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Volumn 157, Issue 1, 2011, Pages 13-18

Identification of a novel Soybean mosaic virus isolate in China that contains a unique 5' terminus sharing high sequence homology with Bean common mosaic virus

Author keywords

5' terminus; Bean common mosaic virus; Recombination; Soybean mosaic virus

Indexed keywords

AMINO ACID; RNA;

EID: 79953030081     PISSN: 01681702     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.virusres.2011.01.011     Document Type: Article
Times cited : (27)

References (37)
  • 1
    • 27644565866 scopus 로고    scopus 로고
    • Overview and analysis of the polyprotein cleavage sites in the family Potyviridae
    • Adams M.J., Antoniw J.F., Beaudoin F. Overview and analysis of the polyprotein cleavage sites in the family Potyviridae. Mol. Plant Pathol. 2005, 6:471-487.
    • (2005) Mol. Plant Pathol. , vol.6 , pp. 471-487
    • Adams, M.J.1    Antoniw, J.F.2    Beaudoin, F.3
  • 2
    • 15244344343 scopus 로고    scopus 로고
    • Molecular criteria for genus and species discrimination within the family Potyviridae
    • Adams M.J., Antoniw J.F., Fauquet C.M. Molecular criteria for genus and species discrimination within the family Potyviridae. Arch. Virol. 2005, 150:459-479.
    • (2005) Arch. Virol. , vol.150 , pp. 459-479
    • Adams, M.J.1    Antoniw, J.F.2    Fauquet, C.M.3
  • 3
    • 33744726935 scopus 로고    scopus 로고
    • The complete nucleotide sequence of a Pakistani isolate of Watermelon mosaic virus provides further insights into the taxonomic status in the Bean common mosaic virus subgroup
    • Ali A., Natsuaki T., Okuda S. The complete nucleotide sequence of a Pakistani isolate of Watermelon mosaic virus provides further insights into the taxonomic status in the Bean common mosaic virus subgroup. Virus Genes 2006, 32:307-311.
    • (2006) Virus Genes , vol.32 , pp. 307-311
    • Ali, A.1    Natsuaki, T.2    Okuda, S.3
  • 4
    • 1042279136 scopus 로고    scopus 로고
    • A virus related to Soybean mosaic virus from Pinellia ternata in China and its comparison with local soybean SMV isolates
    • Chen J., Zheng H.Y., Lin L., Adams M.J., Antoniw J.F., Zhao M.F., Shang Y.F., Chen J.P. A virus related to Soybean mosaic virus from Pinellia ternata in China and its comparison with local soybean SMV isolates. Arch. Virol. 2004, 149:349-363.
    • (2004) Arch. Virol. , vol.149 , pp. 349-363
    • Chen, J.1    Zheng, H.Y.2    Lin, L.3    Adams, M.J.4    Antoniw, J.F.5    Zhao, M.F.6    Shang, Y.F.7    Chen, J.P.8
  • 5
    • 22044440442 scopus 로고    scopus 로고
    • Emergence of Rsv-resistance breaking Soybean mosaic virus isolates from Korean soybean cultivars
    • Choi B.K., Koo J.M., Ahn H.J., Yum H.J., Choi C.W., Ryu K.H., Chen P., Tolin S.A. Emergence of Rsv-resistance breaking Soybean mosaic virus isolates from Korean soybean cultivars. Virus Res. 2005, 112:42-51.
    • (2005) Virus Res. , vol.112 , pp. 42-51
    • Choi, B.K.1    Koo, J.M.2    Ahn, H.J.3    Yum, H.J.4    Choi, C.W.5    Ryu, K.H.6    Chen, P.7    Tolin, S.A.8
  • 6
    • 78650639375 scopus 로고    scopus 로고
    • Mutations in the P3 protein of Soybean mosaic virus G2 isolates determine virulence on Rsv4-genotype soybean
    • Chowda-Reddy R.V., Sun H., Chen H., Poysa V., Ling H., Gijzen M., Wang A. Mutations in the P3 protein of Soybean mosaic virus G2 isolates determine virulence on Rsv4-genotype soybean. Mol. Plant-Microbe Interact. 2011, 24:37-43.
