECTION, GENETIC; UNCERTAINTY;

EID: 79955657273     PISSN: 1010061X     EISSN: 14209101     Source Type: Journal    
DOI: 10.1111/j.1420-9101.2011.02268.x     Document Type: Review

References (32)

1. Alho, J.S., Herczeg, G., Soderman, F., Laurila, A., Jonsson, K.I. & Merila, J. 2010. Increasing melanism along a latitudinal gradient in a widespread amphibian: local adaptation, ontogenic or environmental plasticity? BMC Evol. Biol. 10: 317.
2. Antoniazza, S., Burri, R., Fumagalli, L., Goudet, J. & Roulin, A. 2010. Local adaptation maintains clinal variation in melanin-based coloration of European barn owls (Tyto alba). Evolution 64: 1944-1954.
3. Cano, J.M., Makinen, H.S., Leinonen, T., Freyhof, J. & Merila, J. 2008. Extreme neutral genetic and morphological divergence supports classification of Adriatic three-spined stickleback (Gasterosteus aculeatus) populations as distinct conservation units. Biol. Conserv. 141: 1055-1066.
4. Chenoweth, S.F. & Blows, M.W. 2008. Qst meets the G matrix: the dimensionality of adaptive divergence in multiple correlated quantitative traits. Evolution 62: 1437-1449.
5. Ellegren, H. & Sheldon, B.C. 2008. Genetic basis of fitness differences in natural populations. Nature 452: 169-175.
6. Gay, L., Neubauer, G., Zagalska-Neubauer, M., Pons, J., Bell, D.A. & Crochet, P. 2009. Speciation with gene flow in the large white-headed gulls: does selection counterbalance introgression? Heredity 102: 133-146.
7. Hedrick, P.W. 2005. A standardized genetic differentiation measure. Evolution 59: 1633-1638.
8. Jost, L. 2008. G(ST) and its relatives do not measure differentiation. Mol. Ecol. 17: 4015-4026.
9. Lehtonen, P.K., Laaksonen, T., Artemyev, A.V., Belskii, E., Both, C., Bures, S. et al. 2009. Geographic patterns of genetic differentiation and plumage colour variation are different in the pied flycatcher (Ficedula hypoleuca). Mol. Ecol. 18: 4463-4476.
10. Leinonen, T., Cano, J.M., Makinen, H. & Merila, J. 2006. Contrasting patterns of body shape and neutral genetic divergence in marine and lake populations of threespine sticklebacks. J. Evol. Biol. 19: 1803-1812.
11. Leinonen, T., O'Hara, R., Cano, J.M. & Merilä, J. 2008. Comparative studies of quantitative trait and neutral marker divergence: a meta-analysis. J. Evol. Biol. 21: 1-17.
12. Lynch, M., Pfrender, M., Spitze, K., Lehman, N., Hicks, J., Allen, D. et al. 1999. The quantitative and molecular genetic architecture of a subdivided species. Evolution 53: 100-110.
13. McKay, J.K. & Latta, R.G. 2002. Adaptive population divergence: markers, QTL and traits. Trends Ecol. Evol. 17: 285-291.
14. Merilä, J. 1997. Quantitative trait and allozyme divergence in the greenfinch (Carduelis chloris, Aves: Fringillidae). Biol. J. Linn. Soc. 61: 243-266.
15. Merilä, J. & Crnokrak, P. 2001. Comparison of genetic differentiation at marker loci and quantitative traits. J. Evol. Biol. 14: 892-903.
16. ST under neutrality. Genetics 180: 1023-1037.
17. O'Hara, R.B. & Merila, J. 2005. Bias and precision in Q(ST) estimates: problems and some solutions. Genetics 171: 1331-1339.
18. Ostbye, K., Naesje, T.F., Bernatchez, L., Sandlund, O.T. & Hindar, K. 2005. Morphological divergence and origin of sympatric populations of European whitefish (Coregonus lavaretus L.) in Lake Femund, Norway. J. Evol. Biol. 18: 683-702.
19. Phillimore, A.B., Owens, I.P.F., Black, R.A., Chittock, J., Burke, T. & Clegg, S.M. 2008. Complex patterns of genetic and phenotypic divergence in an island bird and the consequences for delimiting conservation units. Mol. Ecol. 17: 2839-2853.
20. Pujol, B., Wilson, A.J., Ross, R.I.C. & Pannell, J.R. 2008. Are Q(ST)-F-ST comparisons for natural populations meaningful? Mol. Ecol. 17: 4782-4785.
21. Raeymaekers, J.A.M., Van Houdt, J.K.J., Larmuseau, M.H.D., Geldof, S. & Volckaert, F.A.M. 2007. Divergent selection as revealed by P-ST and QTL-based F-ST in three-spined stickleback (Gasterosteus aculeatus) populations along a coastal-inland gradient. Mol. Ecol. 16: 891-905.
22. Saether, S.A., Fiske, P., Kalas, J.A., Kuresoo, A., Luigujoe, L., Piertney, S.B. et al. 2007. Inferring local adaptation from Q(ST)-F-ST comparisons: neutral genetic and quantitative trait variation in European populations of great snipe. J. Evol. Biol. 20: 1563-1576.
23. Saint-Laurent, R., Legault, M. & Bernatchez, L. 2003. Divergent selection maintains adaptive differentiation despite high gene flow between sympatric rainbow smelt ecotypes (Osmerus mordax Mitchill). Mol. Ecol. 12: 315-330.
24. Santure, A.W., Ewen, J.G., Sicard, D., Roff, D.A. & Moller, A.P. 2010. Population structure in the barn swallow, Hirundo rustica: a comparison between neutral DNA markers and quantitative traits. Biol. J. Linn. Soc. 99: 306-314.
25. Storz, J.F. 2002. Contrasting patterns of divergence in quantitative traits and neutral DNA markers: analysis of clinal variation. Mol. Ecol. 11: 2537-2551.
26. Turan, C., Oral, M., Ozturk, B. & Duzgunes, E. 2006. Morphometric and meristic variation between stocks of Bluefish (Pomatomus saltatrix) in the Black, Marmara, Aegean and northeastern Mediterranean Seas. Fish. Res. 79: 139-147.
27. Vasemagi, A. & Primmer, C.R. 2005. Challenges for identifying functionally important genetic variation: the promise of combining complementary research strategies. Mol. Ecol. 14: 3623-3642.
28. ST at two spatial scales. Heredity 95: 466-475.
29. Wheat, C.W. 2010. Rapidly developing functional genomics in ecological model systems via 454 transcriptome sequencing. Genetica 138: 433-451.
30. ST. Mol. Ecol. 17: 1885-1889.
31. Wojcik, A.M., Polly, P.D., Sikorski, M.D. & Wojcik, J.M. 2006. Selection in a cycling population: differential response among skeletal traits. Evolution 60: 1925-1935.
32. Wright, S. 1943. Isolation by distance. Genetics 28: 114-138.