-
1
-
-
0032853219
-
Cellular and molecular biology of the aquaporin water channels
-
DOI 10.1146/annurev.biochem.68.1.425
-
Borgnia M., Nielsen S., Engel A., and Agre P. Cellular and molecular biology of the aquaporin water channels Annu. Rev. Biochem. 68 1999 425 458 (Pubitemid 29449199)
-
(1999)
Annual Review of Biochemistry
, vol.68
, pp. 425-458
-
-
Borgnia, M.1
Nielsen, So.2
Engel, A.3
Agre, P.4
-
2
-
-
4444221676
-
From structure to disease: The evolving tale of aquaporin biology
-
DOI 10.1038/nrm1469
-
King L.S., Kozono D., and Agre P. From structure to disease: the evolving tale of aquaporin biology Nat. Rev. Mol. Cell Biol. 5 2004 687 698 (Pubitemid 39208179)
-
(2004)
Nature Reviews Molecular Cell Biology
, vol.5
, Issue.9
, pp. 687-698
-
-
King, L.S.1
Kozono, D.2
Agre, P.3
-
3
-
-
24344497831
-
More than just water channels: Unexpected cellular roles of aquaporins
-
DOI 10.1242/jcs.02519
-
Verkman A.S. More than just water channels: unexpected cellular roles of aquaporins J. Cell Sci 118 2005 3225 3232 (Pubitemid 41246081)
-
(2005)
Journal of Cell Science
, vol.118
, Issue.15
, pp. 3225-3232
-
-
Verkman, A.S.1
-
5
-
-
10944255127
-
Molecular mechanisms and drug development in aquaporin water channel diseases: Aquaporin superfamily (superaquaporins): Expansion of aquaporins restricted to multicellular organisms
-
DOI 10.1254/jphs.FMJ04004X7
-
Morishita Y., Sakube Y., Sasaki S., and Ishibashi K. Molecular mechanisms and drug development in aquaporin water channel diseases: aquaporin superfamily (superaquaporins): expansion of aquaporins restricted to multicellular organisms J. Pharm. Sci. 96 2004 276 279 (Pubitemid 40013335)
-
(2004)
Journal of Pharmacological Sciences
, vol.96
, Issue.3
, pp. 276-279
-
-
Morishita, Y.1
Sakube, Y.2
Sasaki, S.3
Ishibashi, K.4
-
6
-
-
25644456056
-
+ permeability in aquaporin-expressing Xenopus oocytes
-
DOI 10.1007/s00424-005-1399-1
-
+ permeability in aquaporin-expressing Xenopus oocytes Pfluegers Arch. 450 2005 415 428 (Pubitemid 41380700)
-
(2005)
Pflugers Archiv European Journal of Physiology
, vol.450
, Issue.6
, pp. 415-428
-
-
Holm, L.M.1
Jahn, T.P.2
Moller, A.L.B.3
Schjoerring, J.K.4
Ferri, D.5
Klaerke, D.A.6
Zeuthen, T.7
-
7
-
-
0242573122
-
Aquaporin water channels: Molecular mechanisms for human diseases
-
DOI 10.1016/S0014-5793(03)01083-4
-
Agre P., and Kozono D. Aquaporin water channels: molecular mechanisms for human diseases FEBS Lett. 555 2003 72 78 (Pubitemid 37431100)
-
(2003)
FEBS Letters
, vol.555
, Issue.1
, pp. 72-78
-
-
Agre, P.1
Kozono, D.2
-
8
-
-
17044366269
-
Aquaporins as targets for drug discovery
-
Castle N.A. Aquaporins as targets for drug discovery Drug Discov. Today 10 2005 485 493
-
(2005)
Drug Discov. Today
, vol.10
, pp. 485-493
-
-
Castle, N.A.1
-
9
-
-
0030717558
-
Aquaporin-1 water channel expression in human kidney
-
Maunsbach A.B., Marples D., Chin E., Ning G., Bondy C., Agre P., and Nielsen S. Aquaporin-1 water channel expression in human kidney J. Am. Soc. Nephrol. 8 1997 1 14 (Pubitemid 27496510)
-
(1997)
Journal of the American Society of Nephrology
, vol.8
, Issue.1
, pp. 1-14
-
-
Maunsbach, A.B.1
Marples, D.2
Chin, E.3
Ning, G.4
Bondy, C.5
Agre, P.6
Nielsen, S.7
-
10
-
-
0344055360
-
Aquaporin-1 (AQP1) expression in normal and uremic human peritoneal tissues
-
Devuyst O., Nielsen S., Cosyns J.P., Smith B.L., Agre P., and Goffin E. Aquaporin-1 (AQP1) expression in normal and uremic human peritoneal tissues J. Am. Soc. Nephrol. 8 1997 A0834-A0834
-
(1997)
