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Volumn 15, Issue 3, 2011, Pages 373-378

Saccharopolyspora lacisalsi sp. nov., a novel halophilic actinomycete isolated from a salt lake in Xinjiang, China

Author keywords

Halophilic; Saccharopolyspora lacisalsi sp. nov.; Salt lake

Indexed keywords

BACTERIAL DNA; RNA 16S;

EID: 79955521896     PISSN: 14310651     EISSN: 14334909     Source Type: Journal    
DOI: 10.1007/s00792-011-0369-0     Document Type: Article
Times cited : (23)

References (46)
  • 1
    • 35648991375 scopus 로고    scopus 로고
    • EzTaxon: a web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences
    • Chun J, Lee JH, Jung Y, Kim M, Kim S, Kim BK, Lim YW (2007) EzTaxon: a web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences. Int J Syst Evol Microbiol 57: 2259-2261.
    • (2007) Int J Syst Evol Microbiol , vol.57 , pp. 2259-2261
    • Chun, J.1    Lee, J.H.2    Jung, Y.3    Kim, M.4    Kim, S.5    Kim, B.K.6    Lim, Y.W.7
  • 2
    • 0019306204 scopus 로고
    • Lipids in the classification and identification of coryneform bacteria containing peptidoglycan based on 2, 4-diaminobutyric acid
    • Collins MD, Jones D (1980) Lipids in the classification and identification of coryneform bacteria containing peptidoglycan based on 2, 4-diaminobutyric acid. J Appl Bacteriol 48: 459-470.
    • (1980) J Appl Bacteriol , vol.48 , pp. 459-470
    • Collins, M.D.1    Jones, D.2
  • 5
    • 0001991903 scopus 로고
    • Determinative methods of light microscopy
    • P. Gerhardt, R. G. E. Murray, R. N. Costilow, E. W. Nester, W. A. Wood, N. R. Krieg, and G. H. Phillips (Eds.), Washington: American Society for Microbiology
    • Doetsch RN (1981) Determinative methods of light microscopy. In: Gerhardt P, Murray RGE, Costilow RN, Nester EW, Wood WA, Krieg NR, Phillips GH (eds) Manual of methods for general bacteriology. American Society for Microbiology, Washington, pp 21-33.
    • (1981) Manual of Methods for General Bacteriology , pp. 21-33
    • Doetsch, R.N.1
  • 7
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: an approach using the bootstrap
    • Felsenstein J (1985) Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39: 783-789.
    • (1985) Evolution , vol.39 , pp. 783-789
    • Felsenstein, J.1
  • 8
    • 84959747425 scopus 로고
    • Toward defining the course of evolution: minimum change for a specific tree topology
    • Fitch WM (1971) Toward defining the course of evolution: minimum change for a specific tree topology. Syst Zool 20: 406-416.
    • (1971) Syst Zool , vol.20 , pp. 406-416
    • Fitch, W.M.1
  • 9
    • 0005482101 scopus 로고
    • Saccharopolyspora gregorii and Saccharopolyspora hordei: two new actinomycete species from fodder
    • Goodfellow M, Lacey J, Athalye M, Embley TM, Bowen T (1989) Saccharopolyspora gregorii and Saccharopolyspora hordei: two new actinomycete species from fodder. J Gen Microbiol 135: 2125-2139.
    • (1989) J Gen Microbiol , vol.135 , pp. 2125-2139
    • Goodfellow, M.1    Lacey, J.2    Athalye, M.3    Embley, T.M.4    Bowen, T.5
  • 10
    • 0018099415 scopus 로고
    • Rapid method for distinction of Gram-negative from Gram-positive bacteria
    • Gregersen T (1978) Rapid method for distinction of Gram-negative from Gram-positive bacteria. Eur J Appl Microbiol Biotechnol 5: 123-127.
