A higher significance of anaerobes: The clone library analysis of bacterial pleurisy

Chest

Volumn 139, Issue 3, 2011, Pages 600-608

  Kawanami, Toshinori ^a   Fukuda, Kazumasa ^a   Yatera, Kazuhiro ^a   Kido, Masamitsu ^a   Mukae, Hiroshi ^a   Taniguchi, Hatsumi ^a  

^a UNIVERSITY OF OCCUPATIONAL AND ENVIRONMENTAL HEALTH   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

C REACTIVE PROTEIN; LACTATE DEHYDROGENASE; RNA 16S;

ADULT; AGED; AMPLIFIED FRAGMENT LENGTH POLYMORPHISM; ANAEROBIC BACTERIUM; ARTICLE; BACTERIAL COUNT; BACTERIAL FLORA; BACTERIAL PLEURAL EFFUSION; BACTERIAL PLEURISY; BACTERIUM CULTURE; BACTERIUM DETECTION; CLINICAL ARTICLE; COMORBIDITY; CONTROLLED STUDY; DNA SEQUENCE; FEMALE; FEVER; GENE LIBRARY; HUMAN; MALE; MOLECULAR LIBRARY; NUCLEOTIDE SEQUENCE; PARAPNEUMONIC PLEURAL EFFUSION; PLEURA EFFUSION; PLEURA EMPYEMA; PLEURA FLUID; PLEURISY; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; PROTEIN BLOOD LEVEL; SIMPLE PARAPNEUMONIC PLEURAL EFFUSION;

EID: 79952206477     PISSN: 00123692     EISSN: 19313543     Source Type: Journal    
DOI: 10.1378/chest.10-0460     Document Type: Article

References (32)

