-
1
-
-
0842328803
-
Structure activation, and biology of calpain
-
Suzuki, K.; Hata, S.; Kawabata, Y.; Sorimachi, H. Structure, activation, and biology of calpain. Diabetes 2004, 53 (Suppl. 1), S12-S18.
-
(2004)
Diabetes
, vol.53
, Issue.SUPPL. 1
-
-
Suzuki, K.1
Hata, S.2
Kawabata, Y.3
Sorimachi, H.4
-
2
-
-
33947221587
-
Calpain activity in retinal degeneration
-
DOI 10.1002/jnr.21151
-
Paquet-Durand, F.; Johnson, L.; Ekstrom, P. Calpain activity in retinal degeneration. J. Neurosci. Res. 2007, 85, 693-702. (Pubitemid 46426068)
-
(2007)
Journal of Neuroscience Research
, vol.85
, Issue.4
, pp. 693-702
-
-
Paquet-Durand, F.1
Johnson, L.2
Ekstrom, P.3
-
3
-
-
77953240485
-
Calpain activation in experimental glaucoma
-
Huang, W.; Fileta, J.; Rawe, I.; Qu, J.; Grosskreutz, C.L. Calpain activation in experimental glaucoma. Invest. Ophthalmol. Vis. Sci. 2010, 51, 3049-3054.
-
(2010)
Invest. Ophthalmol. Vis. Sci.
, vol.51
, pp. 3049-3054
-
-
Huang, W.1
Fileta, J.2
Rawe, I.3
Qu, J.4
Grosskreutz, C.L.5
-
4
-
-
33748933251
-
Subcellular mobility of the calpain/calpastatin network: An organelle transient
-
DOI 10.1002/bies.20440
-
Hood, J.L.; Brooks, W.H.; Roszman, T.L. Subcellular mobility of the calpain/calpastatin network: An organelle transient. Bioessays 2006, 28, 850-859. (Pubitemid 44433747)
-
(2006)
BioEssays
, vol.28
, Issue.8
, pp. 850-859
-
-
Hood, J.L.1
Brooks, W.H.2
Roszman, T.L.3
-
5
-
-
33846872163
-
Methods for mapping protease specificity
-
DOI 10.1016/j.cbpa.2006.11.021, PII S1367593106001852
-
Diamond, S.L. Methods for mapping protease specificity. Curr. Opin. Chem. Biol. 2007, 11, 46-51. (Pubitemid 46223545)
-
(2007)
Current Opinion in Chemical Biology
, vol.11
, Issue.1
, pp. 46-51
-
-
Diamond, S.L.1
-
6
-
-
1842864784
-
Phage display substrate: A blind method for determining protease specificity
-
DOI 10.1515/BC.2002.119
-
Deperthes, D. Phage display substrate: A blind method for determining protease specificity. Biol. Chem. 2002, 383, 1107-1112. (Pubitemid 35215055)
-
(2002)
Biological Chemistry
, vol.383
, Issue.7-8
, pp. 1107-1112
-
-
Deperthes, D.1
-
7
-
-
1642574224
-
Isolating Substrates for an Engineered α-Lytic Protease by Phage Display
-
DOI 10.1023/A:1023475030579
-
Lien, S.; Francis, G.L.; Graham, L.D.; Wallace, J.C. Isolating substrates for an engineered alphalytic protease by phage display. J. Protein. Chem. 2003, 22, 155-166. (Pubitemid 38115212)
-
(2003)
Journal of Protein Chemistry
, vol.22
, Issue.2
, pp. 155-166
-
-
Lien, S.1
Francis, G.L.2
Graham, L.D.3
Wallace, J.C.4
-
8
-
-
4344603667
-
Substrate specificity of the Escherichia coli outer membrane protease OmpT
-
DOI 10.1128/JB.186.17.5919-5925.2004
-
McCarter, J.D.; Stephens, D.; Shoemaker, K.; Rosenberg, S.; Kirsch, J.F.; Georgiou, G. Substrate specificity of the Escherichia coli outer membrane protease OmpT. J. Bacteriol. 2004, 186, 5919-5925. (Pubitemid 39128665)
-
(2004)
Journal of Bacteriology
, vol.186
, Issue.17
, pp. 5919-5925
-
-
McCarter, J.D.1
Stephens, D.2
Shoemaker, K.3
Rosenberg, S.4
Kirsch, J.F.5
Georgiou, G.6
-
9
-
-
28244495067
-
Elucidation of the substrate specificity of the C1s protease of the classical complement pathway
-
DOI 10.1074/jbc.M506131200
-
Kerr, F.K.; O'Brien, G.; Quinsey, N.S.; Whisstock, J.C.; Boyd, S.; de la Banda, M.G.; Kaiserman, D.; Matthews, A.Y.; Bird, P.I.; Pike, R.N. Elucidation of the substrate specificity of the C1s protease of the classical complement pathway. J. Biol. Chem. 2005, 280, 39510-39514. (Pubitemid 41713909)
-
(2005)
