메뉴 건너뛰기




Volumn 77, Issue 7, 2011, Pages 2247-2253

Genetic diversity of O-antigen biosynthesis regions in Vibrio cholerae

Author keywords

[No Author keywords available]

Indexed keywords

BIOSYNTHESIS GENES; GENE CONTENT; GENE ORDERS; GENETIC DIVERSITY; O-ANTIGEN; O-ANTIGEN GENES; SEROGROUPS; VIBRIO CHOLERAE;

EID: 79953292311     PISSN: 00992240     EISSN: 10985336     Source Type: Journal    
DOI: 10.1128/AEM.01663-10     Document Type: Article
Times cited : (32)

References (46)
  • 1
    • 0027530843 scopus 로고
    • Large outbreak of clinical cholera due to Vibrio cholerae non-O1 in Bangladesh
    • Albert, M. J., et al. 1993. Large outbreak of clinical cholera due to Vibrio cholerae non-O1 in Bangladesh. Lancet 341:704.
    • (1993) Lancet , vol.341 , pp. 704
    • Albert, M.J.1
  • 2
    • 0030801002 scopus 로고    scopus 로고
    • Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
    • Altschul, S. F., et al. 1997. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25:3389-3402.
    • (1997) Nucleic Acids Res , vol.25 , pp. 3389-3402
    • Altschul, S.F.1
  • 3
    • 0011542799 scopus 로고    scopus 로고
    • The Pfam protein families database
    • Bateman, A., E. Birney, et al. 2002. The Pfam protein families database. Nucleic Acids Res. 30:276-280.
    • (2002) Nucleic Acids Res , vol.30 , pp. 276-280
    • Bateman, A.1    Birney, E.2
  • 4
    • 33645774644 scopus 로고    scopus 로고
    • Genetic analysis of the capsular biosynthetic locus from all 90 pneumococcal serotypes
    • Bentley, S. D., et al. 2006. Genetic analysis of the capsular biosynthetic locus from all 90 pneumococcal serotypes. PLoS Genet 2:e31.
    • (2006) PLoS Genet , vol.2
    • Bentley, S.D.1
  • 5
    • 0028847868 scopus 로고
    • Genesis of the novel epidemic Vibrio cholerae O139 strain: evidence for horizontal transfer of genes involved in polysaccharide synthesis
    • Bik, E. M., et al. 1995. Genesis of the novel epidemic Vibrio cholerae O139 strain: evidence for horizontal transfer of genes involved in polysaccharide synthesis. EMBO J. 14:209-216.
    • (1995) EMBO J , vol.14 , pp. 209-216
    • Bik, E.M.1
  • 6
    • 34347354390 scopus 로고    scopus 로고
    • Serogroup conversion of Vibrio cholerae in aquatic reservoirs
    • Blokesch, M., and G. K. Schoolnik. 2007. Serogroup conversion of Vibrio cholerae in aquatic reservoirs. PLoS Pathog. 3:e81.
    • (2007) PLoS Pathog , vol.3
    • Blokesch, M.1    Schoolnik, G.K.2
  • 7
    • 76849085872 scopus 로고    scopus 로고
    • VEJφ, a novel filamentous phage of Vibrio cholerae able to transduce the cholera toxin genes
    • Campos, J., E. Martinez, et al. 2010. VEJφ, a novel filamentous phage of Vibrio cholerae able to transduce the cholera toxin genes. Microbiology 156(Pt 1):108-115.
    • (2010) Microbiology , vol.156 , Issue.PART 1 , pp. 108-115
    • Campos, J.1    Martinez, E.2
  • 8
    • 4644230558 scopus 로고    scopus 로고
    • Lipopolysaccharides of Vibrio cholerae II. Genetics of biosynthesis
    • Chatterjee, S. N., and K. Chaudhuri. 2004. Lipopolysaccharides of Vibrio cholerae II. Genetics of biosynthesis. Biochim. Biophys. Acta 1690:93-109.
    • (2004) Biochim. Biophys. Acta , vol.1690 , pp. 93-109
    • Chatterjee, S.N.1    Chaudhuri, K.2
  • 9
    • 34047272337 scopus 로고    scopus 로고
    • The capsule polysaccharide structure and biogenesis for non-O1 Vibrio cholerae NRT36S: genes are embedded in the LPS region
    • Chen, Y., et al. 2007. The capsule polysaccharide structure and biogenesis for non-O1 Vibrio cholerae NRT36S: genes are embedded in the LPS region. BMC Microbiol. 7:20.