    • (2011) Mol. Plant-Microbe Interact. , vol.24 , pp. 37-43
    • Chowda-Reddy, R.V.1    Sun, H.2    Chen, H.3    Poysa, V.4    Ling, H.5    Gijzen, M.6    Wang, A.7
  • 8
    • 0017365816 scopus 로고
    • Characteristics of the microplate method of enzyme linked immunosorbent assay for the detection of the plant viruses
    • Clark M.F., Adams A.N. Characteristics of the microplate method of enzyme linked immunosorbent assay for the detection of the plant viruses. J. Gen. Virol. 1977, 34:475-483.
    • (1977) J. Gen. Virol. , vol.34 , pp. 475-483
    • Clark, M.F.1    Adams, A.N.2
  • 9
    • 4043122495 scopus 로고    scopus 로고
    • The nucleotide sequence of Watermelon mosaic virus (WMV, Potyvirus) reveals interspecific recombination between two related potyviruses in the 5' part of the genome
    • Desbiez C., Lecoq H. The nucleotide sequence of Watermelon mosaic virus (WMV, Potyvirus) reveals interspecific recombination between two related potyviruses in the 5' part of the genome. Arch. Virol. 2004, 149:1619-1632.
    • (2004) Arch. Virol. , vol.149 , pp. 1619-1632
    • Desbiez, C.1    Lecoq, H.2
  • 10
    • 0000122573 scopus 로고
    • PHYLIP-Phylogeny Inference Package (Version 3.2)
    • Felsenstein J. PHYLIP-Phylogeny Inference Package (Version 3.2). Cladistics 1989, 5:164-166.
    • (1989) Cladistics , vol.5 , pp. 164-166
    • Felsenstein, J.1
  • 11
    • 55749109180 scopus 로고    scopus 로고
    • Identification and molecular characterization of two naturally occurring Soybean mosaic virus isolates that are closely related but differ in their ability to overcome Rsv4 resistance
    • Gagarinova A.G., Babu M., Poysa V., Hill J.H., Wang A. Identification and molecular characterization of two naturally occurring Soybean mosaic virus isolates that are closely related but differ in their ability to overcome Rsv4 resistance. Virus Res. 2008, 138:50-56.
    • (2008) Virus Res. , vol.138 , pp. 50-56
    • Gagarinova, A.G.1    Babu, M.2    Poysa, V.3    Hill, J.H.4    Wang, A.5
  • 12
    • 33845337285 scopus 로고    scopus 로고
    • Identification and distribution of Soybean mosaic virus strains in Middle and Northern Huang Huai Region of China
    • Guo D.Q., Zhi H.J., Wang Y.W., Gai J.Y., Zhou X.A., Yang C.L., Li K., Li H.C. Identification and distribution of Soybean mosaic virus strains in Middle and Northern Huang Huai Region of China. Chin. J. Oil Crop Sci. 2005, 27:64-68.
    • (2005) Chin. J. Oil Crop Sci. , vol.27 , pp. 64-68
    • Guo, D.Q.1    Zhi, H.J.2    Wang, Y.W.3    Gai, J.Y.4    Zhou, X.A.5    Yang, C.L.6    Li, K.7    Li, H.C.8
  • 13
    • 0002051540 scopus 로고    scopus 로고
    • BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT
    • Hall T.A. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp. Ser. 1999, 41:95-98.
    • (1999) Nucleic Acids Symp. Ser. , vol.41 , pp. 95-98
    • Hall, T.A.1
  • 14
    • 0013360506 scopus 로고    scopus 로고
    • Soybean mosaic
    • The American Phytopathological Society, St. Paul, MN, G.L. Hartman, J.B. Sinclair, J.C. Rupe (Eds.)
    • Hill J.H. Soybean mosaic. Compendium of Soybean Diseases 1999, 70-71. The American Phytopathological Society, St. Paul, MN. fourth ed. G.L. Hartman, J.B. Sinclair, J.C. Rupe (Eds.).
