-
1
-
-
0026576063
-
Evolution and ecology of influenza A viruses
-
372859, 1579108
-
Webster RG, Bean WJ, Gorman OT, Chambers TM, Kawaoka Y. Evolution and ecology of influenza A viruses. Microbiol Rev 1992, 56:152-179. 372859, 1579108.
-
(1992)
Microbiol Rev
, vol.56
, pp. 152-179
-
-
Webster, R.G.1
Bean, W.J.2
Gorman, O.T.3
Chambers, T.M.4
Kawaoka, Y.5
-
2
-
-
0037468827
-
Ecological and immunological determinants of influenza evolution
-
10.1038/nature01509, 12660783
-
Ferguson N, Galvani A, Bush R. Ecological and immunological determinants of influenza evolution. Nature 2003, 422(6930):428-33. 10.1038/nature01509, 12660783.
-
(2003)
Nature
, vol.422
, Issue.6930
, pp. 428-433
-
-
Ferguson, N.1
Galvani, A.2
Bush, R.3
-
3
-
-
33845879635
-
Epochal evolution shapes the phylodynamics of interpandemic influenza A (H3N2) in humans
-
10.1126/science.1132745, 17185596
-
Koelle K, Cobey S, Grenfell BT, Pascual M. Epochal evolution shapes the phylodynamics of interpandemic influenza A (H3N2) in humans. Science 2006, 314:1898-1903. 10.1126/science.1132745, 17185596.
-
(2006)
Science
, vol.314
, pp. 1898-1903
-
-
Koelle, K.1
Cobey, S.2
Grenfell, B.T.3
Pascual, M.4
-
4
-
-
0017804579
-
Intestinal influenza: replication and characterization of influenza viruses in ducks
-
10.1016/0042-6822(78)90247-7, 23604
-
Webster RG, Yakhno M, Hinshaw VS, Bean WJ, Murti KG. Intestinal influenza: replication and characterization of influenza viruses in ducks. Virology 1978, 84(2):268-278. 10.1016/0042-6822(78)90247-7, 23604.
-
(1978)
Virology
, vol.84
, Issue.2
, pp. 268-278
-
-
Webster, R.G.1
Yakhno, M.2
Hinshaw, V.S.3
Bean, W.J.4
Murti, K.G.5
-
5
-
-
33646033777
-
Global Patterns of influenza A Virus in Wild Birds
-
10.1126/science.1122438, 16627734
-
Olsen B, Munster VJ, Wallensten A, Waldenström J, Osterhaus ADME, Fouchier RAM. Global Patterns of influenza A Virus in Wild Birds. Science 2006, 312(5772):384-388. 10.1126/science.1122438, 16627734.
-
(2006)
Science
, vol.312
, Issue.5772
, pp. 384-388
-
-
Olsen, B.1
Munster, V.J.2
Wallensten, A.3
Waldenström, J.4
Osterhaus, A.D.M.E.5
Fouchier, R.A.M.6
-
6
-
-
24944468625
-
Whole-Genome Analysis of Human influenza A Virus Reveals Multiple Persistent Lineages and Reassortment among Recent H3N2 Viruses
-
10.1371/journal.pbio.0030300, 1180517, 16026181
-
Holmes EC, Ghedin E, Miller N, Taylor J, Bao Y, George KS, Grenfell BT, Salzberg SL, Fraser CM, Lipman DJ, Taubenberger JK. Whole-Genome Analysis of Human influenza A Virus Reveals Multiple Persistent Lineages and Reassortment among Recent H3N2 Viruses. PLoS Biol 2005, 3(9):e300. 10.1371/journal.pbio.0030300, 1180517, 16026181.