1. Ashbaugh DG. Empyema thoracis. Factors influencing morbidity and mortality. Chest. 1991;99(5):1162-1165.
2. Bouros D, Schiza S, Patsourakis G, Chalkiadakis G, Panagou P, Siafakas NM. Intrapleural streptokinase versus urokinase in the treatment of complicated parapneumonic effusions:a prospective, double-blind study. Am J Respir Crit Care Med. 1997;155(1):291-295. (Pubitemid 27053179)
3. Davies CWH, Kearney SE, Gleeson FV, Davies RJ. Predictors of outcome and long-term survival in patients with pleural infection. Am J Respir Crit Care Med. 1999;160(5 pt 1): 1682-1687.
4. Davies CWH, Gleeson FV, Davies RJO;Pleural Diseases Group, Standards of Care Committee, British Thoracic Society. BTS guidelines for the management of pleural infection. Thorax. 2003;58(suppl 2):ii18-ii28.
5. Mandal AK, Thadepalli H, Mandal AK, Chettipally U. Outcome of primary empyema thoracis:therapeutic and microbiologic aspects. Ann Thorac Surg. 1998;66(5):1782-1786. (Pubitemid 29030189)
6. Ahmed RA, Marrie TJ, Huang JQ. Thoracic empyema in patients with community-acquired pneumonia. Am J Med. 2006;119(10):877-883. (Pubitemid 44415617)
7. Light RW, Girard WM, Jenkinson SG, George RB. Parapneumonic effusions. Am J Med. 1980;69(4):507-512. (Pubitemid 10018705)
8. Maskell NA, Davies CWH, Nunn AJ, et al;First Multicenter Intrapleural Sepsis Trial(MIST1) Group. U.K. Controlled trial of intrapleural streptokinase for pleural infection. N Engl J Med. 2005;352(9):865-874. (Pubitemid 40300295)
9. Barnes TW, Olson EJ, Morgenthaler TI, Edson RS, Decker PA, Ryu JH. Low yield of microbiologic studies on pleural fluid specimens. Chest. 2005;127(3):916-921. (Pubitemid 40775524)
10. Byington CL, Spencer LY, Johnson TA, et al. An epidemiological investigation of a sustained high rate of pediatric parapneumonic empyema:risk factors and microbiological associations. Clin Infect Dis. 2002;34(4):434-440. (Pubitemid 34112262)
11. Foster S, Maskell N. Bacteriology of complicated parapneumonic effusions. Curr Opin Pulm Med. 2007;13(4):319-323. (Pubitemid 46847298)
12. Jiménez D, Díaz G, García-Rull S, Vidal R, Sueiro A, Light RW. Routine use of pleural fluid cultures. Are they indicated? Limited yield, minimal impact on treatment decisions. Respir Med. 2006;100(11):2048- 2052. (Pubitemid 44490274)
13. Medford A, Maskell N. Pleural effusion. Postgrad Med J. 2005;81(961):702-710. (Pubitemid 41659031)
14. Thomson AH, Hull J, Kumar MR, Wallis C, Balfour Lynn IM. Randomised trial of intrapleural urokinase in the treatment of childhood empyema. Thorax. 2002;57(4):343-347. (Pubitemid 34298933)
15. Boyanova L, Djambazov V, Gergova G, et al. Anaerobic microbiology in 198 cases of pleural empyema:a Bulgarian study. Anaerobe. 2004;10(5):261-267. (Pubitemid 39221786)
16. Harris KA, Hartley JC. Development of broad-range 16S rDNA PCR for use in the routine diagnostic clinical microbiology service. J Med Microbiol. 2003;52(pt 8):685-691. (Pubitemid 36981477)
17. Maskell NA, Batt S, Hedley EL, Davies CW, Gillespie SH, Davies RJ. The bacteriology of pleural infection by genetic and standard methods and its mortality significance. Am J Respir Crit Care Med. 2006;174(7):817-823. (Pubitemid 44511664)
18. Saglani S, Harris KA, Wallis C, Hartley JC. Empyema:the use of broad range 16S rDNA PCR for pathogen detection. Arch Dis Child. 2005;90(1):70-73. (Pubitemid 40052259)
19. Kawanami T, Fukuda K, Yatera K, et al. Severe pneumonia with Leptotrichia sp. detected predominantly in bronchoalveolar lavage fluid by use of 16S rRNA gene sequencing analysis. J Clin Microbiol. 2009;47(2):496-498.
20. Kassinen A, Krogius-Kurikka L, Mäkivuokko H, et al. The fecal microbiota of irritable bowel syndrome patients differs significantly from that of healthy subjects. Gastroenterology. 2007;133(1):24-33. (Pubitemid 47031125)
21. Acinas SG, Antón J, Rodríguez-Valera F. Diversity of free-living and attached bacteria in offshore Western Mediterranean waters as depicted by analysis of genes encoding 16S rRNA. Appl Environ Microbiol. 1999;65(2):514-522. (Pubitemid 29075091)
22. Gophna U, Sommerfeld K, Gophna S, Doolittle WF, Veldhuyzen van Zanten SJ. Differences between tissue-associated intestinal microfloras of patients with Crohn's disease and ulcerative colitis. J Clin Microbiol. 2006;44(11):4136-4141. (Pubitemid 44737260)
23. Akiyama T, Miyamoto H, Fukuda K, et al. Development of a novel PCR method to comprehensively analyze salivary bacterial flora and its application to patients with odontogenic infections. Oral Surg Oral Med Oral Pathol Oral Radiol Endod. 2010;109(5):669-676.
24. Paju S, Bernstein JM, Haase EM, Scannapieco FA. Molecular analysis of bacterial flora associated with chronically inflamed maxillary sinuses. J Med Microbiol. 2003;52(pt 7):591-597. (Pubitemid 36871899)
25. Munson MA, Banerjee A, Watson TF, Wade WG. Molecular analysis of the microflora associated with dental caries. J Clin Microbiol. 2004;42(7):3023- 3029. (Pubitemid 38938052)
26. Fredricks DN, Fiedler TL, Marrazzo JM. Molecular identification of bacteria associated with bacterial vaginosis. N Engl J Med. 2005;353(18):1899- 1911. (Pubitemid 41565955)
27. Harris JK, De Groote MA, Sagel SD, et al. Molecular identification of bacteria in bronchoalveolar lavage fluid from children with cystic fibrosis. Proc Natl Acad Sci U S A. 2007; 104(51):20529-20533.
28. Gopi A, Madhavan SM, Sharma SK, Sahn SA. Diagnosis and treatment of tuberculous pleural effusion in 2006. Chest. 2007;131(3):880-889.
29. Lane DJ. 16S/23S rRNA sequencing. In:Strackebraundt E, Goodfellow M, eds. Nucleic Acid Techniques in Bacterial Systematics. New York, NY :John Wiley &Sons Ltd.;1991 : 115-175.
30. Tu CY, Hsu WH, Hsia TC, et al. The changing pathogens of complicated parapneumonic effusions or empyemas in a medical intensive care unit. Intensive Care Med. 2006;32(4): 570-576.
31. Bittar F, Richet H, Dubus JC, et al. Molecular detection of multiple emerging pathogens in sputa from cystic fibrosis patients. PLoS ONE. 2008;3(8):e2908.
32. Tunney MM, Field TR, Moriarty TF, et al. Detection of anaerobic bacteria in high numbers in sputum from patients with cystic fibrosis. Am J Respir Crit Care Med. 2008;177(9):995-1001. (Pubitemid 351717594)