J. Am. Soc. Nephrol.
, vol.8
-
-
Devuyst, O.1
Nielsen, S.2
Cosyns, J.P.3
Smith, B.L.4
Agre, P.5
Goffin, E.6
-
11
-
-
31044449089
-
Point mutations in the aromatic/arginine region in aquaporin 1 allow passage of urea, glycerol, ammonia, and protons
-
DOI 10.1073/pnas.0507225103
-
Beitz E., Wu B.H., Holm L.M., Schultz J.E., and Zeuthen T. Point mutations in the aromatic/arginine region in aquaporin 1 allow passage of urea, glycerol, ammonia, and protons Proc. Natl Acad. Sci. USA 103 2006 269 274 (Pubitemid 43122390)
-
(2006)
Proceedings of the National Academy of Sciences of the United States of America
, vol.103
, Issue.2
, pp. 269-274
-
-
Beitz, E.1
Wu, B.2
Holm, L.M.3
Schultz, J.E.4
Zeuthen, T.5
-
12
-
-
33748490735
-
Ammonia permeability of the aquaglyceroporins from Plasmodium falciparum, Toxoplasma gondii and Trypansoma brucei
-
DOI 10.1111/j.1365-2958.2006.05325.x
-
Zeuthen T., Wu B.H., Pavlovic-Djuranovic S., Holm L.M., Uzcategui N.L., and Duszenko M. Ammonia permeability of the aquaglyceroporins from Plasmodium falciparum, Toxoplasma gondii and Trypansoma brucei Mol. Microbiol. 61 2006 1598 1608 (Pubitemid 44359386)
-
(2006)
Molecular Microbiology
, vol.61
, Issue.6
, pp. 1598-1608
-
-
Zeuthen, T.1
Wu, B.2
Pavlovic-Djuranovic, S.3
Holm, L.M.4
Uzcategui, N.L.5
Duszenko, M.6
Kun, J.F.J.7
Schultz, J.E.8
Beitz, E.9
-
13
-
-
40449129441
-
Differential localization and regulation of two aquaporin-1 homologs in the intestinal epithelia of the marine teleost Sparus aurata
-
Raldua D., Otero D., Fabra M., and Cerda J. Differential localization and regulation of two aquaporin-1 homologs in the intestinal epithelia of the marine teleost Sparus aurata Am. J. Physol.: Regul., Integr. Comp. Physiol. 294 2008 R993 R1003
-
(2008)
Am. J. Physol.: Regul., Integr. Comp. Physiol.
, vol.294
-
-
Raldua, D.1
Otero, D.2
Fabra, M.3
Cerda, J.4
-
14
-
-
43049130685
-
Expression of aquaporin-1 in normal, hyperplasic, and carcinomatous endometria
-
Pan H., Sun C.C., Zhou C.Y., and Huang H.F. Expression of aquaporin-1 in normal, hyperplasic, and carcinomatous endometria Int. J. Gynecol. Obstet. 101 2008 239 244
-
(2008)
Int. J. Gynecol. Obstet.
