-
1
-
-
77950941484
-
Bioinformatics approaches for genomics and post genomics applications of next-generation sequencing
-
Horner, D.S., Pavesi, G., Castrignano, T., Meo, P.D.D., Liuni, S., Sammeth, M., Picardi, E. and Pesole, G. (2009) Bioinformatics approaches for genomics and post genomics applications of next-generation sequencing. Brief. Bioinform., 11, 181-197.
-
(2009)
Brief. Bioinform.
, vol.11
, pp. 181-197
-
-
Horner, D.S.1
Pavesi, G.2
Castrignano, T.3
Meo, P.D.D.4
Liuni, S.5
Sammeth, M.6
Picardi, E.7
Pesole, G.8
-
2
-
-
70249089090
-
Single-molecule sequencing of an individual human genome
-
Pushkarev, D., Neff, N.F. and Quake, S.R. (2009) Single-molecule sequencing of an individual human genome. Nat. Biotechnol., 27, 847-852.
-
(2009)
Nat. Biotechnol.
, vol.27
, pp. 847-852
-
-
Pushkarev, D.1
Neff, N.F.2
Quake, S.R.3
-
3
-
-
33645072440
-
The race for the $1000 genome
-
Service, R.F. (2006) The race for the $1000 genome. Science, 311, 1544-1546.
-
(2006)
Science
, vol.311
, pp. 1544-1546
-
-
Service, R.F.1
-
4
-
-
69749124820
-
The first Korean genome sequence and analysis: Full genome sequencing for asocio-ethnic group
-
Ahn, S.M., Kim, T.H., Lee, S., Kim, D., Ghang, H., Kim, D.S., Kim, B.C., Kim, S.Y., Kim, W.Y., Kim, C. et al. (2009) The first Korean genome sequence and analysis: Full genome sequencing for asocio-ethnic group. Genome Res., 19, 1622-1629.
-
(2009)
Genome Res.
, vol.19
, pp. 1622-1629
-
-
Ahn, S.M.1
Kim, T.H.2
Lee, S.3
Kim, D.4
Ghang, H.5
Kim, D.S.6
Kim, B.C.7
Kim, S.Y.8
Kim, W.Y.9
Kim, C.10
-
5
-
-
42249087308
-
The complete genome of an individual by massively parallel DNA sequencing
-
DOI 10.1038/nature06884, PII NATURE06884
-
Wheeler, D.A., Srinivasan, M., Egholm, M., Shen, Y., Chen, L., McGuire, A., He, W., Chen, Y., Makhijani, V., Roth, G.T. et al. (2008) The complete genome of an individual by massively parallel DNA sequencing. Nature, 452, 872-876. (Pubitemid 351550870)
-
(2008)
Nature
, vol.452
, Issue.7189
, pp. 872-876
-
-
Wheeler, D.A.1
Srinivasan, M.2
Egholm, M.3
Shen, Y.4
Chen, L.5
McGuire, A.6
He, W.7
Chen, Y.-J.8
Makhijani, V.9
Roth, G.T.10
Gomes, X.11
Tartaro, K.12
Niazi, F.13
Turcotte, C.L.14
Irzyk, G.P.15
Lupski, J.R.16
Chinault, C.17
Song, X.-Z.18
Liu, Y.19
Yuan, Y.20
Nazareth, L.21
Qin, X.22
Muzny, D.M.23
Margulies, M.24
Weinstock, G.M.25
Gibbs, R.A.26
Rothberg, J.M.27
more..
-
6
-
-
55549097849
-
The diploid genome sequence of an Asian individual
-
Wang, J., Wang, W., Li, R., Li, Y., Tian, G., Goodman, L., Fan, W., Zhang, J., Li, J., Zhang, J. et al. (2008) The diploid genome sequence of an Asian individual. Nature, 456, 60-66.
-
(2008)
Nature
, vol.456
, pp. 60-66
-
-
Wang, J.1
Wang, W.2
Li, R.3
Li, Y.4
Tian, G.5
Goodman, L.6
Fan, W.7
Zhang, J.8
Li, J.9
Zhang, J.10
-
7
-
-
75549089967
-
The UCSC Genome Browser database: Update
-
Rhead, B., Karolchik, D., Kuhn, R.M., Hinrichs, A.S., Zweig, A.S., Fujita, P., Diekhans, M., Smith, K.E., Rosenbloom, K.R., Raney, B.J. et al. (2010) The UCSC Genome Browser database: update. Nucleic Acids Res., 38, D613-D619.