    • (1999) Compendium of Soybean Diseases , pp. 70-71
    • Hill, J.H.1
  • 15
    • 30744470609 scopus 로고    scopus 로고
    • Application of phylogenetic networks in evolutionary studies
    • Huson D.H., Bryant D. Application of phylogenetic networks in evolutionary studies. Mol. Biol. Evol. 2006, 23:254-267.
    • (2006) Mol. Biol. Evol. , vol.23 , pp. 254-267
    • Huson, D.H.1    Bryant, D.2
  • 16
    • 0032514856 scopus 로고    scopus 로고
    • A counter defensive strategy of plant viruses: suppression of posttranscriptional gene silencing
    • Kasschau K.D., Carrington J.C. A counter defensive strategy of plant viruses: suppression of posttranscriptional gene silencing. Cell 1998, 95:461-470.
    • (1998) Cell , vol.95 , pp. 461-470
    • Kasschau, K.D.1    Carrington, J.C.2
  • 17
    • 23944505183 scopus 로고    scopus 로고
    • NL-3 K strain is a stable and naturally occurring interspecific recombinant derived from Bean common mosaic necrosis virus and Bean common mosaic virus
    • Larsen R.C., Miklas P.N., Druffel K.L., Wyatt S.D. NL-3 K strain is a stable and naturally occurring interspecific recombinant derived from Bean common mosaic necrosis virus and Bean common mosaic virus. Phytopathology 2005, 95:1037-1042.
    • (2005) Phytopathology , vol.95 , pp. 1037-1042
    • Larsen, R.C.1    Miklas, P.N.2    Druffel, K.L.3    Wyatt, S.D.4
  • 18
    • 77749264187 scopus 로고    scopus 로고
    • Identification and distribution of Soybean mosaic virus strains in southern China
    • Li K., Yang Q.H., Zhi H.J., Gai J.Y. Identification and distribution of Soybean mosaic virus strains in southern China. Plant Dis. 2010, 94:351-357.
    • (2010) Plant Dis. , vol.94 , pp. 351-357
    • Li, K.1    Yang, Q.H.2    Zhi, H.J.3    Gai, J.Y.4
  • 21
    • 78149351875 scopus 로고    scopus 로고
    • Involvement of the P1 cistron in overcoming eIF4E-mediated recessive resistance against Clover yellow vein virus in pea
    • Nakahara K.S., Shimada R., Choi S.H., Yamamoto H., Shao J., Uyeda I. Involvement of the P1 cistron in overcoming eIF4E-mediated recessive resistance against Clover yellow vein virus in pea. Mol. Plant-Microbe Interact. 2010, 23:1460-1469.
    • (2010) Mol. Plant-Microbe Interact. , vol.23 , pp. 1460-1469
    • Nakahara, K.S.1    Shimada, R.2    Choi, S.H.3    Yamamoto, H.4    Shao, J.5    Uyeda, I.6
  • 22
    • 0030203863 scopus 로고    scopus 로고
    • Treeview: An application to display phylogenetic trees on personal computers
    • Page R.D.M. Treeview: An application to display phylogenetic trees on personal computers. Comput. Appl. Biosci. 1996, 12:357-358.
    • (1996) Comput. Appl. Biosci. , vol.12 , pp. 357-358
    • Page, R.D.M.1
  • 23
    • 0031153997 scopus 로고    scopus 로고
    • Plant viral synergism: the potyviral genome encodes a broad-range pathogenicity enhancer that transactivates replication of heterologous viruses
    • Pruss G., Ge X., Shi X.M., Carrington J.C., Vance V.B. Plant viral synergism: the potyviral genome encodes a broad-range pathogenicity enhancer that transactivates replication of heterologous viruses. Plant Cell 1997, 9:859-868.