, vol.101
, pp. 239-244
-
-
Pan, H.1
Sun, C.C.2
Zhou, C.Y.3
Huang, H.F.4
-
16
-
-
39649119907
-
AQP1 expression analysis in human diseases: Implications for proteomic characterization
-
DOI 10.1586/14789450.5.1.29
-
Magni F., Chinello C., Raimondo F., Mocarelli P., Kienle M.G., and Pitto M. AQP1 expression analysis in human diseases: implications for proteomic characterization Expert Rev. Proteomics 5 2008 29 43 (Pubitemid 351287740)
-
(2008)
Expert Review of Proteomics
, vol.5
, Issue.1
, pp. 29-43
-
-
Magni, F.1
Chinello, C.2
Raimondo, F.3
Mocarelli, P.4
Kienle, M.G.5
Pitto, M.6
-
17
-
-
66149097844
-
Crystal structure of human aquaporin 4 at 1.8 Å and its mechanism of conductance
-
Ho J.D., Yeh R., Sandstrom A., Chorny I., Harries W.E.C., and Robbins R.A. Crystal structure of human aquaporin 4 at 1.8 Å and its mechanism of conductance Proc. Natl Acad. Sci. USA 106 2009 7437 7442
-
(2009)
Proc. Natl Acad. Sci. USA
, vol.106
, pp. 7437-7442
-
-
Ho, J.D.1
Yeh, R.2
Sandstrom, A.3
Chorny, I.4
Harries, W.E.C.5
Robbins, R.A.6
-
18
-
-
0037134267
-
Control of the selectivity of the aquaporin water channel family by global orientational tuning
-
DOI 10.1126/science.1067778
-
Tajkhorshid E., Nollert P., Jensen M.∅., Miercke L.J.W., O'Connell J., Stroud R.M., and Schulten K. Control of the selectivity of the aquaporin water channel family by global orientational tuning Science 296 2002 525 530 (Pubitemid 34413590)
-
(2002)
Science
, vol.296
, Issue.5567
, pp. 525-530
-
-
Tajkhorshid, E.1
Nollert, P.2
Jensen, M.O.3
Miercke, L.J.W.4
O'Connell, J.5
Stroud, R.M.6
Schulten, K.7
-
19
-
-
0035861454
-
Water permeation across biological membranes: Mechanism and dynamics of aquaporin-1 and GlpF
-
DOI 10.1126/science.1062459
-
de Groot B.L., and Grubmüller H. Water permeation across biological membranes: mechanism and dynamics of aquaporin-1 and GlpF Science 294 2001 2353 2357 (Pubitemid 33140559)
-
(2001)
Science
, vol.294
, Issue.5550
, pp. 2353-2357
-
-
De Groot, B.L.1
Grubmuller, H.2
-
20
-
-
0141534474
-
The mechanism of proton exclusion in the aquaporin-1 water channel
-
DOI 10.1016/j.jmb.2003.08.003
-
de Groot B.L., Frigato T., Helms V., and Grubmüller H. The mechanism of proton exclusion in the aquaporin-1 water channel J. Mol. Biol. 333 2003 279 293 (Pubitemid 37188572)
-
(2003)
Journal of Molecular Biology
, vol.333
, Issue.2
, pp. 279-293
-
-
De Groot, B.L.1
Frigato, T.2
Helms, V.3
Grubmuller, H.4
-
21
-
-
0242269040
-
Electrostatic Tuning of Permeation and Selectivity in Aquaporin Water Channels
-
Jensen M.∅., Tajkhorshid E., and Schulten K. Electrostatic tuning of permeation and selectivity in squaporin water channels Biophys. J. 85 2003 2884 2899 (Pubitemid 37351012)
-
(2003)
Biophysical Journal
, vol.85
, Issue.5
, pp. 2884-2899
-
-
Jensen, M.O.1
Tajkhorshid, E.2
Schulten, K.3
-
22
-
-
1842583051
-
The Mechanism of Proton Exclusion in Aquaporin Channels
-
DOI 10.1002/prot.20038
-
Ilan B., Tajkhorshid E., Schulten K., and Voth G.A. The mechanism of proton exclusion in aquaporin channels Proteins: Struct., Funct., Bioinformatics 55 2004 223 228 (Pubitemid 38443361)
-
(2004)
Proteins: Structure, Function and Genetics
, vol.55
, Issue.2
, pp. 223-228
-
-
Ilan, B.1
Tajkhorshid, E.2
Schulten, K.3
Voth, G.A.4
-
23
-
-
10044297778
-
Details of water and ion permeation in AQP1 and GlpF water channels studied by Monte Carlo simulations
-
Miloshevsky G.V., and Jordan P.C. Details of water and ion permeation in AQP1 and GlpF water channels studied by Monte Carlo simulations Biophys. J. 86 2004 466a
-
(2004)
Biophys. J.
