-
1
-
-
20244383426
-
Development of a species-specific PCR-restriction fragment length polymorphism analysis procedure for identification of Madurella mycetomatis
-
Ahmed, A. O., M. M. Mukhtar, M. Kools-Sijmons, A. H. Fahal, S. de Hoog, B. G. van den Ende, E. E. Zijlslra, H. Verbrugh, E. S. Abugroun, A. M. Elhassan, and A. van Belkum. 1999. Development of a species-specific PCR-restriction fragment length polymorphism analysis procedure for identification of Madurella mycetomatis. J. Clin. Microbiol. 37:3175-3178.
-
(1999)
J. Clin. Microbiol
, vol.37
, pp. 3175-3178
-
-
Ahmed, A.O.1
Mukhtar, M.M.2
Kools-Sijmons, M.3
Fahal, A.H.4
de Hoog, S.5
van den Ende, B.G.6
Zijlslra, E.E.7
Verbrugh, H.8
Abugroun, E.S.9
Elhassan, A.M.10
van Belkum, A.11
-
2
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul, S. F., T. L. Madden, A. A. Schaffer, J. Zhang, Z. Zhang, W. Miller, and D. J. Lipman. 1997. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25:3389-3402.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
3
-
-
15244342076
-
Aspergillus lentulus sp. nov., a new sibling species of A. fumigatus
-
Balajee, S. A., J. Gribskov, E. Hanley, D. Nickle, and K. A. Marr. 2005. Aspergillus lentulus sp. nov., a new sibling species of A. fumigatus. Eukaryot. Cell 4:625-632.
-
(2005)
Eukaryot. Cell
, vol.4
, pp. 625-632
-
-
Balajee, S.A.1
Gribskov, J.2
Hanley, E.3
Nickle, D.4
Marr, K.A.5
-
4
-
-
14544305567
-
Monochrome LightCycler PCR assay for detection and quantification of five common species of Candida and Aspergillus
-
Bu, R., R. K. Sathiapalan, M. M. Ibrahim, I. Al Mohsen, E. Almodavar, M. I. Gutierrez, and K. Bhatia. 2005. Monochrome LightCycler PCR assay for detection and quantification of five common species of Candida and Aspergillus. J. Med. Microbiol. 54:243-248.
-
(2005)
J. Med. Microbiol
, vol.54
, pp. 243-248
-
-
Bu, R.1
Sathiapalan, R.K.2
Ibrahim, M.M.3
Al Mohsen, I.4
Almodavar, E.5
Gutierrez, M.I.6
Bhatia, K.7
-
5
-
-
0034760526
-
Polymorphic internal transcribed spacer region 1 DNA sequences identify medically important yeasts
-
Chen, Y. C., J. D. Eisner, M. M. Kattar, S. L. Rassoulian-Barrett, K. Lafe, U. Bui, A. P. Limaye, and B. T. Cookson. 2001. Polymorphic internal transcribed spacer region 1 DNA sequences identify medically important yeasts. J. Clin. Microbiol. 39:4042-4051.
-
(2001)
J. Clin. Microbiol
, vol.39
, pp. 4042-4051
-
-
Chen, Y.C.1
Eisner, J.D.2
Kattar, M.M.3
Rassoulian-Barrett, S.L.4
Lafe, K.5
Bui, U.6
Limaye, A.P.7
Cookson, B.T.8
-
6
-
-
0034130743
-
Identification of medically important yeasts using PCR-based detection of DNA sequence polymorphisms in the internal transcribed spacer 2 region of the rRNA genes
-
Chen, Y. C., J. D. Eisner, M. M. Kattar, S. L. Rassoulian-Barrett, K. LaFe, S. L. Yarfitz, A. P. Limaye, and B. T. Cookson. 2000. Identification of medically important yeasts using PCR-based detection of DNA sequence polymorphisms in the internal transcribed spacer 2 region of the rRNA genes. J. Clin. Microbiol. 38:2302-2310.
