메뉴 건너뛰기




Volumn 49, Issue 5, 2011, Pages 1890-1898

Accurate and practical identification of 20 Fusarium species by seven-locus sequence analysis and reverse line blot hybridization, and an in vitro antifungal susceptibility study

Author keywords

[No Author keywords available]

Indexed keywords

AMPHOTERICIN B; ANTIFUNGAL AGENT; CASPOFUNGIN; FLUCONAZOLE; INTERNAL TRANSCRIBED SPACER; ITRACONAZOLE; MICAFUNGIN; RIBOSOME RNA; VORICONAZOLE;

EID: 79955543073     PISSN: 00951137     EISSN: 1098660X     Source Type: Journal    
DOI: 10.1128/JCM.02415-10     Document Type: Article
Times cited : (76)

References (42)
  • 2
    • 34247099621 scopus 로고    scopus 로고
    • Universal in vitro antifungal resistance of genetic clades of the Fusarium solani species complex
    • Azor, M., J. Gene, J. Cano, and J. Guarro. 2007. Universal in vitro antifungal resistance of genetic clades of the Fusarium solani species complex. Antimicrob. Agents Chemother. 51:1500-1503.
    • (2007) Antimicrob. Agents Chemother. , vol.51 , pp. 1500-1503
    • Azor, M.1    Gene, J.2    Cano, J.3    Guarro, J.4
  • 3
    • 44449086826 scopus 로고    scopus 로고
    • In vitro antifungal susceptibility and molecular characterization of clinical isolates of Fusarium verticillioides (F. moniliforme) and Fusarium thapsinum
    • Azor, M., et al. 2008. In vitro antifungal susceptibility and molecular characterization of clinical isolates of Fusarium verticillioides (F. moniliforme) and Fusarium thapsinum. Antimicrob. Agents Chemother. 52:2228-2231.
    • (2008) Antimicrob. Agents Chemother. , vol.52 , pp. 2228-2231
    • Azor, M.1
  • 4
    • 65249137594 scopus 로고    scopus 로고
    • Sequence-based identification of Aspergillus, Fusarium, and Mucorales species in the clinical mycology laboratory: Where are we and where should we go from here?
    • Balajee, S. A., et al. 2009. Sequence-based identification of Aspergillus, Fusarium, and Mucorales species in the clinical mycology laboratory: where are we and where should we go from here? J. Clin. Microbiol. 47:877-884.
    • (2009) J. Clin. Microbiol. , vol.47 , pp. 877-884
    • Balajee, S.A.1
  • 5
    • 77954142354 scopus 로고    scopus 로고
    • Multilocus phylogenetics show high levels of endemic fusaria inhabiting Sardinian soils (Tyrrhenian Islands)
    • Balmas, V., et al. 2010. Multilocus phylogenetics show high levels of endemic fusaria inhabiting Sardinian soils (Tyrrhenian Islands). Mycologia 102:803-812.
    • (2010) Mycologia , vol.102 , pp. 803-812
    • Balmas, V.1
  • 8
    • 33644661057 scopus 로고    scopus 로고
    • Head-to-head comparison of the activities of currently available antifungal agents against 3,378 Spanish clinical isolates of yeasts and filamentous fungi
    • Cuenca-Estrella, M., et al. 2006. Head-to-head comparison of the activities of currently available antifungal agents against 3,378 Spanish clinical isolates of yeasts and filamentous fungi. Antimicrob. Agents Chemother. 50:917-921.
    • (2006) Antimicrob. Agents Chemother. , vol.50 , pp. 917-921
    • Cuenca-Estrella, M.1
  • 9
    • 77955661996 scopus 로고    scopus 로고
    • Development of a new MLST scheme for differentiation of Fusarium solani species complex (FSSC) isolates
    • Debourgogne, A., et al. 2010. Development of a new MLST scheme for differentiation of Fusarium solani species complex (FSSC) isolates. J. Microbiol. Methods 82:319-323.