, vol.86
-
-
Miloshevsky, G.V.1
Jordan, P.C.2
-
25
-
-
0344825877
-
What Really Prevents Proton Transport through Aquaporin? Charge Self-Energy versus Proton Wire Proposals
-
Burykin A., and Warshel A. What really prevents proton transport through aquaporin? Charge self-energy versus proton wire proposals Biophys. J. 85 2003 3696 3706 (Pubitemid 37492952)
-
(2003)
Biophysical Journal
, vol.85
, Issue.6
, pp. 3696-3706
-
-
Burykin, A.1
Warshel, A.2
-
26
-
-
3142570534
-
On the origin of the electrostatic barrier for proton transport in aquaporin
-
DOI 10.1016/j.febslet.2004.06.020, PII S0014579304007410
-
Burykin A., and Warshel A. On the origin of the electrostatic barrier for proton transport in aquaporin FEBS Lett. 570 2004 41 46 (Pubitemid 38900953)
-
(2004)
FEBS Letters
, vol.570
, Issue.1-3
, pp. 41-46
-
-
Burykin, A.1
Warshel, A.2
-
27
-
-
17044406611
-
The dynamics and energetics of water permeation and proton exclusion in aquaporins
-
de Groot B.L., and Grubmüller H. The dynamics and energetics of water permeation and proton exclusion in aquaporins Curr. Opin. Struct. Biol. 15 2005 176 183
-
(2005)
Curr. Opin. Struct. Biol.
, vol.15
, pp. 176-183
-
-
De Groot, B.L.1
Grubmüller, H.2
-
28
-
-
24144476593
-
Hydroxide and proton migration in aquaporins
-
DOI 10.1529/biophysj.104.058206
-
Jensen M.∅., Röthlisberger U., and Rovira C. Hydroxide and proton migration in aquaporins Biophys. J. 89 2005 1744 1759 (Pubitemid 41235477)
-
(2005)
Biophysical Journal
, vol.89
, Issue.3
, pp. 1744-1759
-
-
Jensen, M.O.1
Rothlisberger, U.2
Rovira, C.3
-
29
-
-
33646170424
-
Origins of proton transport behavior from selectivity domain mutations of the aquaporin-1 channel
-
Chen H.N., Wu Y.J., and Voth G.A. Origins of proton transport behavior from selectivity domain mutations of the aquaporin-1 channel Biophys. J. 90 2006 L73 L75
-
(2006)
Biophys. J.
, vol.90
-
-
Chen, H.N.1
Wu, Y.J.2
Voth, G.A.3
-
30
-
-
33846021582
-
Charge delocalization in proton channels, I: The aquaporin channels and proton blockage
-
DOI 10.1529/biophysj.106.091934
-
Chen H.N., Ilan B., Wu Y.J., Zhu F.Q., Schulten K., and Voth G.A. Charge delocalization in proton channels, I: the aquaporin channels and proton blockage Biophys. J. 92 2007 46 60 (Pubitemid 46048415)
-
(2007)
Biophysical Journal
, vol.92
, Issue.1
, pp. 46-60
-
-
Chen, H.1
Ilan, B.2
Wu, Y.3
Zhu, F.4
Schulten, K.5
Voth, G.A.6
-
31
-
-
33748456949
-
The barrier for proton transport in aquaporins as a challenge for electrostatic models: The role of protein relaxation in mutational calculations
-
DOI 10.1002/prot.21012
-
Kato M., Pisliakov A.V., and Warshel A. The barrier for proton transport in aquaporins as a challenge for electrostatic models: The role of protein relaxation in mutational calculations Proteins: Struct., Funct., Bioinformatics 64 2006 829 844 (Pubitemid 44420926)
-
(2006)
Proteins: Structure, Function and Genetics
, vol.64
, Issue.4
, pp. 829-844
-
-
Kato, M.1
Pisliakov, A.V.2
Warshel, A.3
-
32
-
-
0347946756
-
Theory and Simulation of Water Permeation in Aquaporin-1
-
Zhu F.Q., Tajkhorshid E., and Schulten K. Theory and simulation of water permeation in aquaporin-1 Biophys. J. 86 2004 50 57 (Pubitemid 38071799)
-
(2004)
Biophysical Journal
, vol.86
, Issue.I1