-
(2010)
Nucleic Acids Res.
, vol.38
-
-
Rhead, B.1
Karolchik, D.2
Kuhn, R.M.3
Hinrichs, A.S.4
Zweig, A.S.5
Fujita, P.6
Diekhans, M.7
Smith, K.E.8
Rosenbloom, K.R.9
Raney, B.J.10
-
8
-
-
2042437650
-
Initial sequencing and analysis of the human genome
-
DOI 10.1038/35057062
-
Lander, E.S., Linton, L.M., Birren, B., Nusbaum, C., Zody, M.C., Baldwin, J., Devon, K., Dewar, K., Doyle, M., FitzHugh, W. et al. (2001) Initial sequencing and analysis of the human genome. Nature, 409, 860-921. (Pubitemid 32165345)
-
(2001)
Nature
, vol.409
, Issue.6822
, pp. 860-921
-
-
Lander, E.S.1
Linton, L.M.2
Birren, B.3
Nusbaum, C.4
Zody, M.C.5
Baldwin, J.6
Devon, K.7
Dewar, K.8
Doyle, M.9
Fitzhugh, W.10
-
9
-
-
77649121204
-
Personal genome sequencing: Current approaches and challenges
-
Snyder, M., Du, J. and Gerstein, M. (2010) Personal genome sequencing: current approaches and challenges. Genes Dev., 24, 423-431.
-
(2010)
Genes Dev.
, vol.24
, pp. 423-431
-
-
Snyder, M.1
Du, J.2
Gerstein, M.3
-
10
-
-
67649855126
-
Data structures and compression algorithms for genomic sequence data
-
Brandon, M.C., Wallace, D.C. and Baldi, P. (2009) Data structures and compression algorithms for genomic sequence data. Bioinformatics, 25, 1731-1738.
-
(2009)
Bioinformatics
, vol.25
, pp. 1731-1738
-
-
Brandon, M.C.1
Wallace, D.C.2
Baldi, P.3
-
11
-
-
58349097721
-
Human genomes as email attachments
-
Christley, S., Lu, Y., Li, C. and Xie, X. (2009) Human genomes as email attachments. Bioinformatics, 25, 274-275.
-
(2009)
Bioinformatics
, vol.25
, pp. 274-275
-
-
Christley, S.1
Lu, Y.2
Li, C.3
Xie, X.4
-
12
-
-
77955886068
-
G-SQZ: Compact encoding of genomic sequence and quality data
-
Tembe, W., Lowey, J. and Suh, E. (2010) G-SQZ: compact encoding of genomic sequence and quality data. Bioinformatics, 26, 2192-2194.
-
(2010)
Bioinformatics
, Issue.26
, pp. 2192-2194
-
-
Tembe, W.1
Lowey, J.2
Suh, E.3
-
13
-
-
70350645184
-
A Lossless Compression Algorithm for DNA sequences
-
Soliman, T.H., Gharib, T.F., Abo-Alian, A. and Sharkawy, M.E. (2009) A Lossless Compression Algorithm for DNA sequences. Int. J. Bioinform. Res. Appl., 5, 593-602.
-
(2009)
Int. J. Bioinform. Res. Appl.