    • (1997) Plant Cell , vol.9 , pp. 859-868
    • Pruss, G.1    Ge, X.2    Shi, X.M.3    Carrington, J.C.4    Vance, V.B.5
  • 24
    • 27444439635 scopus 로고    scopus 로고
    • A novel insertion site inside the potyvirus P1 cistron allows expression of heterologous proteins and suggests some P1 functions
    • Rajamaki M.L., Kelloniemi J., Alminaite A., Kekarainen T., Rabenstein F., Valkonen J.P. A novel insertion site inside the potyvirus P1 cistron allows expression of heterologous proteins and suggests some P1 functions. Virology 2005, 342:88-101.
    • (2005) Virology , vol.342 , pp. 88-101
    • Rajamaki, M.L.1    Kelloniemi, J.2    Alminaite, A.3    Kekarainen, T.4    Rabenstein, F.5    Valkonen, J.P.6
  • 25
    • 79953025295 scopus 로고    scopus 로고
    • SimPlot for Windows (Version 3.5.1). Baltimore, MD, Distributed by author
    • Ray, S.C., 2003. SimPlot for Windows (Version 3.5.1). Baltimore, MD, Distributed by author. http://www.sray.med.som.jhmi.edu/SCRoftware.
    • (2003)
    • Ray, S.C.1
  • 26
    • 23944505183 scopus 로고    scopus 로고
    • Wyatt NL-3 K strain is a stable and naturally occurring interspecific recombinant derived from Bean common mosaic necrosis virus and Bean common mosaic virus
    • Richard C.L., Phillip N.M., Keri L.D., Stephen D. Wyatt NL-3 K strain is a stable and naturally occurring interspecific recombinant derived from Bean common mosaic necrosis virus and Bean common mosaic virus. Virology 2005, 95:1037-1042.
    • (2005) Virology , vol.95 , pp. 1037-1042
    • Richard, C.L.1    Phillip, N.M.2    Keri, L.D.3    Stephen, D.4
  • 27
    • 0343314920 scopus 로고    scopus 로고
    • Identification of a pathogenicity determinant of Plum pox virus in the sequence encoding the C-terminal region of protein P3+6K(1)
    • Saenz P., Cervera M.T., Dallot S., Quiot L., Quiot J.B., Riechmann J.L., Garcia J.A. Identification of a pathogenicity determinant of Plum pox virus in the sequence encoding the C-terminal region of protein P3+6K(1). J. Gen. Virol. 2000, 81:557-566.
    • (2000) J. Gen. Virol. , vol.81 , pp. 557-566
    • Saenz, P.1    Cervera, M.T.2    Dallot, S.3    Quiot, L.4    Quiot, J.B.5    Riechmann, J.L.6    Garcia, J.A.7
  • 28
    • 28444455611 scopus 로고    scopus 로고
    • Molecular characterization of A2 and D strains of Soybean mosaic virus, which caused a recent virus outbreak in soybean cultivar Sachiyutaka in Chugoku and Shikoku regions of Japan
    • Saruta M., Kikuchi A., Okabe A., Sasaya T. Molecular characterization of A2 and D strains of Soybean mosaic virus, which caused a recent virus outbreak in soybean cultivar Sachiyutaka in Chugoku and Shikoku regions of Japan. J. Gen. Plant Pathol. 2005, 71:431-435.
    • (2005) J. Gen. Plant Pathol. , vol.71 , pp. 431-435
    • Saruta, M.1    Kikuchi, A.2    Okabe, A.3    Sasaya, T.4
  • 29
    • 70349240225 scopus 로고    scopus 로고
    • Molecular variability and genetic structure of the population of Soybean mosaic virus based on the analysis of complete genome sequences
    • Seo J.K., Ohshima K., Lee H.G., Son M., Choi H.S., Lee S.H., Sohn S.H., Kim K.H. Molecular variability and genetic structure of the population of Soybean mosaic virus based on the analysis of complete genome sequences. Virology 2009, 393:91-103.
    • (2009) Virology , vol.393 , pp. 91-103
    • Seo, J.K.1    Ohshima, K.2    Lee, H.G.3    Son, M.4    Choi, H.S.5    Lee, S.H.6    Sohn, S.H.7    Kim, K.H.8
  • 31
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: Molecular evolutionary genetics analysis (MEGA) software version 4.0
    • Tamura K., Dudley J., Nei M., Kumar S. MEGA4: Molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol. Biol. Evol. 2007, 24:1596-1599.