, pp. 50-57
-
-
Zhu, F.1
Tajkhorshid, E.2
Schulten, K.3
-
33
-
-
11644271492
-
Multistate empirical valence bond model for proton transport in water
-
Schmitt U.W., and Voth G.A. Multistate empirical valence bond model for proton transport in water J. Phys. Chem. B 102 1998 5547 5551
-
(1998)
J. Phys. Chem. B
, vol.102
, pp. 5547-5551
-
-
Schmitt, U.W.1
Voth, G.A.2
-
34
-
-
0001213767
-
The computer simulation of proton transport in water
-
Schmitt U.W., and Voth G.A. The computer simulation of proton transport in water J. Chem. Phys. 111 1999 9361 9381 (Pubitemid 129592425)
-
(1999)
Journal of Chemical Physics
, vol.111
, Issue.20
, pp. 9361-9381
-
-
Schmitt, U.W.1
Voth, G.A.2
-
35
-
-
0037159065
-
A second generation multistate empirical valence bond model for proton transport in aqueous systems
-
DOI 10.1063/1.1497157
-
Day T.J.F., Soudackov A.V., Cuma M., Schmitt U.W., and Voth G.A. A second generation multistate empirical valence bond model for proton transport in aqueous systems J. Chem. Phys. 117 2002 5839 5849 (Pubitemid 35170685)
-
(2002)
Journal of Chemical Physics
, vol.117
, Issue.12
, pp. 5839-5849
-
-
Day, T.J.F.1
Soudackov, A.V.2
Cuma, M.3
Schmitt, U.W.4
Voth, G.A.5
-
36
-
-
33644989063
-
Computer simulation of proton solvation and transport in aqueous and biomolecular systems
-
Voth G.A. Computer simulation of proton solvation and transport in aqueous and biomolecular systems Acc. Chem. Res. 39 2006 143 150
-
(2006)
Acc. Chem. Res.
, vol.39
, pp. 143-150
-
-
Voth, G.A.1
-
37
-
-
34249092919
-
Proton solvation and transport in aqueous and biomolecular systems: Insights from computer simulations
-
DOI 10.1021/jp070104x
-
Swanson J.M.J., Maupin C.M., Chen H.N., Petersen M.K., Xu J.C., Wu Y.J., and Voth G.A. Proton solvation and transport in aqueous and biomolecular systems: Insights from computer simulations J. Phys. Chem. B 111 2007 4300 4314 (Pubitemid 46787622)
-
(2007)
Journal of Physical Chemistry B
, vol.111
, Issue.17
, pp. 4300-4314
-
-
Swanson, J.M.J.1
Maupin, C.M.2
Chen, H.3
Petersen, M.K.4
Xu, J.5
Wu, Y.6
Voth, G.A.7
-
38
-
-
11744384413
-
The Grotthuss mechanism
-
Agmon N. The Grotthuss mechanism Chem. Phys. Lett. 244 1995 456 462
-
(1995)
Chem. Phys. Lett.
, vol.244
, pp. 456-462
-
-
Agmon, N.1
-
40
-
-
0029011701
-
A second generation force field for the simulation of proteins, nucleic acids, and organic molecules
-
Cornell W.D., Cieplak P., and Kollman P.A. A second generation force field for the simulation of proteins, nucleic acids, and organic molecules J. Am. Chem. Soc. 117 1995 5179 5197
-
(1995)
J. Am. Chem. Soc.
, vol.117
, pp. 5179-5197
-
-
Cornell, W.D.1
Cieplak, P.2
Kollman, P.A.3
-
41
-
-
0001060458
-
A Monte Carlo method for obtaining the interionic potential of mean force in ionic solution
-
Patey G.N., and Valleau J.P. A Monte Carlo method for obtaining the interionic potential of mean force in ionic solution J. Chem. Phys. 1975 2334 2339
-
(1975)
J. Chem. Phys.
, pp. 2334-2339
-
-
Patey, G.N.1
Valleau, J.P.2
-
42
-
-
0029633155
-
The calculation of the potential of mean force using computer-simulations
-
Roux B. The calculation of the potential of mean force using computer-simulations Comput. Phys. Commun. 91 1995 275 282
-
(1995)
Comput. Phys. Commun.