    • (2010) J. Microbiol. Methods , vol.82 , pp. 319-323
    • Debourgogne, A.1
  • 11
    • 42149163705 scopus 로고    scopus 로고
    • Biological and phylogenetic characterization of Fusarium oxysporum complex, which causes yellows on Brassica spp., and proposal of F. oxysporum f. sp. rapae, a novel forma specialis pathogenic on B. rapa in Japan
    • DOI 10.1094/PHYTO-98-4-0475
    • Enya, J., et al. 2008. Biological and phylogenetic characterization of Fusarium oxysporum complex, which causes yellows on Brassica spp., and proposal of F. oxysporum f. sp. rapae, a novel forma specialis pathogenic on B. rapa in Japan. Phytopathology 98:475-483. (Pubitemid 351534575)
    • (2008) Phytopathology , vol.98 , Issue.4 , pp. 475-483
    • Enya, J.1    Togawa, M.2    Takeuchi, T.3    Yoshida, S.4    Tsushima, S.5    Arie, T.6    Sakai, T.7
  • 12
    • 3442882259 scopus 로고    scopus 로고
    • FUSARIUM-ID v. 1.0: A DNA sequence database for identifying Fusarium
    • Geiser, D. M., et al. 2004. FUSARIUM-ID v. 1.0: a DNA sequence database for identifying Fusarium. Eur. J. Plant Pathol. 110:473-479.
    • (2004) Eur. J. Plant Pathol. , vol.110 , pp. 473-479
    • Geiser, D.M.1
  • 13
    • 34250899593 scopus 로고    scopus 로고
    • Multiplex PCR-based reverse line blot hybridization assay (mPCR/RLB) - A practical epidemiological and diagnostic tool
    • Kong, F. R., and G. L. Gilbert. 2006. Multiplex PCR-based reverse line blot hybridization assay (mPCR/RLB) - a practical epidemiological and diagnostic tool. Nat. Protoc. 1:2668-2680.
    • (2006) Nat. Protoc. , vol.1 , pp. 2668-2680
    • Kong, F.R.1    Gilbert, G.L.2
  • 14
    • 33845786974 scopus 로고    scopus 로고
    • Phylogeny of Fusarium oxysporum f. sp. lactucae inferred from mitochondrial small subunit, elongation factor 1-alpha, and nuclear ribosomal intergenic spacer sequence data
    • Mbofung, G. Y., S. G. Hong, and B. M. Pryor. 2007. Phylogeny of Fusarium oxysporum f. sp. lactucae inferred from mitochondrial small subunit, elongation factor 1-alpha, and nuclear ribosomal intergenic spacer sequence data. Phytopathology 97:87-98.
    • (2007) Phytopathology , vol.97 , pp. 87-98
    • Mbofung, G.Y.1    Hong, S.G.2    Pryor, B.M.3
  • 15
    • 77950513662 scopus 로고    scopus 로고
    • Molecular phylogenetic diversity of dermatologic and other human pathogenic fusarial isolates from hospitals in northern and central Italy
    • Migheli, Q., et al. 2010. Molecular phylogenetic diversity of dermatologic and other human pathogenic fusarial isolates from hospitals in northern and central Italy. J. Clin. Microbiol. 48:1076-1084.
    • (2010) J. Clin. Microbiol. , vol.48 , pp. 1076-1084
    • Migheli, Q.1
  • 16
    • 65249175645 scopus 로고    scopus 로고
    • Multilocus phylogenetic diversity of Fusarium avenaceum pathogenic on lisianthus
    • Nalim, F. A., W. H. Elmer, R. J. McGovern, and D. M. Geiser. 2009. Multilocus phylogenetic diversity of Fusarium avenaceum pathogenic on lisianthus. Phytopathology 99:462-468.