    • (2007) BMC Microbiol , vol.7 , pp. 20
    • Chen, Y.1
  • 10
    • 0042121237 scopus 로고    scopus 로고
    • Multiple sequence alignment with the Clustal series of programs
    • Chenna, R., et al. 2003. Multiple sequence alignment with the Clustal series of programs. Nucleic Acids Res. 31:3497-3500.
    • (2003) Nucleic Acids Res , vol.31 , pp. 3497-3500
    • Chenna, R.1
  • 11
    • 70349304423 scopus 로고    scopus 로고
    • Comparative genomics reveals mechanism for shortterm and long-term clonal transitions in pandemic Vibrio cholerae
    • Chun, J., et al. 2009. Comparative genomics reveals mechanism for shortterm and long-term clonal transitions in pandemic Vibrio cholerae. Proc. Natl. Acad. Sci. U. S. A. 106:15442-15447.
    • (2009) Proc. Natl. Acad. Sci. U. S. A. , vol.106 , pp. 15442-15447
    • Chun, J.1
  • 12
    • 0030028259 scopus 로고    scopus 로고
    • Cloning and sequence of a region encoding a surface polysaccharide of Vibrio cholerae O139 and characterization of the insertion site in the chromosome of Vibrio cholerae O1
    • Comstock, L. E., et al. 1996. Cloning and sequence of a region encoding a surface polysaccharide of Vibrio cholerae O139 and characterization of the insertion site in the chromosome of Vibrio cholerae O1. Mol. Microbiol. 19:815-826.
    • (1996) Mol. Microbiol. , vol.19 , pp. 815-826
    • Comstock, L.E.1
  • 13
    • 0031589610 scopus 로고    scopus 로고
    • Structural analysis of the lipopolysaccharide from Vibrio cholerae serotype O22
    • Cox, A. D., et al. 1997. Structural analysis of the lipopolysaccharide from Vibrio cholerae serotype O22. Carbohydr. Res. 304:191-208.
    • (1997) Carbohydr. Res. , vol.304 , pp. 191-208
    • Cox, A.D.1
  • 14
    • 0032125253 scopus 로고    scopus 로고
    • Vibrio cholerae O22 might be a putative source of exogenous DNA resulting in the emergence of the new strain of Vibrio cholerae O139
    • Dumontier, S., and P. Berche. 1998. Vibrio cholerae O22 might be a putative source of exogenous DNA resulting in the emergence of the new strain of Vibrio cholerae O139. FEMS Microbiol. Lett. 164:91-98.
    • (1998) FEMS Microbiol. Lett. , vol.164 , pp. 91-98
    • Dumontier, S.1    Berche, P.2
  • 15
    • 0037022337 scopus 로고    scopus 로고
    • Comparative genomic analysis of Vibrio cholerae: genes that correlate with cholera endemic and pandemic disease
    • Dziejman, M., et al. 2002. Comparative genomic analysis of Vibrio cholerae: genes that correlate with cholera endemic and pandemic disease. Proc. Natl. Acad. Sci. U. S. A. 99:1556-1561.
    • (2002) Proc. Natl. Acad. Sci. U. S. A. , vol.99 , pp. 1556-1561
    • Dziejman, M.1
  • 16
    • 0031978181 scopus 로고    scopus 로고
    • Base-calling of automated sequencer traces using phred. II. Error probabilities
    • Ewing, B., and P. Green. 1998. Base-calling of automated sequencer traces using phred. II. Error probabilities. Genome Res. 8:186-194.
    • (1998) Genome Res , vol.8 , pp. 186-194
    • Ewing, B.1    Green, P.2
  • 17
    • 0031955518 scopus 로고    scopus 로고
    • Base-calling of automated sequencer traces using phred. I. Accuracy assessment
    • Ewing, B., et al. 1998. Base-calling of automated sequencer traces using phred. I. Accuracy assessment. Genome Res. 8:175-185.
    • (1998) Genome Res , vol.8 , pp. 175-185
    • Ewing, B.1
  • 18
    • 0031792685 scopus 로고    scopus 로고
    • Epidemiology, genetics, and ecology of toxigenic Vibrio cholerae
    • Faruque, S. M., et al. 1998. Epidemiology, genetics, and ecology of toxigenic Vibrio cholerae. Microbiol. Mol. Biol. Rev. 62:1301-1314.