, vol.91
, pp. 275-282
-
-
Roux, B.1
-
43
-
-
68249149574
-
Concerted action of two cation filters in the aquaporin water channel
-
Wu B.H., Steinbronn C., Alsterfjord M., Zeuthen T., and Beitz E. Concerted action of two cation filters in the aquaporin water channel EMBO J. 28 2009 2188 2194
-
(2009)
EMBO J.
, vol.28
, pp. 2188-2194
-
-
Wu, B.H.1
Steinbronn, C.2
Alsterfjord, M.3
Zeuthen, T.4
Beitz, E.5
-
44
-
-
0842265496
-
Classical and modern methods in reaction rate theory
-
Berne B.J., Borkovec M., and Straub J.E. Classical and modern methods in reaction rate theory J. Phys. Chem. 92 1988 3711 3725
-
(1988)
J. Phys. Chem.
, vol.92
, pp. 3711-3725
-
-
Berne, B.J.1
Borkovec, M.2
Straub, J.E.3
-
45
-
-
0026011790
-
General continuum theory for multiion channel. I. Theory
-
Levitt D.G. General continuum theory for multiion channel. I. Theory Biophys. J. 59 1991 271 277
-
(1991)
Biophys. J.
, vol.59
, pp. 271-277
-
-
Levitt, D.G.1
-
46
-
-
0030038849
-
Structure, energetics, and dynamics of lipid-protein interactions: A molecular dynamics study of the gramicidin A channel in a DMPC bilayer
-
DOI 10.1002/(SICI)1097-0134(199601)24:1<92::AID-PROT7>3.0.CO;2-Q
-
Woolf T.B., and Roux B. Structure, energetics, and dynamics of lipid-protein interactions: A molecular dynamics study of the gramicidin A channel in a DMPC bilayer Proteins: Struct., Funct., Genet. 24 1996 92 114 (Pubitemid 26044598)
-
(1996)
Proteins: Structure, Function and Genetics
, vol.24
, Issue.1
, pp. 92-114
-
-
Woolf, T.B.1
Roux, B.2
-
48
-
-
0022522698
-
Interpretation of biological ion channel flux data-reaction-rate versus continuum theory
-
Levitt D.G. Interpretation of biological ion channel flux data-reaction-rate versus continuum theory Annu. Rev. Biophys. Biophys. Chem. 15 1986 29 57
-
(1986)
Annu. Rev. Biophys. Biophys. Chem.
, vol.15
, pp. 29-57
-
-
Levitt, D.G.1
-
49
-
-
33748583013
-
Ion-transport in a gramicidin-like channel-dynamics and mobility
-
Roux B., and Karplus M. Ion-transport in a gramicidin-like channel-dynamics and mobility J. Phys. Chem. 95 1991 4856 4868
-
(1991)
J. Phys. Chem.
, vol.95
, pp. 4856-4868
-
-
Roux, B.1
Karplus, M.2
-
50
-
-
23244438863
-
Position-dependent diffusion coefficients and free energies from Bayesian analysis of equilibrium and replica molecular dynamics simulations
-
Hummer G. Position-dependent diffusion coefficients and free energies from Bayesian analysis of equilibrium and replica molecular dynamics simulations New J. Physics 7 2005
-
(2005)
New J. Physics
, vol.7
-
-
Hummer, G.1
-
51
-
-
0036789499
-
Molecular dynamics simulation of proton transport through the influenza A virus M2 channel
-
Smondyrev A.M., and Voth G.A. Molecular dynamics simulation of proton transport through the influenza A virus M2 channel Biophys. J. 83 2002 1987 1996
-
(2002)
Biophys. J.