    • (1978) Eur J Appl Microbiol Biotechnol , vol.5 , pp. 123-127
    • Gregersen, T.1
  • 11
    • 0030870230 scopus 로고    scopus 로고
    • Demetria terragena gen. nov., sp. nov., a new genus of actinomycetes isolated from compost soil
    • Groth I, Schumann P, Rainey FA, Martin K, Schuetze B, Augsten K (1997) Demetria terragena gen. nov., sp. nov., a new genus of actinomycetes isolated from compost soil. Int J Syst Bacteriol 47: 1129-1133.
    • (1997) Int J Syst Bacteriol , vol.47 , pp. 1129-1133
    • Groth, I.1    Schumann, P.2    Rainey, F.A.3    Martin, K.4    Schuetze, B.5    Augsten, K.6
  • 12
    • 76549110772 scopus 로고    scopus 로고
    • Halomonas xinjiangensis sp. nov., a halotolerant bacterium isolated from a salt lake in Xinjiang, China
    • Guan TW, Xiao J, Zhao K, Luo XX, Zhang XP, Zhang LL (2010) Halomonas xinjiangensis sp. nov., a halotolerant bacterium isolated from a salt lake in Xinjiang, China. Int J Syst Evol Microbiol 60: 349-352.
    • (2010) Int J Syst Evol Microbiol , vol.60 , pp. 349-352
    • Guan, T.W.1    Xiao, J.2    Zhao, K.3    Luo, X.X.4    Zhang, X.P.5    Zhang, L.L.6
  • 13
    • 0021077093 scopus 로고
    • A rapid analysis for chemical grouping of aerobic actinomycetes
    • Hasegawa T, Takizawa M, Tanida S (1983) A rapid analysis for chemical grouping of aerobic actinomycetes. J Gen Appl Microbiol 29: 319-322.
    • (1983) J Gen Appl Microbiol , vol.29 , pp. 319-322
    • Hasegawa, T.1    Takizawa, M.2    Tanida, S.3
  • 14
    • 0029799185 scopus 로고    scopus 로고
    • Numerical analysis of fatty acid patterns of coryneform bacteria and related taxa
    • Kämpfer P, Kroppenstedt RM (1996) Numerical analysis of fatty acid patterns of coryneform bacteria and related taxa. Can J Microbiol 42: 989-1005.
    • (1996) Can J Microbiol , vol.42 , pp. 989-1005
    • Kämpfer, P.1    Kroppenstedt, R.M.2
  • 16
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequence
    • Kimura M (1980) A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequence. J Mol Evol 16: 111-120.
    • (1980) J Mol Evol , vol.16 , pp. 111-120
    • Kimura, M.1
  • 17
    • 0024448961 scopus 로고
    • Transfer of Faenia rectivirgula Kurup and Agre 1983 to the genus Saccharopolyspora Lacey and Goodfellow 1975, elevation of Saccharopolyspora hirsuta subsp. taberi Labeda 1987 to species level, and emended description of the genus Saccharopolyspora
    • Korn-Wendisch F, Kempf A, Grund E, Kroppenstedt T, Kutzner HJ (1989) Transfer of Faenia rectivirgula Kurup and Agre 1983 to the genus Saccharopolyspora Lacey and Goodfellow 1975, elevation of Saccharopolyspora hirsuta subsp. taberi Labeda 1987 to species level, and emended description of the genus Saccharopolyspora. Int J Syst Bacteriol 39: 430-441.
    • (1989) Int J Syst Bacteriol , vol.39 , pp. 430-441
    • Korn-Wendisch, F.1    Kempf, A.2    Grund, E.3    Kroppenstedt, T.4    Kutzner, H.J.5
  • 18
    • 0023132796 scopus 로고
    • Transfer of the type strain of Streptomyces erthyraeus (Waksman 1923) Waksman and Henrici 1948 to the genus Saccharopolyspora Lacey and Goodfellow 1975 as Saccharopolyspora erythraea sp. nov., and designation of a neotype strain for Streptomyces erythraeus
    • Labeda DP (1987) Transfer of the type strain of Streptomyces erthyraeus (Waksman 1923) Waksman and Henrici 1948 to the genus Saccharopolyspora Lacey and Goodfellow 1975 as Saccharopolyspora erythraea sp. nov., and designation of a neotype strain for Streptomyces erythraeus. Int J Syst Bacteriol 37: 19-22.
