Testing spatiotemporal hypothesis of bacterial evolution using methicillin-resistant staphylococcus aureus ST239 genome-wide data within a bayesian framework

Molecular Biology and Evolution

Volumn 28, Issue 5, 2011, Pages 1593-1603

  Gray, Rebecca R ^a,b   Tatem, Andrew J ^a   Johnson, Judith A ^a,b   Alekseyenko, Alexander V ^c   Pybus, Oliver G ^d   Suchard, Marc A ^e,f   Salemi, Marco ^a,b  

^a UNIVERSITY OF FLORIDA   (United States)

^b UNIVERSITY OF FLORIDA COLLEGE OF MEDICINE   (United States)

^c NEW YORK UNIVERSITY SCHOOL OF MEDICINE   (United States)

^d UNIVERSITY OF OXFORD   (United Kingdom)

^e UNIVERSITY OF CALIFORNIA   (United States)

^f UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

Bayesian inf rence; measurably evolving population; phylogenetics; phylogeography

Indexed keywords

METICILLIN;

ARTICLE; BACTERIAL GENOME; BACTERIAL STRAIN; BAYES THEOREM; GENE SEQUENCE; GENOTYPE; GEOGRAPHIC DISTRIBUTION; GEOGRAPHIC INFORMATION SYSTEM; HEALTH CARE; INFORMATION DISSEMINATION; METHICILLIN RESISTANT STAPHYLOCOCCUS AUREUS; MOLECULAR CLOCK; MOLECULAR EVOLUTION; MOLECULAR PHYLOGENY; NONHUMAN; PHYLOGEOGRAPHY; PROBABILITY; SINGLE NUCLEOTIDE POLYMORPHISM;

BAYES THEOREM; COMMUNICABLE DISEASES; EVOLUTION, MOLECULAR; GENOME-WIDE ASSOCIATION STUDY; HUMANS; LIKELIHOOD FUNCTIONS; MARKOV CHAINS; METHICILLIN-RESISTANT STAPHYLOCOCCUS AUREUS; MODELS, GENETIC; PHYLOGENY; PHYLOGEOGRAPHY; STAPHYLOCOCCAL INFECTIONS;

BACTERIA (MICROORGANISMS); METHICILLIN RESISTANT STAPHYLOCOCCUS AUREUS; STAPHYLOCOCCUS AUREUS;

EID: 79955416536     PISSN: 07374038     EISSN: 15371719     Source Type: Journal    
DOI: 10.1093/molbev/msq319     Document Type: Article

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