    • (1998) Microbiol. Mol. Biol. Rev. , vol.62 , pp. 1301-1314
    • Faruque, S.M.1
  • 19
    • 13444255983 scopus 로고    scopus 로고
    • Seasonal epidemics of cholera inversely correlate with the prevalence of environmental cholera phages
    • Faruque, S. M., et al. 2005. Seasonal epidemics of cholera inversely correlate with the prevalence of environmental cholera phages. Proc. Natl. Acad. Sci. U. S. A. 102:1702-1707.
    • (2005) Proc. Natl. Acad. Sci. U. S. A. , vol.102 , pp. 1702-1707
    • Faruque, S.M.1
  • 20
    • 47849095169 scopus 로고    scopus 로고
    • Lateral gene transfer of O1 serogroup encoding genes of Vibrio cholerae
    • González-Fraga, S., et al. 2008. Lateral gene transfer of O1 serogroup encoding genes of Vibrio cholerae. FEMS Microbiol. Lett. 286:32-38.
    • (2008) FEMS Microbiol. Lett. , vol.286 , pp. 32-38
    • González-Fraga, S.1
  • 21
    • 0034957021 scopus 로고    scopus 로고
    • Isolation and characterization of a temperature-sensitive generalized transducing bacteriophage for Vibrio cholerae
    • Hava, D. L., and A. Camilli. 2001. Isolation and characterization of a temperature-sensitive generalized transducing bacteriophage for Vibrio cholerae. J. Microbiol. Methods 46:217-225.
    • (2001) J. Microbiol. Methods , vol.46 , pp. 217-225
    • Hava, D.L.1    Camilli, A.2
  • 22
    • 0027908713 scopus 로고
    • Structural studies of the Vibrio cholerae O:5 O-antigen polysaccharide
    • Hermansson, K., P.-E. Jansson, T. Holme, and B. Gustavsson. 1993. Structural studies of the Vibrio cholerae O:5 O-antigen polysaccharide. Carbohydr. Res. 248:199-211.
    • (1993) Carbohydr. Res. , vol.248 , pp. 199-211
    • Hermansson, K.1    Jansson, P.-E.2    Holme, T.3    Gustavsson, B.4
  • 23
    • 0028318945 scopus 로고
    • The JUMPstart sequence: a 39 bp element common to several polysaccharide gene clusters
    • Hobbs, M., and P. R. Reeves. 1994. The JUMPstart sequence: a 39 bp element common to several polysaccharide gene clusters. Mol. Microbiol. 12:855-856.
    • (1994) Mol. Microbiol. , vol.12 , pp. 855-856
    • Hobbs, M.1    Reeves, P.R.2
  • 24
    • 30744470609 scopus 로고    scopus 로고
    • Application of phylogenetic networks in evolutionary studies
    • Huson, D. H., and D. Bryant. 2006. Application of phylogenetic networks in evolutionary studies. Mol. Biol. Evol. 23:254-267.
    • (2006) Mol. Biol. Evol. , vol.23 , pp. 254-267
    • Huson, D.H.1    Bryant, D.2
  • 25
    • 0025980642 scopus 로고
    • Structure and sequence of the rfb (O antigen) gene cluster of Salmonella serovar typhimurium (strain LT2)
    • Jiang, X. M., et al. 1991. Structure and sequence of the rfb (O antigen) gene cluster of Salmonella serovar typhimurium (strain LT2). Mol. Microbiol. 5:695-713.
    • (1991) Mol. Microbiol. , vol.5 , pp. 695-713
    • Jiang, X.M.1
  • 26
    • 0035835002 scopus 로고    scopus 로고
    • Structural studies of the O-specific polysaccharide of Vibrio cholerae O8 using solvolysis with triflic acid
    • Kocharova, N. A., et al. 2001. Structural studies of the O-specific polysaccharide of Vibrio cholerae O8 using solvolysis with triflic acid. Carbohydr. Res. 330:83-92.
    • (2001) Carbohydr. Res. , vol.330 , pp. 83-92
    • Kocharova, N.A.1
  • 27
    • 0024466135 scopus 로고
    • Sugar composition of the polysaccharide portion of lipopolysaccharides isolated from non-O1 Vibrio cholerae O2 to O41, O44, and O68
    • Kondo, S., and K. Hisatsune. 1989. Sugar composition of the polysaccharide portion of lipopolysaccharides isolated from non-O1 Vibrio cholerae O2 to O41, O44, and O68. Microbiol. Immunol. 33:641-648.