    • (2009) Phytopathology , vol.99 , pp. 462-468
    • Nalim, F.A.1    Elmer, W.H.2    McGovern, R.J.3    Geiser, D.M.4
  • 18
    • 0037108390 scopus 로고    scopus 로고
    • Cutaneous infection by Fusarium species in healthy and immunocompromised hosts: Implications for diagnosis and management
    • Nucci, M., and E. Anaissie. 2002. Cutaneous infection by Fusarium species in healthy and immunocompromised hosts: implications for diagnosis and management. Clin. Infect. Dis. 35:909-920.
    • (2002) Clin. Infect. Dis. , vol.35 , pp. 909-920
    • Nucci, M.1    Anaissie, E.2
  • 19
    • 35448960891 scopus 로고    scopus 로고
    • Fusarium infections in immunocompromised patients
    • Nucci, M., and E. Anaissie. 2007. Fusarium infections in immunocompromised patients. Clin. Microbiol. Rev. 20:695-704.
    • (2007) Clin. Microbiol. Rev. , vol.20 , pp. 695-704
    • Nucci, M.1    Anaissie, E.2
  • 20
    • 0001446750 scopus 로고    scopus 로고
    • Molecular phylogeny of the Nectria haematococca-Fusarium solani species complex
    • O'Donnell, K. 2000. Molecular phylogeny of the Nectria haematococca-Fusarium solani species complex. Mycologia 92:919-938.
    • (2000) Mycologia , vol.92 , pp. 919-938
    • O'Donnell, K.1
  • 21
    • 0031778848 scopus 로고    scopus 로고
    • Molecular systematics and phylogeography of the Gibberella fujikuroi species complex
    • O'Donnell, K., E. Cigelnik, and H. I. Nirenberg. 1998. Molecular systematics and phylogeography of the Gibberella fujikuroi species complex. Mycologia 90:465-493.
    • (1998) Mycologia , vol.90 , pp. 465-493
    • O'Donnell, K.1    Cigelnik, E.2    Nirenberg, H.I.3
  • 22
    • 70350382721 scopus 로고    scopus 로고
    • A two-locus DNA sequence database for typing plant and human pathogens within the Fusarium oxysporum species complex
    • O'Donnell, K., et al. 2009. A two-locus DNA sequence database for typing plant and human pathogens within the Fusarium oxysporum species complex. Fungal Genet. Biol. 46:936-948.
    • (2009) Fungal Genet. Biol. , vol.46 , pp. 936-948
    • O'Donnell, K.1
  • 24
    • 53149086711 scopus 로고    scopus 로고
    • Molecular phylogenetic diversity, multilocus haplotype nomenclature, and in vitro antifungal resistance within the Fusarium solani species complex
    • O'Donnell, K., et al. 2008. Molecular phylogenetic diversity, multilocus haplotype nomenclature, and in vitro antifungal resistance within the Fusarium solani species complex. J. Clin. Microbiol. 46:2477-2490.
    • (2008) J. Clin. Microbiol. , vol.46 , pp. 2477-2490
    • O'Donnell, K.1
  • 25
    • 71549147835 scopus 로고    scopus 로고
    • Novel multilocus sequence typing scheme reveals high genetic diversity of human pathogenic members of the Fusarium incarnatum-F. equiseti and F. chlamydosporum species complexes within the United States
    • O'Donnell, K., et al. 2009. Novel multilocus sequence typing scheme reveals high genetic diversity of human pathogenic members of the Fusarium incarnatum-F. equiseti and F. chlamydosporum species complexes within the United States. J. Clin. Microbiol. 47:3851-3861.
    • (2009) J. Clin. Microbiol. , vol.47 , pp. 3851-3861
    • O'Donnell, K.1
  • 26
    • 8644265007 scopus 로고    scopus 로고
    • Genetic diversity of human pathogenic members of the Fusarium oxysporum complex inferred from multilocus DNA sequence data and amplified fragment length polymorphism analyses: Evidence for the recent dispersion of a geographically widespread clonal lineage and nosocomial origin
    • O'Donnell, K., et al. 2004. Genetic diversity of human pathogenic members of the Fusarium oxysporum complex inferred from multilocus DNA sequence data and amplified fragment length polymorphism analyses: evidence for the recent dispersion of a geographically widespread clonal lineage and nosocomial origin. J. Clin. Microbiol. 42:5109-5120.