-
(2005)
PLoS Biol
, vol.3
, Issue.9
-
-
Holmes, E.C.1
Ghedin, E.2
Miller, N.3
Taylor, J.4
Bao, Y.5
George, K.S.6
Grenfell, B.T.7
Salzberg, S.L.8
Fraser, C.M.9
Lipman, D.J.10
Taubenberger, J.K.11
-
7
-
-
44949193800
-
The evolutionary genetics and emergence of avian influenza viruses in wild birds
-
10.1371/journal.ppat.1000076, 2387073, 18516303
-
Dugan VG, Chen R, Spiro DJ, Sengamalay N, Zaborsky J, Ghedin E, Nolting J, Swayne DE, Runstadler JA, Happ GM, Senne DA, Wang R, Slemons RD, Holmes EC, Taubenberger JK. The evolutionary genetics and emergence of avian influenza viruses in wild birds. PLoS Pathog 2008, 4(5):e1000076. 10.1371/journal.ppat.1000076, 2387073, 18516303.
-
(2008)
PLoS Pathog
, vol.4
, Issue.5
-
-
Dugan, V.G.1
Chen, R.2
Spiro, D.J.3
Sengamalay, N.4
Zaborsky, J.5
Ghedin, E.6
Nolting, J.7
Swayne, D.E.8
Runstadler, J.A.9
Happ, G.M.10
Senne, D.A.11
Wang, R.12
Slemons, R.D.13
Holmes, E.C.14
Taubenberger, J.K.15
-
8
-
-
0031203954
-
The dynamics of cocirculating influenza strains conferring partial cross-immunity
-
10.1007/s002850050079, 9269738
-
Andreasen V, Lin J, Levin SA. The dynamics of cocirculating influenza strains conferring partial cross-immunity. J Math Biol 1997, 35(7):825-842. 10.1007/s002850050079, 9269738.
-
(1997)
J Math Biol
, vol.35
, Issue.7
, pp. 825-842
-
-
Andreasen, V.1
Lin, J.2
Levin, S.A.3
-
9
-
-
23844436610
-
Strategies for containing an emerging influenza pandemic in Southeast Asia
-
10.1038/nature04017, 16079797
-
Ferguson NM, Cummings DAT, Cauchemez S, Fraser C, Riley S, Meeyai A, iamsirithaworn S, Burke DS. Strategies for containing an emerging influenza pandemic in Southeast Asia. Nature 2005, 437(7056):209-214. 10.1038/nature04017, 16079797.
-
(2005)
Nature
, vol.437
, Issue.7056
, pp. 209-214
-
-
Ferguson, N.M.1
Cummings, D.A.T.2
Cauchemez, S.3
Fraser, C.4
Riley, S.5
Meeyai, A.6
iamsirithaworn, S.7
Burke, D.S.8
-
10
-
-
66749140572
-
Improving the realism of deterministic multi-strain models: implications for modelling influenza A
-
2586098, 18801714
-
Minayev P, Ferguson N. Improving the realism of deterministic multi-strain models: implications for modelling influenza A. J R Soc Interface 2009, 6(35):509-518. 2586098, 18801714.
-
(2009)
J R Soc Interface
, vol.6
, Issue.35
, pp. 509-518
-
-
Minayev, P.1
Ferguson, N.2
-
11
-
-
0000998185
-
A contribution to the mathematical theory of epidemics
-
Kermak W, McKendrik A. A contribution to the mathematical theory of epidemics. Proc Roy Soc Lond 1927, 115:700-726.
-
(1927)
Proc Roy Soc Lond
, vol.115
, pp. 700-726
-
-
Kermak, W.1
McKendrik, A.2
-
14
-
-
0037168563
-
Dynamics and selection of many-strain pathogens
-
10.1073/pnas.252512799, 139294, 12481034
-
Gog JR, Grenfell BT. Dynamics and selection of many-strain pathogens. Proc Natl Acad Sci USA 2002, 99(26):17209-17214. 10.1073/pnas.252512799, 139294, 12481034.
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, Issue.26
, pp. 17209-17214
-
-
Gog, J.R.1
Grenfell, B.T.2
-
15
-
-
34247235763
-
The evolutionary emergence of pandemic influenza
-
1639509, 17015361
-
Day T, André JB, Park A. The evolutionary emergence of pandemic influenza. Proc Biol Sci 2006, 1639509, 17015361.