    • (1987) Int J Syst Bacteriol , vol.37 , pp. 19-22
    • Labeda, D.P.1
  • 19
    • 0016741538 scopus 로고
    • A novel actinomycete from sugarcane bagasse: Saccharopolysporahirsuta gen. et sp. nov
    • Lacey J, Goodfellow M (1975) A novel actinomycete from sugarcane bagasse: Saccharopolysporahirsuta gen. et sp. nov. J Gen Microbiol 88: 75-85.
    • (1975) J Gen Microbiol , vol.88 , pp. 75-85
    • Lacey, J.1    Goodfellow, M.2
  • 20
    • 72149122100 scopus 로고    scopus 로고
    • Saccharopolyspora tripterygii sp. nov., an endophytic actinomycete isolated from the stem of Tripterygium hypoglaucum
    • Li J, Zhao GZ, Qin S, Huang HY, Zhu WY, Xu LH, Li WJ (2009) Saccharopolyspora tripterygii sp. nov., an endophytic actinomycete isolated from the stem of Tripterygium hypoglaucum. Int J Syst Evol Microbiol 59: 3040-3044.
    • (2009) Int J Syst Evol Microbiol , vol.59 , pp. 3040-3044
    • Li, J.1    Zhao, G.Z.2    Qin, S.3    Huang, H.Y.4    Zhu, W.Y.5    Xu, L.H.6    Li, W.J.7
  • 21
    • 0035065812 scopus 로고    scopus 로고
    • Saccharopolyspora flava sp. nov. and Saccharopolyspora thermophila sp. nov., novel actinomycetes from soil
    • Lu Z, Li Z, Wang L, Qi W, Goodfellow M (2001) Saccharopolyspora flava sp. nov. and Saccharopolyspora thermophila sp. nov., novel actinomycetes from soil. Int J Syst Evol Microbiol 51: 319-325.
    • (2001) Int J Syst Evol Microbiol , vol.51 , pp. 319-325
    • Lu, Z.1    Li, Z.2    Wang, L.3    Qi, W.4    Goodfellow, M.5
  • 22
    • 85010439719 scopus 로고
    • A procedure for the isolation of deoxyribonucleic acid from microorganisms
    • Marmur J (1961) A procedure for the isolation of deoxyribonucleic acid from microorganisms. J Mol Biol 3: 208-218.
    • (1961) J Mol Biol , vol.3 , pp. 208-218
    • Marmur, J.1
  • 23
    • 0025141498 scopus 로고
    • Saccharopolyspora spinosa sp. nov. isolated from soil collected in a sugar mill rum still
    • Mertz FP, Yao RC (1990) Saccharopolyspora spinosa sp. nov. isolated from soil collected in a sugar mill rum still. Int J Syst Bacteriol 40: 34-39.
    • (1990) Int J Syst Bacteriol , vol.40 , pp. 34-39
    • Mertz, F.P.1    Yao, R.C.2
  • 24
    • 0000198211 scopus 로고
    • Precise measurement of the G+C content of deoxyribonucleic acid by high-performance liquid chromatography
    • Mesbah M, Premachandran U, Whitman WB (1989) Precise measurement of the G+C content of deoxyribonucleic acid by high-performance liquid chromatography. Int J Syst Bacteriol 39: 159-167.
    • (1989) Int J Syst Bacteriol , vol.39 , pp. 159-167
    • Mesbah, M.1    Premachandran, U.2    Whitman, W.B.3
  • 25
    • 0018393563 scopus 로고
    • Fatty acid and polar lipid composition in the classification of Cellulomonas, Oerskovia and related taxa
    • Minnikin DE, Collins MD, Goodfellow M (1979) Fatty acid and polar lipid composition in the classification of Cellulomonas, Oerskovia and related taxa. J Appl Bacteriol 47: 87-95.