    • (2004) J. Clin. Microbiol. , vol.42 , pp. 5109-5120
    • O'Donnell, K.1
  • 27
    • 77957797529 scopus 로고    scopus 로고
    • Internet-accessible DNA sequence database for identifying fusaria from human and animal infections
    • O'Donnell, K., et al. 2010. Internet-accessible DNA sequence database for identifying fusaria from human and animal infections. J. Clin. Microbiol. 48:3708-3718.
    • (2010) J. Clin. Microbiol. , vol.48 , pp. 3708-3718
    • O'Donnell, K.1
  • 28
    • 0036784325 scopus 로고    scopus 로고
    • In vitro activities of investigational triazoles against Fusarium species: Effects of inoculum size and incubation time on broth microdilution susceptibility test results
    • Paphitou, N. I., et al. 2002. In vitro activities of investigational triazoles against Fusarium species: effects of inoculum size and incubation time on broth microdilution susceptibility test results. Antimicrob. Agents Chemother. 46:3298-3300.
    • (2002) Antimicrob. Agents Chemother. , vol.46 , pp. 3298-3300
    • Paphitou, N.I.1
  • 29
    • 17644369269 scopus 로고    scopus 로고
    • Treatment of non-Aspergillus moulds in immunocompromised patients, with amphotericin B lipid complex
    • Perfect, J. R. 2005. Treatment of non-Aspergillus moulds in immunocompromised patients, with amphotericin B lipid complex. Clin. Infect. Dis. 40: S401-S408.
    • (2005) Clin. Infect. Dis. , vol.40
    • Perfect, J.R.1
  • 30
    • 0038556830 scopus 로고    scopus 로고
    • Voriconazole treatment for less-common, emerging, or refractory fungal infections
    • Perfect, J. R., et al. 2003. Voriconazole treatment for less-common, emerging, or refractory fungal infections. Clin. Infect. Dis. 36:1122-1131.
    • (2003) Clin. Infect. Dis. , vol.36 , pp. 1122-1131
    • Perfect, J.R.1
  • 31
    • 5444272819 scopus 로고    scopus 로고
    • Rare and emerging opportunistic fungal pathogens: Concern for resistance beyond Candida albicans and Aspergillus fumigatus
    • Pfaller, M. A., and D. J. Diekema. 2004. Rare and emerging opportunistic fungal pathogens: concern for resistance beyond Candida albicans and Aspergillus fumigatus. J. Clin. Microbiol. 42:4419-4431.
    • (2004) J. Clin. Microbiol. , vol.42 , pp. 4419-4431
    • Pfaller, M.A.1    Diekema, D.J.2
  • 32
    • 77949916235 scopus 로고    scopus 로고
    • A molecular based strategy for rapid diagnosis of toxigenic Fusarium species associated to cereal grains from Argentina
    • Sampietro, D. A., et al. 2010. A molecular based strategy for rapid diagnosis of toxigenic Fusarium species associated to cereal grains from Argentina. Fungal Biol. 114:74-81.
    • (2010) Fungal Biol. , vol.114 , pp. 74-81
    • Sampietro, D.A.1
  • 33
    • 64049103856 scopus 로고    scopus 로고
    • Taxonomy and phylogeny of the Fusarium dimerum species group
    • Schroers, H. J., et al. 2009. Taxonomy and phylogeny of the Fusarium dimerum species group. Mycologia 101:44-70.
    • (2009) Mycologia , vol.101 , pp. 44-70
    • Schroers, H.J.1
  • 34
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: Molecular evolutionary genetics analysis (MEGA) software version 4.0
    • Tamura, K., J. Dudley, M. Nei, and S. Kumar. 2007. MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol. Biol. Evol. 24:1596-1599.