-
(2006)
Proc Biol Sci
-
-
Day, T.1
André, J.B.2
Park, A.3
-
16
-
-
0037076425
-
Agent-based modeling: methods and techniques for simulating human systems
-
10.1073/pnas.082080899, 128598, 12011407
-
Bonabeau E. Agent-based modeling: methods and techniques for simulating human systems. Proc Natl Acad Sci USA 2002, 99(Suppl 3):7280-7287. 10.1073/pnas.082080899, 128598, 12011407.
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, Issue.SUPPL. 3
, pp. 7280-7287
-
-
Bonabeau, E.1
-
18
-
-
0033557660
-
Ten years of indivdal-based modelling in ecology: what have we learned and what we could learn in the future?
-
Grimm V. Ten years of indivdal-based modelling in ecology: what have we learned and what we could learn in the future?. Ecol Mod 1999, 115:129-148.
-
(1999)
Ecol Mod
, vol.115
, pp. 129-148
-
-
Grimm, V.1
-
19
-
-
6344281115
-
Identifying control mechanisms of granuloma formation during M. tuberculosis infection using an agent-based model
-
10.1016/j.jtbi.2004.06.031, 15501468
-
Segovia-Juarez J, Ganguli S, Kirschner D. Identifying control mechanisms of granuloma formation during M. tuberculosis infection using an agent-based model. J Theor Biol 2004, 231(3):357-76. 10.1016/j.jtbi.2004.06.031, 15501468.
-
(2004)
J Theor Biol
, vol.231
, Issue.3
, pp. 357-376
-
-
Segovia-Juarez, J.1
Ganguli, S.2
Kirschner, D.3
-
20
-
-
0742266787
-
An agent-based model of sleeping sickness: simulation trials of a forest focus in southern Cameroon
-
10.1016/j.crvi.2003.12.002, 15015750
-
Muller G, Grébaut P, Gouteux J. An agent-based model of sleeping sickness: simulation trials of a forest focus in southern Cameroon. C R Biol 2004, 327:1-11. 10.1016/j.crvi.2003.12.002, 15015750.
-
(2004)
C R Biol
, vol.327
, pp. 1-11
-
-
Muller, G.1
Grébaut, P.2
Gouteux, J.3
-
21
-
-
27744570841
-
Pattern-oriented modeling of agent-based complex systems: lessons from ecology
-
10.1126/science.1116681, 16284171
-
Grimm V, Revilla E, Berger U, Jeltsch F, Mooij WM, Railsback SF, Thulke HH, Weiner J, Wiegand T, Deangelis DL. Pattern-oriented modeling of agent-based complex systems: lessons from ecology. Science 2005, 310(5750):987-991. 10.1126/science.1116681, 16284171.
-
(2005)
Science
, vol.310
, Issue.5750
, pp. 987-991
-
-
Grimm, V.1
Revilla, E.2
Berger, U.3
Jeltsch, F.4
Mooij, W.M.5
Railsback, S.F.6
Thulke, H.H.7
Weiner, J.8
Wiegand, T.9
Deangelis, D.L.10
-
23
-
-
84888283199
-
Multi agent systems and vector-borne disease epidemiology. Tinain model: First step toward real integration
-
Roche B, Guégan J, Bousquet F. Multi agent systems and vector-borne disease epidemiology. Tinain model: First step toward real integration. BMC BioInformatics 2009, 9:435.
-
(2009)
BMC BioInformatics
, vol.9
, pp. 435
-
-
Roche, B.1
Guégan, J.2
Bousquet, F.3
-
24
-
-
0035358852
-
How should pathogen transmission be modelled?
-
10.1016/S0169-5347(01)02144-9, 11369107
-
McCallum H, Barlow N, Hone J. How should pathogen transmission be modelled?. Trends in Ecology and Evolution 2001, 16(6):295-300. 10.1016/S0169-5347(01)02144-9, 11369107.