    • (2007) Mol. Biol. Evol. , vol.24 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 32
    • 0031574072 scopus 로고    scopus 로고
    • The ClustalX windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson J.D., Gibson T.J., Plewniak F., Jeanmougin F., Higgins D.G. The ClustalX windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 1997, 25:4876-4882.
    • (1997) Nucleic Acids Res. , vol.25 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 33
    • 33749488925 scopus 로고    scopus 로고
    • RNA silencing suppression by a second copy of the P1 serine protease of Cucumber vein yellowing ipomovirus (CVYV), a member of the family Potyviridae that lacks the cysteine protease HCPro
    • Valli A., Martin-Hernandez A.M., Lopez-Moya J.J., Garcia J.A. RNA silencing suppression by a second copy of the P1 serine protease of Cucumber vein yellowing ipomovirus (CVYV), a member of the family Potyviridae that lacks the cysteine protease HCPro. J. Virol. 2006, 80:10055-10063.
    • (2006) J. Virol. , vol.80 , pp. 10055-10063
    • Valli, A.1    Martin-Hernandez, A.M.2    Lopez-Moya, J.J.3    Garcia, J.A.4
  • 34
    • 77749238472 scopus 로고    scopus 로고
    • Classification and distribution of strains of Soybean mosaic virus in northern China spring planting soybean region
    • Wang Y.W., Zhi H.J., Guo D.Q., Gai J.Y., Chen Q.S., Li K., Li H.C. Classification and distribution of strains of Soybean mosaic virus in northern China spring planting soybean region. Soybean Sci. 2005, 24:263-268.
    • (2005) Soybean Sci. , vol.24 , pp. 263-268
    • Wang, Y.W.1    Zhi, H.J.2    Guo, D.Q.3    Gai, J.Y.4    Chen, Q.S.5    Li, K.6    Li, H.C.7
  • 35
    • 77954687469 scopus 로고    scopus 로고
    • Formation of complexes at plasmodesmata for potyvirus intercellular movement is mediated by the viral Protein P3N-PIPO
    • Wei T., Zhang C., Hong J., Xiong R., Kasschau K.D., Zhou X., Carrington J.C., Wang A. Formation of complexes at plasmodesmata for potyvirus intercellular movement is mediated by the viral Protein P3N-PIPO. PLoS Pathogens 2010, 6(6):e1000962.
    • (2010) PLoS Pathogens , vol.6 , Issue.6
    • Wei, T.1    Zhang, C.2    Hong, J.3    Xiong, R.4    Kasschau, K.D.5    Zhou, X.6    Carrington, J.C.7    Wang, A.8
  • 36
    • 79953027089 scopus 로고    scopus 로고
    • Classification and distribution of strains of Soybean mosaic virus in the middle and lower Changjiang River Valleys and the resistance to Soybean mosaic virus in soybeans. Master's Thesis, Nanjing Agricultural University, Nanjing, China (in Chinese)
    • Yang, Y.L., 2002. Classification and distribution of strains of Soybean mosaic virus in the middle and lower Changjiang River Valleys and the resistance to Soybean mosaic virus in soybeans. Master's Thesis, Nanjing Agricultural University, Nanjing, China (in Chinese).
    • (2002)
    • Yang, Y.L.1
  • 37
    • 77649288826 scopus 로고    scopus 로고
    • Identification and distribution of SMV strains in Huang-Huai Valleys
    • Zhan Y., Zhi H.J., Yu D.Y., Gai J.Y. Identification and distribution of SMV strains in Huang-Huai Valleys. Sci. Agric. Sin. 2006, 39:2009-2015.
    • (2006) Sci. Agric. Sin. , vol.39 , pp. 2009-2015
    • Zhan, Y.1    Zhi, H.J.2    Yu, D.Y.3    Gai, J.Y.4


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