    • (2007) Mol. Biol. Evol. , vol.24 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 35
    • 0034500354 scopus 로고    scopus 로고
    • Phylogenetic species recognition and species concepts in fungi
    • Taylor, J. W., et al. 2000. Phylogenetic species recognition and species concepts in fungi. Fungal Genet. Biol. 31:21-32.
    • (2000) Fungal Genet. Biol. , vol.31 , pp. 21-32
    • Taylor, J.W.1
  • 36
    • 0027968068 scopus 로고
    • Clustal W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson, J. D., D. G. Higgins, and T. J. Gibson. 1994. Clustal W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22:4673-4680.
    • (1994) Nucleic Acids Res. , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 37
    • 46249130819 scopus 로고    scopus 로고
    • Species distribution and in vitro antifungal susceptibility patterns of 75 clinical isolates of Fusarium spp. from northern Italy
    • Tortorano, A. M., et al. 2008. Species distribution and in vitro antifungal susceptibility patterns of 75 clinical isolates of Fusarium spp. from northern Italy. Antimicrob. Agents Chemother. 52:2683-2685.
    • (2008) Antimicrob. Agents Chemother. , vol.52 , pp. 2683-2685
    • Tortorano, A.M.1
  • 38
    • 6344269343 scopus 로고    scopus 로고
    • Complete sequence of virulence plasmid pEIB1 from the marine fish pathogen Vibrio anguillarum strain MVM425 and location of its replication region
    • Wu, H., Y. Ma, Y. Zhang, and H. Zhang. 2004. Complete sequence of virulence plasmid pEIB1 from the marine fish pathogen Vibrio anguillarum strain MVM425 and location of its replication region. J. Appl. Microbiol. 97:1021-1028.
    • (2004) J. Appl. Microbiol. , vol.97 , pp. 1021-1028
    • Wu, H.1    Ma, Y.2    Zhang, Y.3    Zhang, H.4
  • 39
    • 75649115721 scopus 로고    scopus 로고
    • Identification of pathogenic Nocardia species by reverse line blot hybridization targeting the 16S rRNA and 16S-23S rRNA gene spacer regions
    • Xiao, M., et al. 2010. Identification of pathogenic Nocardia species by reverse line blot hybridization targeting the 16S rRNA and 16S-23S rRNA gene spacer regions. J. Clin. Microbiol. 48:503-511.
    • (2010) J. Clin. Microbiol. , vol.48 , pp. 503-511
    • Xiao, M.1
  • 40
    • 72449144827 scopus 로고    scopus 로고
    • A novel Asian clade within the Fusarium graminearum species complex includes a newly discovered cereal head blight pathogen from the Russian Far East
    • Yli-Mattila, T., et al. 2009. A novel Asian clade within the Fusarium graminearum species complex includes a newly discovered cereal head blight pathogen from the Russian Far East. Mycologia 101:841-852.
    • (2009) Mycologia , vol.101 , pp. 841-852
    • Yli-Mattila, T.1
  • 41
    • 34548688165 scopus 로고    scopus 로고
    • Reverse line blot hybridization assay for identification of medically important fungi from culture and clinical specimens
    • Zeng, X., et al. 2007. Reverse line blot hybridization assay for identification of medically important fungi from culture and clinical specimens. J. Clin. Microbiol. 45:2872-2880.
    • (2007) J. Clin. Microbiol. , vol.45 , pp. 2872-2880
    • Zeng, X.1
  • 42
    • 33745181669 scopus 로고    scopus 로고
    • Members of the Fusarium solani species complex that cause infections in both humans and plants are common in the environment
    • Zhang, N., et al. 2006. Members of the Fusarium solani species complex that cause infections in both humans and plants are common in the environment. J. Clin. Microbiol. 44:2186-2190.
    • (2006) J. Clin. Microbiol. , vol.44 , pp. 2186-2190
    • Zhang, N.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.