-
(2001)
Trends in Ecology and Evolution
, vol.16
, Issue.6
, pp. 295-300
-
-
McCallum, H.1
Barlow, N.2
Hone, J.3
-
25
-
-
67649840157
-
Environmental Transmission of Avian influenza Viruses and its Implications for Disease Control
-
Rohani P, Breban R, Stallknecht DE, Drake JM. Environmental Transmission of Avian influenza Viruses and its Implications for Disease Control. P Natl Acad Sci USA 2009, 106(25):10365-10369.
-
(2009)
P Natl Acad Sci USA
, vol.106
, Issue.25
, pp. 10365-10369
-
-
Rohani, P.1
Breban, R.2
Stallknecht, D.E.3
Drake, J.M.4
-
26
-
-
0020026897
-
Possible waterborne transmission and maintenance of influenza viruses in domestic ducks
-
241789, 7055370
-
Markwell DD, Shortridge KF. Possible waterborne transmission and maintenance of influenza viruses in domestic ducks. Appl Environ Microbiol 1982, 43:110-115. 241789, 7055370.
-
(1982)
Appl Environ Microbiol
, vol.43
, pp. 110-115
-
-
Markwell, D.D.1
Shortridge, K.F.2
-
27
-
-
0027622950
-
Biological and molecular characterization of H13N2 influenza type A viruses isolated from turkeys and surface water
-
10.2307/1592031, 8257373
-
Laudert E, Sivanandan V, Halvorson D, Shaw D, Webster RG. Biological and molecular characterization of H13N2 influenza type A viruses isolated from turkeys and surface water. Avian Dis 1993, 37(3):793-799. 10.2307/1592031, 8257373.
-
(1993)
Avian Dis
, vol.37
, Issue.3
, pp. 793-799
-
-
Laudert, E.1
Sivanandan, V.2
Halvorson, D.3
Shaw, D.4
Webster, R.G.5
-
28
-
-
0026231499
-
Isolation of H13N2 influenza A virus from turkeys and surface water
-
10.2307/1591638, 1838479
-
Sivanandan V, Halvorson DA, Laudert E, Senne DA, Kumar MC. Isolation of H13N2 influenza A virus from turkeys and surface water. Avian Dis 1991, 35(4):974-977. 10.2307/1591638, 1838479.
-
(1991)
Avian Dis
, vol.35
, Issue.4
, pp. 974-977
-
-
Sivanandan, V.1
Halvorson, D.A.2
Laudert, E.3
Senne, D.A.4
Kumar, M.C.5
-
29
-
-
67749088027
-
Water-borne transmission drives avian influenza dynamics in wild birds: the case of the 2005-2006 epidemics in the Camargue area
-
10.1016/j.meegid.2009.04.009, 19379841
-
Roche B, Lebarbenchon C, Gauthier-Clerc M, Chang CM, Thomas F, Renaud F, van der Werf S, Guegan JF. Water-borne transmission drives avian influenza dynamics in wild birds: the case of the 2005-2006 epidemics in the Camargue area. Infect Genet Evol 2009, 9:800-805. 10.1016/j.meegid.2009.04.009, 19379841.
-
(2009)
Infect Genet Evol
, vol.9
, pp. 800-805
-
-
Roche, B.1
Lebarbenchon, C.2
Gauthier-Clerc, M.3
Chang, C.M.4
Thomas, F.5
Renaud, F.6
van der Werf, S.7
Guegan, J.F.8
-
30
-
-
62749163023
-
Avian influenza virus in water: infectivity is dependent on pH, salinity and temperature
-
10.1016/j.vetmic.2008.10.027, 19081209
-
Brown JD, Goekjian G, Poulson R, Valeika S, Stallknecht DE. Avian influenza virus in water: infectivity is dependent on pH, salinity and temperature. Vet Microbiol 2009, 136(1-2):20-26. 10.1016/j.vetmic.2008.10.027, 19081209.