-
(2000)
J. Clin. Microbiol
, vol.38
, pp. 2302-2310
-
-
Chen, Y.C.1
Eisner, J.D.2
Kattar, M.M.3
Rassoulian-Barrett, S.L.4
LaFe, K.5
Yarfitz, S.L.6
Limaye, A.P.7
Cookson, B.T.8
-
7
-
-
30744443282
-
Internal transcribed spacer sequencing versus biochemical profiling for identification of medically important yeasts
-
Ciardo, D. E., G. Schar, E. C. Bottger, M. Altwegg, and P. P. Bosshard. 2006. Internal transcribed spacer sequencing versus biochemical profiling for identification of medically important yeasts. J. Clin. Microbiol. 44:77-84.
-
(2006)
J. Clin. Microbiol
, vol.44
, pp. 77-84
-
-
Ciardo, D.E.1
Schar, G.2
Bottger, E.C.3
Altwegg, M.4
Bosshard, P.P.5
-
8
-
-
3843062469
-
Rapid differentiation of Aspergillus species from other medically important opportunistic molds and yeasts by PCR-enzyme immunoassay
-
de Aguirre, L., S. F. Hurst, J. S. Choi, J. H. Shin, H. P. Hinrikson, and C. J. Morrison. 2004. Rapid differentiation of Aspergillus species from other medically important opportunistic molds and yeasts by PCR-enzyme immunoassay. J. Clin. Microbiol. 42:3495-3504.
-
(2004)
J. Clin. Microbiol
, vol.42
, pp. 3495-3504
-
-
de Aguirre, L.1
Hurst, S.F.2
Choi, J.S.3
Shin, J.H.4
Hinrikson, H.P.5
Morrison, C.J.6
-
9
-
-
0031717334
-
Rapid identification of Candida species with species-specific DNA probes
-
Elie, C. M., T. J. Lott, E. Reiss, and C. J. Morrison. 1998. Rapid identification of Candida species with species-specific DNA probes. J. Clin. Microbiol. 36:3260-3265.
-
(1998)
J. Clin. Microbiol
, vol.36
, pp. 3260-3265
-
-
Elie, C.M.1
Lott, T.J.2
Reiss, E.3
Morrison, C.J.4
-
10
-
-
0037337375
-
Origin and utility of the reverse dot-blot
-
Gold, B. 2003. Origin and utility of the reverse dot-blot. Expert Rev. Mol. Diagn. 3:143-152.
-
(2003)
Expert Rev. Mol. Diagn
, vol.3
, pp. 143-152
-
-
Gold, B.1
-
11
-
-
26944436273
-
Development of a nested qualitative real-time PCR assay to detect Aspergillus species DNA in clinical specimens
-
Halliday, C., Q. X. Wu, G. James, and T. Sorrell. 2005. Development of a nested qualitative real-time PCR assay to detect Aspergillus species DNA in clinical specimens. J. Clin. Microbiol. 43:5366-5368.
-
(2005)
J. Clin. Microbiol
, vol.43
, pp. 5366-5368
-
-
Halliday, C.1
Wu, Q.X.2
James, G.3
Sorrell, T.4
-
12
-
-
0033994981
-
Identification of Aspergillus species using internal transcribed spacer regions 1 and 2
-
Henry, T., P. C. Iwen, and S. H. Hinrichs. 2000. Identification of Aspergillus species using internal transcribed spacer regions 1 and 2. J. Clin. Microbiol. 38:1510-1515.
-
(2000)
J. Clin. Microbiol
, vol.38
, pp. 1510-1515
-
-
Henry, T.1
Iwen, P.C.2
Hinrichs, S.H.3
-
13
-
-
18544371066
-
Assessment of ribosomal large-subunit D1-D2, internal transcribed spacer 1, and internal transcribed spacer 2 regions as targets for molecular identification of medically important Aspergillus species
-
Hinrikson, H. P., S. F. Hurst, T. J. Lott, D. W. Warnock, and C. J. Morrison. 2005. Assessment of ribosomal large-subunit D1-D2, internal transcribed spacer 1, and internal transcribed spacer 2 regions as targets for molecular identification of medically important Aspergillus species. J. Clin. Microbiol. 43:2092-2103.