, vol.83
, pp. 1987-1996
-
-
Smondyrev, A.M.1
Voth, G.A.2
-
52
-
-
0041843738
-
A computer simulation study of the hydrated proton in a synthetic proton channel
-
Wu Y., and Voth G.A. A computer simulation study of the hydrated proton in a synthetic proton channel Biophys. J. 85 2003 864 875 (Pubitemid 36909651)
-
(2003)
Biophysical Journal
, vol.85
, Issue.2
, pp. 864-875
-
-
Wu, Y.1
Voth, G.A.2
-
54
-
-
33746652164
-
+ conduction in the D-pathway of Cytochrome c Oxidase: A study of the wild type and N98D mutant enzymes
-
DOI 10.1016/j.bbabio.2006.05.028, PII S0005272806001642
-
+ conduction in the D-pathway of cytochrome c oxidase: a study of the wild type and N98D mutant enzymes Biochim. Biophys. Acta 1757 2006 852 859 (Pubitemid 44150607)
-
(2006)
Biochimica et Biophysica Acta - Bioenergetics
, vol.1757
, Issue.7
, pp. 852-859
-
-
Xu, J.1
Voth, G.A.2
-
55
-
-
33845968021
-
Charge delocalization in proton channels, II: The synthetic LS2 channel and proton selectivity
-
DOI 10.1529/biophysj.106.091942
-
Wu Y., Ilan B., and Voth G.A. Charge delocalization in proton channels, II: The synthetic LS2 channel and proton selectivity Biophys. J. 92 2007 61 69 (Pubitemid 46048416)
-
(2007)
Biophysical Journal
, vol.92
, Issue.1
, pp. 61-69
-
-
Wu, Y.1
Ilan, B.2
Voth, G.A.3
-
56
-
-
36549041108
-
Proton transport behavior through the influenza A M2 channel: Insights from molecular simulation
-
DOI 10.1529/biophysj.107.105742
-
Chen H.N., Wu Y.J., and Voth G.A. Proton transport behavior through the influenza a M2 channel: insights from molecular simulation Biophys. J. 93 2007 3470 3479 (Pubitemid 350190810)
-
(2007)
Biophysical Journal
, vol.93
, Issue.10
, pp. 3470-3479
-
-
Chen, H.1
Wu, Y.2
Voth, G.A.3
-
57
-
-
33947280355
-
Storage of an excess proton in the hydrogen-bonded network of the D-pathway of cytochrome c oxidase: Identification of a protonated water cluster
-
DOI 10.1021/ja067360s
-
Xu J.C., Sharpe M.A., Qin L., Ferguson-Miller S., and Voth G.A. Storage of an excess proton in the hydrogen-bonded network of the D-pathway of cytochrome c oxidase: identification of a protonated water cluster J. Am. Chem. Soc. 129 2007 2910 2913 (Pubitemid 46417967)
-
(2007)
Journal of the American Chemical Society
, vol.129
, Issue.10
, pp. 2910-2913
-
-
Xu, J.1
Sharpe, M.A.2
Qin, L.3
Ferguson-Miller, S.4
Voth, G.A.5
-
58
-
-
50249099321
-
Origins of enhanced proton transport in the Y7F mutant of human carbonic anhydrase II
-
Maupin C.M., Saunders M.G., Thorpe I.F., McKenna R., Silverman D.N., and Voth G.A. Origins of enhanced proton transport in the Y7F mutant of human carbonic anhydrase II J. Am. Chem. Soc. 130 2008 11399 11408
-
(2008)
J. Am. Chem. Soc.
, vol.130
, pp. 11399-11408
-
-
Maupin, C.M.1
Saunders, M.G.2
Thorpe, I.F.3
McKenna, R.4
Silverman, D.N.5
Voth, G.A.6
-
59
-
-
38749152834
-
Redox-coupled proton pumping in cytochrome c oxidase: Further insights from computer simulation
-
Xu J., and Voth G.A. Redox-coupled proton pumping in cytochrome c oxidase: further insights from computer simulation Biochim. Biophys. Acta 1777 2008 196 201
-
(2008)
Biochim. Biophys. Acta
, vol.1777
, pp. 196-201
-
-
Xu, J.1
Voth, G.A.2
-
60
-
-
0001603545
-
DL-POLY: Application to molecular simulation
-
Smith W., Yong C.W., and Rodger P.M. DL-POLY: application to molecular simulation Mol. Sim. 28 2002 385 471
-
(2002)
Mol. Sim.