-
(2009)
Vet Microbiol
, vol.136
, Issue.1-2
, pp. 20-26
-
-
Brown, J.D.1
Goekjian, G.2
Poulson, R.3
Valeika, S.4
Stallknecht, D.E.5
-
31
-
-
77953620051
-
Environmental transmission scrambles coexistence patterns for avian influenza
-
10.1016/j.epidem.2010.03.002, 21352779
-
Roche B, Rohani P. Environmental transmission scrambles coexistence patterns for avian influenza. Epidemics 2010, 2(2):92-98. 10.1016/j.epidem.2010.03.002, 21352779.
-
(2010)
Epidemics
, vol.2
, Issue.2
, pp. 92-98
-
-
Roche, B.1
Rohani, P.2
-
32
-
-
66249141334
-
The role of environmental tranmission in reccurent avian influenza dynamics
-
10.1371/journal.pcbi.1000346, 2660440, 19360126
-
Breban R, Drake JM, Stallknecht DE, Rohani P. The role of environmental tranmission in reccurent avian influenza dynamics. PLoS Comput Biol 2009, 5:e1000346. 10.1371/journal.pcbi.1000346, 2660440, 19360126.
-
(2009)
PLoS Comput Biol
, vol.5
-
-
Breban, R.1
Drake, J.M.2
Stallknecht, D.E.3
Rohani, P.4
-
33
-
-
77952672950
-
A general multi-strain model with environmental transmission: Invasion conditions for the disease-free and endemic states
-
Breban R, Drake JM, Rohani P. A general multi-strain model with environmental transmission: Invasion conditions for the disease-free and endemic states. JTB 2010, 264:729-736.
-
(2010)
JTB
, vol.264
, pp. 729-736
-
-
Breban, R.1
Drake, J.M.2
Rohani, P.3
-
34
-
-
84874758788
-
-
Princeton University Press 2008 chap. Understanding Host-Multi-Pathogen Systens: The Interaction Between Ecology and Immunology
-
Rohani P, Wearing H, Huang Y. Infectious Disease Ecology Princeton University Press 2008 chap. Understanding Host-Multi-Pathogen Systens: The Interaction Between Ecology and Immunology.
-
Infectious Disease Ecology
-
-
Rohani, P.1
Wearing, H.2
Huang, Y.3
-
35
-
-
70350599175
-
Quantifying the impact of immune escape on transmission dynamics of influenza
-
10.1126/science.1175980, 19900931
-
Park AW, Daly JM, Lewis NS, Smith DJ, Wood JLN, Grenfell BT. Quantifying the impact of immune escape on transmission dynamics of influenza. Science 2009, 326(5953):726-728. 10.1126/science.1175980, 19900931.
-
(2009)
Science
, vol.326
, Issue.5953
, pp. 726-728
-
-
Park, A.W.1
Daly, J.M.2
Lewis, N.S.3
Smith, D.J.4
Wood, J.L.N.5
Grenfell, B.T.6
-
36
-
-
33645429016
-
Exact stochastic simulation of coupled chemical reactions
-
Gillespie DT. Exact stochastic simulation of coupled chemical reactions. The Journal of Physical Chemistry 1977, 81:2340-2361.
-
(1977)
The Journal of Physical Chemistry
, vol.81
, pp. 2340-2361
-
-
Gillespie, D.T.1
-
37
-
-
0035933994
-
Approximate accelerated stochastic simulation of chemically reacting systems
-
Gillespie DT. Approximate accelerated stochastic simulation of chemically reacting systems. Journal of Chemical Physics 2001, 115:1716-1733.
-
(2001)
Journal of Chemical Physics
, vol.115
, pp. 1716-1733
-
-
Gillespie, D.T.1
-
40
-
-
0010237670
-
The ecology and evolution of spatial host-parasite systems
-
University of Warwick
-
Keeling MJ. The ecology and evolution of spatial host-parasite systems. PhD thesis 1995, University of Warwick.
-
(1995)
PhD thesis
-
-
Keeling, M.J.1
|