-
(2005)
J. Clin. Microbiol
, vol.43
, pp. 2092-2103
-
-
Hinrikson, H.P.1
Hurst, S.F.2
Lott, T.J.3
Warnock, D.W.4
Morrison, C.J.5
-
14
-
-
23744507285
-
Identification of medically important molds by an oligonucleotide array
-
Hsiao, C. R., L. Huang, J. P. Bouchara, R. Barton, H. C. Li, and T. C. Chang. 2005. Identification of medically important molds by an oligonucleotide array. J. Clin. Microbiol. 43:3760-3768.
-
(2005)
J. Clin. Microbiol
, vol.43
, pp. 3760-3768
-
-
Hsiao, C.R.1
Huang, L.2
Bouchara, J.P.3
Barton, R.4
Li, H.C.5
Chang, T.C.6
-
15
-
-
33748767408
-
High-throughput identification of clinical pathogenic fungi by hybridization to an oligonucleotide microarray
-
Huang, A., J. W. Li, Z. Q. Shen, X. W. Wang, and M. Jin. 2006. High-throughput identification of clinical pathogenic fungi by hybridization to an oligonucleotide microarray. J. Clin. Microbiol. 44:3299-3305.
-
(2006)
J. Clin. Microbiol
, vol.44
, pp. 3299-3305
-
-
Huang, A.1
Li, J.W.2
Shen, Z.Q.3
Wang, X.W.4
Jin, M.5
-
16
-
-
0141751683
-
Rapid detection of pathogenic fungi from clinical specimens using LightCycler real-time fluorescence PCR
-
Imhof, A., C. Schaer, G. Schoedon, D. J. Schaer, R. B. Walter, A. Schaffner, and M. Schneemann. 2003. Rapid detection of pathogenic fungi from clinical specimens using LightCycler real-time fluorescence PCR. Eur. J. Clin. Microbiol. Infect. Dis. 22:558-560.
-
(2003)
Eur. J. Clin. Microbiol. Infect. Dis
, vol.22
, pp. 558-560
-
-
Imhof, A.1
Schaer, C.2
Schoedon, G.3
Schaer, D.J.4
Walter, R.B.5
Schaffner, A.6
Schneemann, M.7
-
17
-
-
0742304295
-
The internal transcribed spacers and 5.8S rRNA gene show extensive diversity among isolates of the Cryptococcus neoformans species complex
-
Katsu, M., S. Kidd, A. Ando, M. L. Moretti-Branchini, Y. Mikami, K. Nishimura, and W. Meyer. 2004. The internal transcribed spacers and 5.8S rRNA gene show extensive diversity among isolates of the Cryptococcus neoformans species complex. FEMS Yeast Res. 4:377-388.
-
(2004)
FEMS Yeast Res
, vol.4
, pp. 377-388
-
-
Katsu, M.1
Kidd, S.2
Ando, A.3
Moretti-Branchini, M.L.4
Mikami, Y.5
Nishimura, K.6
Meyer, W.7
-
18
-
-
34250899593
-
Multiplex PCR-based reverse line blot hybridization assay (mPCR/RLB) - a practical epidemiological and diagnostic tool
-
Kong, F., and G. L. Gilbert. 2007. Multiplex PCR-based reverse line blot hybridization assay (mPCR/RLB) - a practical epidemiological and diagnostic tool. Nat. Protocols 6:2668-2680.
-
(2007)
Nat. Protocols
, vol.6
, pp. 2668-2680
-
-
Kong, F.1
Gilbert, G.L.2
-
19
-
-
0020059397
-
Improved diagnostic medium for separadon of Cryptococcus neoformans var. neoformans (serotypes A and D) and Cryptococcus neoformans var. gattii (serotypes B and C)
-
Kwon-Chung, K. J., I. Polacheck, and J. E. Bennett. 1982. Improved diagnostic medium for separadon of Cryptococcus neoformans var. neoformans (serotypes A and D) and Cryptococcus neoformans var. gattii (serotypes B and C). J. Clin. Microbiol. 15:535-537.