, vol.28
, pp. 385-471
-
-
Smith, W.1
Yong, C.W.2
Rodger, P.M.3
-
62
-
-
34548379443
-
A short description of DL-POLY
-
Smith W., and Todorov I.T. A short description of DL-POLY Mol. Sim. 32 2006 935 943
-
(2006)
Mol. Sim.
, vol.32
, pp. 935-943
-
-
Smith, W.1
Todorov, I.T.2
-
63
-
-
34548399330
-
DL-POLY-applications to molecular simulation II
-
Smith W. DL-POLY-applications to molecular simulation II Mol. Sim. 32 2006 933
-
(2006)
Mol. Sim.
, vol.32
, pp. 933
-
-
Smith, W.1
-
64
-
-
0000035913
-
Temperature dependence of TIP3P, SPC, and TIP4P water from NPT Monte Carlo simulations: Seeking temperatures of maximum density
-
Jorgensen W.L., and Jenson C. Temperature dependence of TIP3P, SPC, and TIP4P water from NPT Monte Carlo simulations: seeking temperatures of maximum density J. Comput. Chem. 19 1998 1179 1186 (Pubitemid 128604734)
-
(1998)
Journal of Computational Chemistry
, vol.19
, Issue.10
, pp. 1179-1186
-
-
Jorgensen, W.L.1
Jenson, C.2
-
65
-
-
33846823909
-
Particle mesh Ewald: An N-log(N) method for Ewald sums in large systems
-
Tom D., Darrin Y., and Lee P. Particle mesh Ewald: An N-log(N) method for Ewald sums in large systems J. Chem. Phys. 98 1993 10089 10092
-
(1993)
J. Chem. Phys.
, vol.98
, pp. 10089-10092
-
-
Tom, D.1
Darrin, Y.2
Lee, P.3
-
66
-
-
0001538909
-
Canonical dynamics: Equilibrium phase-space distributions
-
Hoover W.G. Canonical dynamics: equilibrium phase-space distributions Phys. Rev. 31 1985 1695 1697
-
(1985)
Phys. Rev.
, vol.31
, pp. 1695-1697
-
-
Hoover, W.G.1
-
67
-
-
34547809547
-
A unified formulation of the constant temperature molecular dynamics methods
-
Shuichi N. A unified formulation of the constant temperature molecular dynamics methods J. Chem. Phys. 81 1984 511 519
-
(1984)
J. Chem. Phys.
, vol.81
, pp. 511-519
-
-
Shuichi, N.1
-
69
-
-
84986519238
-
The weighted histogram analysis method for free-energy calculations on biomolecules. I. The method
-
Kumar S., Bouzida D., Swendsen R.H., Kollman P.A., and Rosenberg J.M. The weighted histogram analysis method for free-energy calculations on biomolecules. I. The method J. Comput. Chem. 13 1992 1011 1021
-
(1992)
J. Comput. Chem.
, vol.13
, pp. 1011-1021
-
-
Kumar, S.1
Bouzida, D.2
Swendsen, R.H.3
Kollman, P.A.4
Rosenberg, J.M.5
-
70
-
-
33646192258
-
Ion permeation through a narrow channel: Using gramicidin to ascertain all-atom molecular dynamics potential of mean force methodology and biomolecular force fields
-
Allen T.W., Andersen O.S., and Roux B. Ion permeation through a narrow channel: using gramicidin to ascertain all-atom molecular dynamics potential of mean force methodology and biomolecular force fields Biophys. J. 90 2006 3447 3468
-
(2006)
Biophys. J.
, vol.90
, pp. 3447-3468
-
-
Allen, T.W.1
Andersen, O.S.2
Roux, B.3
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