    • (1979) J Appl Bacteriol , vol.47 , pp. 87-95
    • Minnikin, D.E.1    Collins, M.D.2    Goodfellow, M.3
  • 26
    • 0018834020 scopus 로고
    • Thin layer chromatography of methanolysates of mycolic acid-containing bacteria
    • Minnikin DE, Hutchinson IG, Caldicott AB, Goodfellow M (1980) Thin layer chromatography of methanolysates of mycolic acid-containing bacteria. J Chromatogr 188: 221-233.
    • (1980) J Chromatogr , vol.188 , pp. 221-233
    • Minnikin, D.E.1    Hutchinson, I.G.2    Caldicott, A.B.3    Goodfellow, M.4
  • 27
    • 44449144647 scopus 로고    scopus 로고
    • Saccharopolyspora cebuensis sp. nov., a novel actinomycete isolated from a Philippine sponge (Porifera)
    • Pimentel-Elardo SM, Tiro LP, Grozdanov L, Hentschel U (2008) Saccharopolyspora cebuensis sp. nov., a novel actinomycete isolated from a Philippine sponge (Porifera). Int J Syst Evol Microbiol 58: 628-632.
    • (2008) Int J Syst Evol Microbiol , vol.58 , pp. 628-632
    • Pimentel-Elardo, S.M.1    Tiro, L.P.2    Grozdanov, L.3    Hentschel, U.4
  • 28
    • 77952711977 scopus 로고    scopus 로고
    • Saccharopolyspora gloriosae sp. nov., an endophytic actinomycete isolated from the stem of Gloriosa superba L
    • Qin S, Chen HH, Klenk HP, Kim CJ, Xu LH, Li WJ (2010) Saccharopolyspora gloriosae sp. nov., an endophytic actinomycete isolated from the stem of Gloriosa superba L. Int J Syst Evol Microbiol 60: 1147-1151.
    • (2010) Int J Syst Evol Microbiol , vol.60 , pp. 1147-1151
    • Qin, S.1    Chen, H.H.2    Klenk, H.P.3    Kim, C.J.4    Xu, L.H.5    Li, W.J.6
  • 29
    • 0023375195 scopus 로고
    • The neighbor-joining method: a new method for reconstructing phylogenetic tree
    • Saitou N, Nei M (1987) The neighbor-joining method: a new method for reconstructing phylogenetic tree. Mol Biol Evol 4: 406-425.
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 31
    • 0001023407 scopus 로고
    • Methods for characterization of Streptomyces species
    • Shirling EB, Gottlieb D (1966) Methods for characterization of Streptomyces species. Int J Syst Bacteriol 16: 313-340.
    • (1966) Int J Syst Bacteriol , vol.16 , pp. 313-340
    • Shirling, E.B.1    Gottlieb, D.2
  • 32
    • 0030999171 scopus 로고    scopus 로고
    • Thermoterrabacterium ferrireducens gen. nov., sp. nov., a thermophilic anaerobic dissimilatory Fe(II)-reducing bacterium from a continental hot spring
    • Slobodkin A, Reysenbach AL, Strutz N, Dreier M, Wiegel J (1997) Thermoterrabacterium ferrireducens gen. nov., sp. nov., a thermophilic anaerobic dissimilatory Fe(II)-reducing bacterium from a continental hot spring. Int J Syst Bacteriol 47: 541-547.
    • (1997) Int J Syst Bacteriol , vol.47 , pp. 541-547
    • Slobodkin, A.1    Reysenbach, A.L.2    Strutz, N.3    Dreier, M.4    Wiegel, J.5
  • 33
    • 0028028182 scopus 로고
    • Taxonomic note: a place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology
    • Stackebrandt E, Goebel BM (1994) Taxonomic note: a place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology. Int J Syst Bacteriol 44: 846-849.
    • (1994) Int J Syst Bacteriol , vol.44 , pp. 846-849
    • Stackebrandt, E.1    Goebel, B.M.2
  • 34
    • 0016202002 scopus 로고
    • Simplified approach to identification of aerobic actinomycetes by thin layer chromatography
    • Staneck JL, Roberts GD (1974) Simplified approach to identification of aerobic actinomycetes by thin layer chromatography. Appl Microbiol 28: 226-231.