-
(1982)
J. Clin. Microbiol
, vol.15
, pp. 535-537
-
-
Kwon-Chung, K.J.1
Polacheck, I.2
Bennett, J.E.3
-
20
-
-
0004103114
-
Medically important fungi
-
4th ed. ASM Press, Washington, DC
-
Larone, D. H. 2002. Medically important fungi. A guide to identification, 4th ed. ASM Press, Washington, DC.
-
(2002)
A guide to identification
-
-
Larone, D.H.1
-
21
-
-
33847058412
-
Development and clinical application of a panfungal PCR assay to detect and identify fungal DNA in tissue specimens
-
Lau, A., S. Chen, T. Sorrell, D. Carter, R. Malik, P. Martin, and C. Halliday. 2007. Development and clinical application of a panfungal PCR assay to detect and identify fungal DNA in tissue specimens. J. Clin. Microbiol. 45:380-385.
-
(2007)
J. Clin. Microbiol
, vol.45
, pp. 380-385
-
-
Lau, A.1
Chen, S.2
Sorrell, T.3
Carter, D.4
Malik, R.5
Martin, P.6
Halliday, C.7
-
22
-
-
33644912365
-
Identification of medically important yeast species by sequence analysis of the internal transcribed spacer regions
-
Leaw, S. N., H. C. Chang, H. F. Sun, R. Barton, J. P. Bouchara, and T. C. Chang. 2006. Identification of medically important yeast species by sequence analysis of the internal transcribed spacer regions. J. Clin. Microbiol. 44:693-699.
-
(2006)
J. Clin. Microbiol
, vol.44
, pp. 693-699
-
-
Leaw, S.N.1
Chang, H.C.2
Sun, H.F.3
Barton, R.4
Bouchara, J.P.5
Chang, T.C.6
-
23
-
-
26944441639
-
Development of a DNA microarray for detection and identification of fungal pathogens involved in invasive mycoses
-
Leinberger, D. M., U. Schumacher, I. B. Autenrieth, and T. T. Bachmann. 2005. Development of a DNA microarray for detection and identification of fungal pathogens involved in invasive mycoses. J. Clin. Microbiol. 43:4943-4953.
-
(2005)
J. Clin. Microbiol
, vol.43
, pp. 4943-4953
-
-
Leinberger, D.M.1
Schumacher, U.2
Autenrieth, I.B.3
Bachmann, T.T.4
-
24
-
-
0034793154
-
Rapid identification of dimorphic and yeast-like fungal pathogens using specific DNA probes
-
Lindsley, M. D., S. F. Hurst, N. J. Iqbal, and C. J. Morrison. 2001. Rapid identification of dimorphic and yeast-like fungal pathogens using specific DNA probes. J. Clin. Microbiol. 39:3505-3511.
-
(2001)
J. Clin. Microbiol
, vol.39
, pp. 3505-3511
-
-
Lindsley, M.D.1
Hurst, S.F.2
Iqbal, N.J.3
Morrison, C.J.4
-
25
-
-
31544439397
-
Characterization of Fusarium spp. isolates by PCR-RFLP analysis of the intergenic spacer region of the rRNA gene (rDNA)
-
Llorens, A., M. J. Hinojo, R. Mateo, M. T. Gonzalez-Jaen, F. M. Valle-Algarra, A. Logrieco, and M. Jimenez. 2006. Characterization of Fusarium spp. isolates by PCR-RFLP analysis of the intergenic spacer region of the rRNA gene (rDNA). Int. J. Food Microbiol. 106:297-306.
-
(2006)
Int. J. Food Microbiol
, vol.106
, pp. 297-306
-
-
Llorens, A.1
Hinojo, M.J.2
Mateo, R.3
Gonzalez-Jaen, M.T.4
Valle-Algarra, F.M.5
Logrieco, A.6
Jimenez, M.7
-
26
-
-
0038506717
-
Rapid detection of Candida albicans in clinical blood samples by using a TaqMan-based PCR assay
-
Maaroufi, Y., C. Heymans, J. M. De Bruyne, V. Duchateau, H. Rodriguez-Villalobos, M. Aoun, and F. Crokaert. 2003. Rapid detection of Candida albicans in clinical blood samples by using a TaqMan-based PCR assay. J. Clin. Microbiol. 41:3293-3298.