    • (1989) Microbiol. Immunol. , vol.33 , pp. 641-648
    • Kondo, S.1    Hisatsune, K.2
  • 28
    • 0031052170 scopus 로고    scopus 로고
    • A chemical study of the sugar composition of the polysaccharide portion of lipopolysaccharides isolated from Vibrio cholerae non-01 from O2 to O155
    • Kondo, S., Y. Kawamata, Y. Sano, T. Iguchi, and K. Hisatsune. 1997. A chemical study of the sugar composition of the polysaccharide portion of lipopolysaccharides isolated from Vibrio cholerae non-01 from O2 to O155. Syst. Appl. Microbiol. 20:1-11.
    • (1997) Syst. Appl. Microbiol. , vol.20 , pp. 1-11
    • Kondo, S.1    Kawamata, Y.2    Sano, Y.3    Iguchi, T.4    Hisatsune, K.5
  • 29
    • 0141814840 scopus 로고    scopus 로고
    • The variation of dTDP-L-rhamnose pathway genes in Vibrio cholerae
    • Li, Q., M. Hobbs, et al. 2003. The variation of dTDP-L-rhamnose pathway genes in Vibrio cholerae. Microbiology 149(Pt 9):2463-2474.
    • (2003) Microbiology , vol.149 , Issue.PART 9 , pp. 2463-2474
    • Li, Q.1    Hobbs, M.2
  • 30
    • 0029040357 scopus 로고
    • Putative O-antigen transport genes within the rfb region of Vibrio cholerae O1 are homologous to those for capsule transport
    • Manning, P. A., et al. 1995. Putative O-antigen transport genes within the rfb region of Vibrio cholerae O1 are homologous to those for capsule transport. Gene 158:1-7.
    • (1995) Gene , vol.158 , pp. 1-7
    • Manning, P.A.1
  • 31
    • 0030957827 scopus 로고    scopus 로고
    • The evolution of epidemic Vibrio cholerae strains
    • Mooi, F. R., and E. M. Bik. 1997. The evolution of epidemic Vibrio cholerae strains. Trends Microbiol. 5:161-165.
    • (1997) Trends Microbiol , vol.5 , pp. 161-165
    • Mooi, F.R.1    Bik, E.M.2
  • 32
    • 0027931805 scopus 로고
    • Spread of Vibrio cholerae O139 Bengal in India
    • Nair, G. B., et al. 1994. Spread of Vibrio cholerae O139 Bengal in India. J. Infect. Dis. 169:1029-1034.
    • (1994) J. Infect. Dis. , vol.169 , pp. 1029-1034
    • Nair, G.B.1
  • 33
    • 0033821209 scopus 로고    scopus 로고
    • Characterization of Vibrio cholerae O1 antigen as the bacteriophage K139 receptor and identification of IS1004 insertions aborting O1 antigen biosynthesis
    • Nesper, J., et al. 2000. Characterization of Vibrio cholerae O1 antigen as the bacteriophage K139 receptor and identification of IS1004 insertions aborting O1 antigen biosynthesis. J. Bacteriol. 182:5097-5104.
    • (2000) J. Bacteriol. , vol.182 , pp. 5097-5104
    • Nesper, J.1
  • 34
    • 0027380354 scopus 로고
    • Virulence patterns of Vibrio cholerae non-O1 strains isolated from hospitalised patients with acute diarrhoea in Calcutta, India
    • Ramamurthy, T., et al. 1993. Virulence patterns of Vibrio cholerae non-O1 strains isolated from hospitalised patients with acute diarrhoea in Calcutta, India. J. Med. Microbiol. 39:310-317.
    • (1993) J. Med. Microbiol. , vol.39 , pp. 310-317
    • Ramamurthy, T.1
  • 35
    • 0027404409 scopus 로고
    • Evolution of Salmonella O antigen variation by interspecific gene transfer on a large scale
    • Reeves, P. 1993. Evolution of Salmonella O antigen variation by interspecific gene transfer on a large scale. Trends Genet. 9:17-22.
    • (1993) Trends Genet , vol.9 , pp. 17-22
    • Reeves, P.1
  • 36
    • 0036127023 scopus 로고    scopus 로고
    • Genomic organization of LPS-specific loci
    • Reeves, P. P., and L. Wang. 2002. Genomic organization of LPS-specific loci. Curr. Top. Microbiol. Immunol. 264:109-135.
