"Proteomineering" serum biomarkers. A Study in Scarlet

Electrophoresis

Volumn 32, Issue 9, 2011, Pages 976-980

  Di Girolamo, Francesco ^a   Bala, Kumar ^b   Chung, Maxey C M ^c   Righetti, Pier Giorgio ^a  

^a POLITECNICO DI MILANO   (Italy)

^b BIO RAD LABORATORIES   (United States)

^c NATIONAL UNIVERSITY OF SINGAPORE   (Singapore)

Author keywords

Biomarkers; Combinatorial peptide ligand libraries; Elution protocols; Low abundance proteome; Sera

Indexed keywords

ACETIC ACID; BIOMARKERS; BODY FLUIDS; LIBRARIES; LIGANDS; METABOLISM; MOLECULAR BIOLOGY; PEPTIDES; PH;

COMBINATORIAL PEPTIDE LIGAND LIBRARY; ELUTION PROTOCOL; LIGAND LIBRARY; LOW-ABUNDANCE PROTEOME; PEPTIDE LIGAND; PERFORMANCE; PRE-TREATMENTS; PROTEOMICS; SERUM; SERUM BIOMARKERS;

UREA;

3 [(3 CHOLAMIDOPROPYL)DIMETHYLAMMONIO] 1 PROPANESULFONIC ACID; ACETIC ACID; DODECYL SULFATE SODIUM; UREA;

ARTICLE; COMBINATORIAL LIBRARY; DISEASE MARKER; ELUTION; MATRIX ASSISTED LASER DESORPTION IONIZATION TIME OF FLIGHT MASS SPECTROMETRY; POLYACRYLAMIDE GEL ELECTROPHORESIS; PROTEOMICS;

EID: 79954469741     PISSN: 01730835     EISSN: 15222683     Source Type: Journal    
DOI: 10.1002/elps.201000695     Document Type: Article

References (27)

1. Knowles, M. R., Cervino, S., Skynner, H. A., Hunt, S. P., de Felipe, C., Salim, K., Meneses-Lorente, G., McAllister, G., Guest, P. C., Proteomics 2003, 3, 1162-1171.
2. Washburn, M. P., Wolters, D., Yates, J. R., 3rd, Nat. Biotechnol. 2001, 19, 242-247.
3. Nesvizhskii, A. I., Vitek, O., Aebersold, R., Nat. Methods 2007, 4, 787-797.
4. Mitchell, P., Nat. Biotechol. 2010, 28, 665-670.
5. Fang, X., Zhang, W. W., J. Proteomics 2008, 71, 284-303.
6. Righetti, P. G., Boschetti, E., Mass Spectrom. Rev. 2008, 27, 596-608.
7. Boschetti, E., Righetti, P. G., Proteomics 2009, 9, 1492-1510.
8. Righetti, P. G., Boschetti, E., Kravchuk, A. V., Fasoli, E., Expert Rev. Proteomics 2010, 7, 373-385.
9. Roux-Dalvai, F., Gonzalez de Peredo, A., Simó, C., Guerrier, L., Bouyssie, D., Zanella, A., Citterio, A., Burlet-Schiltz, O., Boschetti, E., Righetti, P. G., Monsarrat, B., Mol. Cell. Proteomics 2008, 7, 2254-2269.
10. Mouton-Barbosa, E., Roux-Dalvai, F., Bouyssié, D., Berger, F., Schmidt, E., Righetti, P. G., Guerrier, L., Boschetti, E., Burlet-Schiltz, O., Gonzalez de Peredo, A., Monsarrat, B., Mol. Cell. Proteomics 2010, 9, 1006-1021.
11. Tu, C., Rudnick, P. A., Martinez, M. Y., Cheek, K. L., Stein, S. E., Slebos, R. J., Liebler, D. C., J. Proteome Res. 2010, 9, 4982-4991.
12. Zhi, W., Purohit, S., Carey, C., Wang, M., She, J. X., J. Diabetes Sci. Technol. 2010, 4, 993-1002.
13. Bandow, J. E., Proteomics 2010, 10, 1416-1425.
14. Dwivedi, R. C., Krokhin, O. V., Cortens, J. P., Wilkins, J. A., J. Proteome Res. 2010, 9, 1144-1149.
15. Ernoult, E., Bourreau, A., Gamelin, E., Guette, C., J. Biomed. Biotech. 2010, 2010, 927917.
16. Sihlbom, C., Kanmert, I., von Bahr, H., Davidsson, P., J. Proteome Res. 2008, 7, 4191-4198.
17. Fakelman, F., Felix, K., Buechler, M. W., Werner, J., Arch. Physiol. Biochem. 2010, 116, 208-217.
18. Froebel, J., Hartwig, S., Passlack, W., Eckel, J., Haas, R., Czibere, A., Lehr, S., Arch. Physiol. Biochem. 2010, 116, 174-180.
19. Beseme, O., Fertin, M., Drobecq, H., Amouyel, P., Pinet, F., Electrophoresis 2010, 31, 2697-2704.
20. De Bock, M., de Seny, D., Meuwis, M. A., Servais, A. M., Minh, T. Q., Closset, J., Chapelle, J. P., Louis, E., Malaise, M., Merville, M. P., Fillet, M., Talanta 2010, 82, 245-254.
21. Bandhakavi, S., Van Riper, S. K., Tawfik, P., Stone, M. D., Haddad, T., Rhodus, N., Carlis, J. V., Griffin, T. J., J. Proteome Res. 2009, 8, 5590-5600.
22. Candiano, G., Dimuccio, V., Bruschi, M., Santucci, L., Gusmano, R., Boschetti, E., Righetti, P. G., Ghiggeri, G. M., Electrophoresis 2009, 30, 2405-2411.
23. Zhang, Y., Li, Y., Qiu, F., Qiu, Z., Electrophoresis 2010, 31, 3797-3807.
24. Goldenberg, D. P., in: Creighton, T. E. (Ed.), Protein Structure: A Practical Approach, IRL Press, Oxford 1989, pp. 225-250.
25. Righetti, P. G., Boschetti, E., Lomas, L., Citterio, A., Proteomics 2006, 6, 3980-3992.
26. Li, L., Sun, C. J., Freeby, S., Yee, D., Kieffer-Jaquinod, S., Guerrier, L., Boschetti, E., Lomas, L., J. Proteomics Bioinformatics 2009, 2, 485-494.
27. Colzani, M., Waridel, P., Laurent, J., Faes, E., Rüegg, C., Quadroni, M., J. Proteome Res. 2009, 8, 4779-4788.