-
(2003)
J. Clin. Microbiol
, vol.41
, pp. 3293-3298
-
-
Maaroufi, Y.1
Heymans, C.2
De Bruyne, J.M.3
Duchateau, V.4
Rodriguez-Villalobos, H.5
Aoun, M.6
Crokaert, F.7
-
28
-
-
0033771091
-
Development of a PCR-based line probe assay for identification of fungal pathogens
-
Martin, C., D. Roberts, W. M. van Der, R. Rossau, G. Jannes, T. Smith, and M. Maher. 2000. Development of a PCR-based line probe assay for identification of fungal pathogens. J. Clin. Microbiol. 38:3735-3742.
-
(2000)
J. Clin. Microbiol
, vol.38
, pp. 3735-3742
-
-
Martin, C.1
Roberts, D.2
van Der, W.M.3
Rossau, R.4
Jannes, G.5
Smith, T.6
Maher, M.7
-
29
-
-
13944260541
-
Management of invasive mycoses in hematology patients: Current approaches
-
Perfect, J. R. 2004. Management of invasive mycoses in hematology patients: current approaches. Oncology (Williston Park) 18:5-14.
-
(2004)
Oncology (Williston Park)
, vol.18
, pp. 5-14
-
-
Perfect, J.R.1
-
30
-
-
27644499051
-
Effectiveness of anidulafungin in eradicating Candida species in invasive candidiasis
-
Pfaller, M. A., D. J. Diekema, L. Boyken, S. A. Messer, S. Tendolkar, R. J. Hollis, and B. P. Goldstein. 2005. Effectiveness of anidulafungin in eradicating Candida species in invasive candidiasis. Antimicrob. Agents Chemother. 49:4795-4797.
-
(2005)
Antimicrob. Agents Chemother
, vol.49
, pp. 4795-4797
-
-
Pfaller, M.A.1
Diekema, D.J.2
Boyken, L.3
Messer, S.A.4
Tendolkar, S.5
Hollis, R.J.6
Goldstein, B.P.7
-
31
-
-
33644896288
-
Simultaneous detection and identification of Candida, Aspergillus, and Cryptococcus species by reverse line blot hybridization
-
Playford, E. G., F. Kong, Y. Sun, H. Wang, C. Halliday, and T. C. Sorrell. 2006. Simultaneous detection and identification of Candida, Aspergillus, and Cryptococcus species by reverse line blot hybridization. J. Clin. Microbiol. 44:876-880.
-
(2006)
J. Clin. Microbiol
, vol.44
, pp. 876-880
-
-
Playford, E.G.1
Kong, F.2
Sun, Y.3
Wang, H.4
Halliday, C.5
Sorrell, T.C.6
-
32
-
-
0042023213
-
Identification of Exophiala mesophila isolated from treated dental unit waterlines
-
Porteous, N. B., A. M. Grooters, S. W. Redding, E. H. Thompson, M. G. Rinaldi, G. S. De Hoog, and D. A. Sutton. 2003. Identification of Exophiala mesophila isolated from treated dental unit waterlines. J. Clin. Microbiol. 41:3885-3889.
-
(2003)
J. Clin. Microbiol
, vol.41
, pp. 3885-3889
-
-
Porteous, N.B.1
Grooters, A.M.2
Redding, S.W.3
Thompson, E.H.4
Rinaldi, M.G.5
De Hoog, G.S.6
Sutton, D.A.7
-
33
-
-
0344876483
-
Rapid identification of fungi by sequencing the ITS1 and ITS2 regions using an automated capillary electrophoresis system
-
Pryce, T. M., S. Palladino, I. D. Kay, and G. W. Coombs. 2003. Rapid identification of fungi by sequencing the ITS1 and ITS2 regions using an automated capillary electrophoresis system. Med. Mycol. 41:369-381.