, vol.5
, pp. 593-602
-
-
Soliman, T.H.1
Gharib, T.F.2
Abo-Alian, A.3
Sharkawy, M.E.4
-
14
-
-
0035180589
-
The Arabidopsis Information Resource (TAIR): A comprehensive database and web-based information retrieval, analysis, and visualization system for a model plant
-
Huala, E., Dickerman, A., Garcia-Hernandez, M., Weems, D., Reiser, L., LaFond, F., Hanley, D., Kiphart, D., Zhuang, J., Huang, W. et al. (2001) The Arabidopsis Information Resource (TAIR): A comprehensive database and web-based information retrieval, analysis, and visualization system for a model plant. Nucleic Acids Res., 29, 102-105. (Pubitemid 32062974)
-
(2001)
Nucleic Acids Research
, vol.29
, Issue.1
, pp. 102-105
-
-
Huala, E.1
Dickerman, A.W.2
Garcia-Hernandez, M.3
Weems, D.4
Reiser, L.5
LaFond, F.6
Hanley, D.7
Kiphart, D.8
Zhuang, M.9
Huang, W.10
Mueller, L.A.11
Bhattacharyya, D.12
Bhaya, D.13
Sobral, B.W.14
Beavis, W.15
Meinke, D.W.16
Town, C.D.17
Somerville, C.18
Rhee, S.Y.19
-
15
-
-
33846101405
-
The TIGR Rice Genome Annotation Resource: Improvements and new features
-
DOI 10.1093/nar/gkl976
-
Ouyang, S., Zhu, W., Hamilton, J., Lin, H., Campbell, M., Childs, K., Thibaud-Nissen, F., Malek, R.L., Lee, Y., Zheng, L. et al. (2007) The TIGR Rice Genome Annotation Resource: improvements and new features. Nucleic Acids Res., 35, D883-D887. (Pubitemid 46056327)
-
(2007)
Nucleic Acids Research
, vol.35
, Issue.SUPPL. 1
-
-
Ouyang, S.1
Zhu, W.2
Hamilton, J.3
Lin, H.4
Campbell, M.5
Childs, K.6
Thibaud-Nissen, F.7
Malek, R.L.8
Lee, Y.9
Zheng, L.10
Orvis, J.11
Haas, B.12
Wortman, J.13
Buell, R.C.14
-
16
-
-
0037249498
-
The Arabidopsis Information Resource (TAIR): A model organism database providing a centralized, curated gateway to Arabidopsis biology, research materials and community
-
DOI 10.1093/nar/gkg076
-
Rhee, SY., Beavis, W., Berardini, T.Z., Chen, G., Dixon, D., Doyle, A., Garcia-Hernandez, M., Huala, E., Lander, G., Montoya, M. et al. (2003) The Arabidopsis Information Resource (TAIR): a model organism database providing a centralized, curated gateway to Arabidopsis biology, research materials and community. Nucleic Acids Res., 31, 224-228. (Pubitemid 36150370)
-
(2003)
Nucleic Acids Research
, vol.31
, Issue.1
, pp. 224-228
-
-
Rhee, S.Y.1
Beavis, W.2
Berardini, T.Z.3
Chen, G.4
Dixon, D.5
Doyle, A.6
Garcia-Hernandez, M.7
Huala, E.8
Lander, G.9
Montoya, M.10
Miller, N.11
Mueller, L.A.12
Mundodi, S.13
Reiser, L.14
Tacklind, J.15
Weems, D.C.16
Wu, Y.17
Xu, I.18
Yoo, D.19
Yoon, J.20
Zhang, P.21
more..
-
17
-
-
0023012946
-
An O(ND) difference algorithm and its variations
-
Myers, E.W. (1986) An O(ND) Difference Algorithm and Its Variations. Algorithmica, 1, 251-266.
-
(1986)
Algorithmica
, vol.1
, pp. 251-266
-
-
Myers, E.W.1
-
19
-
-
84938015047
-
A method for the construction of minimum redundancy codes
-
Huffman, D. (1952) A method for the construction of minimum redundancy codes. Proc IRE, 40, 1098-1101.
-
(1952)
Proc IRE
, vol.40
, pp. 1098-1101
-
-
Huffman, D.1
-
20
-
-
35348983887
-
A second generation human haplotype map of over 3.1 million SNPs
-
Frazer, KA., Ballinger, D.G., Cox, D.R., Hinds, DA., Stuve, L.L., Gibbs, R.A., Belmont, J.W., Boudreau, A., Hardenbol, P., Leal, S.M. et al. (2007) A second generation human haplotype map of over 3.1 million SNPs. Nature, 449, 851-862.
-
(2007)
Nature
, vol.449
, pp. 851-862
-
-
Frazer, K.A.1
Ballinger, D.G.2
Cox, D.R.3
Hinds, D.A.4
Stuve, L.L.5
Gibbs, R.A.6
Belmont, J.W.7
Boudreau, A.8
Hardenbol, P.9
Leal, S.M.10
-
21
-
-
38549161042
-
DNA sequencing: A plan to capture human diversity in 1000 genomes
-
DOI 10.1126/science.319.5862.395
-
Kaiser, J. (2008) A plan to capture human diversity in 1000 genomes. Science, 319, 395. (Pubitemid 351160548)
-
(2008)
Science
, vol.319
, Issue.5862
, pp. 395
-
-
Kaiser, J.1
|