    • (2002) Curr. Top. Microbiol. Immunol. , vol.264 , pp. 109-135
    • Reeves, P.P.1    Wang, L.2
  • 37
    • 0345097432 scopus 로고    scopus 로고
    • Biosynthesis of O-antigens: genes and pathways involved in nucleotide sugar precursor synthesis and O-antigen assembly
    • Samuel, G., and P. Reeves. 2003. Biosynthesis of O-antigens: genes and pathways involved in nucleotide sugar precursor synthesis and O-antigen assembly. Carbohydr. Res. 338:2503-2519.
    • (2003) Carbohydr. Res. , vol.338 , pp. 2503-2519
    • Samuel, G.1    Reeves, P.2
  • 38
    • 0344809960 scopus 로고    scopus 로고
    • Cloning and sequencing of the genes downstream of the wbf gene cluster of Vibrio cholerae serogroup O139 and analysis of the junction genes in other serogroups
    • Sozhamannan, S., et al. 1999. Cloning and sequencing of the genes downstream of the wbf gene cluster of Vibrio cholerae serogroup O139 and analysis of the junction genes in other serogroups. Infect. Immun. 67:5033-5040.
    • (1999) Infect. Immun. , vol.67 , pp. 5033-5040
    • Sozhamannan, S.1
  • 39
    • 0022410317 scopus 로고
    • Statistical methods of DNA sequence analysis: detection of intragenic recombination or gene conversion
    • Stephens, J. C. 1985. Statistical methods of DNA sequence analysis: detection of intragenic recombination or gene conversion. Mol. Biol. Evol. 2:539-556.
    • (1985) Mol. Biol. Evol. , vol.2 , pp. 539-556
    • Stephens, J.C.1
  • 40
    • 0034442825 scopus 로고    scopus 로고
    • Phylogeny of Vibrio cholerae based on recA sequence
    • Stine, O. C., et al. 2000. Phylogeny of Vibrio cholerae based on recA sequence. Infect. Immun. 68:7180-7185.
    • (2000) Infect. Immun. , vol.68 , pp. 7180-7185
    • Stine, O.C.1
  • 41
    • 0028877375 scopus 로고
    • Genetic rearrangements in the rfb regions of Vibrio cholerae O1 and O139
    • Stroeher, U. H., et al. 1995. Genetic rearrangements in the rfb regions of Vibrio cholerae O1 and O139. Proc. Natl. Acad. Sci. U. S. A. 92:10374-10378.
    • (1995) Proc. Natl. Acad. Sci. U. S. A. , vol.92 , pp. 10374-10378
    • Stroeher, U.H.1
  • 43
    • 53349101866 scopus 로고    scopus 로고
    • Severe diarrhea caused by cholera toxinproducing Vibrio cholerae serogroup O75 infections acquired in the southeastern United States
    • Tobin-D'Angelo, M., et al. 2008. Severe diarrhea caused by cholera toxinproducing Vibrio cholerae serogroup O75 infections acquired in the southeastern United States. Clin. Infect. Dis. 47:1035-1040.
    • (2008) Clin. Infect. Dis. , vol.47 , pp. 1035-1040
    • Tobin-D'Angelo, M.1
  • 44
    • 0028172043 scopus 로고
    • The Vibrio cholerae O139 serogroup antigen includes an O-antigen capsule and lipopolysaccharide virulence determinants
    • Waldor, M. K., et al. 1994. The Vibrio cholerae O139 serogroup antigen includes an O-antigen capsule and lipopolysaccharide virulence determinants. Proc. Natl. Acad. Sci. U. S. A. 91:11388-11392.
    • (1994) Proc. Natl. Acad. Sci. U. S. A. , vol.91 , pp. 11388-11392
    • Waldor, M.K.1
  • 45
    • 0033022996 scopus 로고    scopus 로고
    • Structure, assembly and regulation of expression of capsules in Escherichia coli
    • Whitfield, C., and I. S. Roberts. 1999. Structure, assembly and regulation of expression of capsules in Escherichia coli. Mol. Microbiol. 31:1307-1319.
    • (1999) Mol. Microbiol. , vol.31 , pp. 1307-1319
    • Whitfield, C.1    Roberts, I.S.2
  • 46
    • 0032871197 scopus 로고    scopus 로고
    • The genes responsible for O-antigen synthesis of vibrio cholerae O139 are closely related to those of Vibrio cholerae O22
    • Yamasaki, S., et al. 1999. The genes responsible for O-antigen synthesis of vibrio cholerae O139 are closely related to those of Vibrio cholerae O22. Gene 237:321-332.
    • (1999) Gene , vol.237 , pp. 321-332
    • Yamasaki, S.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.