-
(2003)
Med. Mycol
, vol.41
, pp. 369-381
-
-
Pryce, T.M.1
Palladino, S.2
Kay, I.D.3
Coombs, G.W.4
-
34
-
-
0034505140
-
Non-culture based diagnostic tests for mycotic infections
-
Reiss, E., T. Obayashi, K. Orle, M. Yoshida, and R. M. Zancope-Oliveira. 2000. Non-culture based diagnostic tests for mycotic infections. Med. Mycol. 38(Suppl. 1):147-159.
-
(2000)
Med. Mycol
, vol.38
, Issue.SUPPL. 1
, pp. 147-159
-
-
Reiss, E.1
Obayashi, T.2
Orle, K.3
Yoshida, M.4
Zancope-Oliveira, R.M.5
-
35
-
-
1642363501
-
Infections due to emerging and uncommon medically important fungal pathogens
-
Walsh, T. J., A. Groll, J. Hiemenz, R. Fleming, E. Roilides, and E. Anaissie. 2004. Infections due to emerging and uncommon medically important fungal pathogens. Clin. Microbiol. Infect. 10(Suppl. 1):48-66.
-
(2004)
Clin. Microbiol. Infect
, vol.10
, Issue.SUPPL. 1
, pp. 48-66
-
-
Walsh, T.J.1
Groll, A.2
Hiemenz, J.3
Fleming, R.4
Roilides, E.5
Anaissie, E.6
-
36
-
-
0042816537
-
-
Walsh, T. J., V. Petraitis, R. Petraitiene, A. Field-Ridley, D. Sutton, M. Ghannoum, T. Sein, R. Schaufele, J. Peter, J. Bacher, H. Casler, D. Armstrong, A. Espinel-Ingroff, M. G. Rinaldi, and C. A. Lyman. 2003. Experimental pulmonary aspergillosis due to Aspergillus terreus: pathogenesis and treatment of an emerging fungal pathogen resistant to amphotericin B. J. Infect. Dis. 188:305-319.
-
Walsh, T. J., V. Petraitis, R. Petraitiene, A. Field-Ridley, D. Sutton, M. Ghannoum, T. Sein, R. Schaufele, J. Peter, J. Bacher, H. Casler, D. Armstrong, A. Espinel-Ingroff, M. G. Rinaldi, and C. A. Lyman. 2003. Experimental pulmonary aspergillosis due to Aspergillus terreus: pathogenesis and treatment of an emerging fungal pathogen resistant to amphotericin B. J. Infect. Dis. 188:305-319.
-
-
-
-
37
-
-
0001985097
-
Candida, Cryptococcus, and other yeasts of medical importance
-
R. P. Murray, E. J. Baron, M. A. Pfaller, F. C. Tenover, and R. H. Yolken ed, ASM Press, Washington, DC
-
Warren, N., and K. Hazen. 1999. Candida, Cryptococcus, and other yeasts of medical importance, p. 1184-1199. In R. P. Murray, E. J. Baron, M. A. Pfaller, F. C. Tenover, and R. H. Yolken (ed.), Manual of clinical microbiology. ASM Press, Washington, DC.
-
(1999)
Manual of clinical microbiology
, pp. 1184-1199
-
-
Warren, N.1
Hazen, K.2
-
38
-
-
0033969611
-
Diagnosis of invasive aspergillosis in bone marrow transplant recipients by polymerase chain reaction
-
Williamson, E. C., J. P. Leeming, H. M. Palmer, C. G. Steward, D. Warnock, D. I. Marks, and M. R. Millar. 2000. Diagnosis of invasive aspergillosis in bone marrow transplant recipients by polymerase chain reaction. Br. J. Haematol. 108:132-139.
-
(2000)
Br. J. Haematol
, vol.108
, pp. 132-139
-
-
Williamson, E.C.1
Leeming, J.P.2
Palmer, H.M.3
Steward, C.G.4
Warnock, D.5
Marks, D.I.6
Millar, M.R.7
|