    • (1974) Appl Microbiol , vol.28 , pp. 226-231
    • Staneck, J.L.1    Roberts, G.D.2
  • 35
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0
    • Tamura K, Dudley J, Nei M, Kumar S (2007) MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4. 0. Mol Biol Evol 24: 1596-1599.
    • (2007) Mol Biol Evol , vol.24 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 36
    • 70350697538 scopus 로고    scopus 로고
    • Saccharopolyspora halophila sp. nov., a novel halophilic actinomycete isolated from a saline lake in China
    • Tang SK, Wang Y, Cai M, Zhi XY, Lou K, Xu LH, Jiang CL, Li WJ (2009a) Saccharopolyspora halophila sp. nov., a novel halophilic actinomycete isolated from a saline lake in China. Int J Syst Evol Microbiol 59: 555-558.
    • (2009) Int J Syst Evol Microbiol , vol.59 , pp. 555-558
    • Tang, S.K.1    Wang, Y.2    Cai, M.3    Zhi, X.Y.4    Lou, K.5    Xu, L.H.6    Jiang, C.L.7    Li, W.J.8
  • 38
    • 0028220240 scopus 로고
    • A phylogenetic analysis of the family Pseudonocardiaceae and the genera Actinokineospora and Saccharothrix with 16S rRNA sequences and a proposal to combine the genera Amycolata and Pseudonocardia in an emended genus Pseudonocardia
    • Warwick ST, Bowen T, McVeigh H, Embley TM (1994) A phylogenetic analysis of the family Pseudonocardiaceae and the genera Actinokineospora and Saccharothrix with 16S rRNA sequences and a proposal to combine the genera Amycolata and Pseudonocardia in an emended genus Pseudonocardia. Int J Syst Bacteriol 44: 293-299.
    • (1994) Int J Syst Bacteriol , vol.44 , pp. 293-299
    • Warwick, S.T.1    Bowen, T.2    McVeigh, H.3    Embley, T.M.4
  • 39
    • 0014047292 scopus 로고
    • Sensitivity of streptomycetes to antibiotics as a taxonomic character
    • Williams ST (1967) Sensitivity of streptomycetes to antibiotics as a taxonomic character. J Gen Microbiol 46: 151-160.
    • (1967) J Gen Microbiol , vol.46 , pp. 151-160
    • Williams, S.T.1
  • 41
  • 42
    • 67649828049 scopus 로고    scopus 로고
    • Saccharopolyspora rosea sp. nov., isolated from a patient with bronchial carcinoma
    • Yassin AF (2009) Saccharopolyspora rosea sp. nov., isolated from a patient with bronchial carcinoma. Int J Syst Evol Microbiol 59: 1148-1152.
    • (2009) Int J Syst Evol Microbiol , vol.59 , pp. 1148-1152
    • Yassin, A.F.1
  • 44
    • 47049103160 scopus 로고    scopus 로고
    • Saccharopolyspora shandongensis sp. nov., isolated from wheat-field soil
    • Zhang JL, Wu DD, Zhang J, Liu ZH, Song F (2008) Saccharopolyspora shandongensis sp. nov., isolated from wheat-field soil. Int J Syst Evol Microbiol 58: 1094-1099.
    • (2008) Int J Syst Evol Microbiol , vol.58 , pp. 1094-1099
    • Zhang, J.L.1    Wu, D.D.2    Zhang, J.3    Liu, Z.H.4    Song, F.5
  • 45
    • 67649795767 scopus 로고    scopus 로고
    • Saccharopolyspora jiangxiensis sp. nov., a novel actinobacterium isolated from grass soil
    • Zhang J, Wu D, Liu Z, Chao F (2009) Saccharopolyspora jiangxiensis sp. nov., a novel actinobacterium isolated from grass soil. Int J Syst Evol Microbiol 59: 1076-1081.
    • (2009) Int J Syst Evol Microbiol , vol.59 , pp. 1076-1081
    • Zhang, J.1    Wu, D.2    Liu, Z.3    Chao, F.4


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