Journal of Biological Chemistry
, vol.280
, Issue.47
, pp. 39510-39514
-
-
Kerr, F.K.1
O'Brien, G.2
Quinsey, N.S.3
Whisstock, J.C.4
Boyd, S.5
De La Banda, M.G.6
Kaiserman, D.7
Matthews, A.Y.8
Bird, P.I.9
Pike, R.N.10
-
10
-
-
38849114908
-
Autoantibody approach for serum-based detection of head and neck cancer
-
DOI 10.1158/1055-9965.EPI-07-0318
-
Lin, H.S.; Talwar, H.S.; Tarca, A.L.; Ionan, A.; Chatterjee, M.; Ye, B.; Wojciechowski, J.; Mohapatra, S.; Basson, M.D.; Yoo, G.H.; Peshek, B; Lonardo, F.; Pan, C.J.; Folbe, A.J.; Draghici, S.; Abrams, J.; Tainsky, M.A. Autoantibody approach for serum-based detection of head and neck cancer. Cancer Epidemiol. Biomarkers Prev. 2007, 16, 2396-2405. (Pubitemid 351196373)
-
(2007)
Cancer Epidemiology Biomarkers and Prevention
, vol.16
, Issue.11
, pp. 2396-2405
-
-
Lin, H.-S.1
Talwar, H.S.2
Tarca, A.L.3
Ionan, A.4
Chatterjee, M.5
Ye, B.6
Wojciechowski, J.7
Mohapatra, S.8
Basson, M.D.9
Yoo, G.H.10
Peshek, B.11
Lonardo, F.12
Pan, C.-J.G.13
Folbe, A.J.14
Draghici, S.15
Abrams, J.16
Tainsky, M.A.17
-
11
-
-
42149134182
-
Evaluation of T7 and lambda phage display systems for survey of autoantibody profiles in cancer patients
-
Kalnina, Z.; Silina, K.; Meistere, I.; Zayakin, P.; Rivosh, A.; Abols, A.; Leja, M.; Minenkova, O.; Schadendorf, D.; Line, A. Evaluation of T7 and lambda phage display systems for survey of autoantibody profiles in cancer patients. J. Immunol. Methods 2008, 334, 37-50.
-
(2008)
J. Immunol. Methods
, vol.334
, pp. 37-50
-
-
Kalnina, Z.1
Silina, K.2
Meistere, I.3
Zayakin, P.4
Rivosh, A.5
Abols, A.6
Leja, M.7
Minenkova, O.8
Schadendorf, D.9
Line, A.10
-
12
-
-
76649127063
-
New perspective for phage display as an efficient and versatile technology of functional proteomics
-
Li, W.; Caberoy, N.B. New perspective for phage display as an efficient and versatile technology of functional proteomics. Appl. Microbiol. Biotechnol. 2010, 85, 909-919.
-
(2010)
Appl. Microbiol. Biotechnol.
, vol.85
, pp. 909-919
-
-
Li, W.1
Caberoy, N.B.2
-
13
-
-
73249133960
-
Efficient identification of tubby-binding proteins by an improved system of T7 phage display
-
Caberoy, N.B.; Zhou, Y.; Jiang, X.; Alvarado, G.; Li, W. Efficient identification of tubby-binding proteins by an improved system of T7 phage display. J. Mol. Recognit. 2010, 23, 74-83.
-
(2010)
J. Mol. Recognit.
, vol.23
, pp. 74-83
-
-
Caberoy, N.B.1
Zhou, Y.2
Jiang, X.3
Alvarado, G.4
Li, W.5
-
14
-
-
67649229597
-
Efficient identification of phosphatidylserine-binding proteins by ORF phage display
-
Caberoy, N.B.; Zhou, Y.; Alvarado, G.; Fan, X.; Li, W. Efficient identification of phosphatidylserine-binding proteins by ORF phage display. Biochem. Biophys. Res. Commun. 2009, 386, 197-201.
-
(2009)
Biochem. Biophys. Res. Commun.
, vol.386
, pp. 197-201
-
-
Caberoy, N.B.1
Zhou, Y.2
Alvarado, G.3
Fan, X.4
Li, W.5
-
15
-
-
70450252025
-
Identification of tubby and tubby-like protein 1 as eat-me signals by phage display
-
Caberoy, N.B.; Maiguel, D.; Kim, Y.; Li, W. Identification of tubby and tubby-like protein 1 as eat-me signals by phage display. Exp. Cell Res. 2010, 316, 245-257.
-
(2010)
Exp. Cell Res.
, vol.316
, pp. 245-257
-
-
Caberoy, N.B.1
Maiguel, D.2
Kim, Y.3
Li, W.4
-
16
-
-
78651374167
-
Identification of Hnrph3 as an autoantigen for acute anterior uveitis
-
Kim, Y.; Caberoy, N.B.; Alvarado, G.; Davis, J.L.; Feuer, W.J.; Li, W. Identification of Hnrph3 as an autoantigen for acute anterior uveitis. Clin. Immunol. 2011, 138, 60-66.
-
(2011)
Clin. Immunol.
, vol.138
, pp. 60-66
-
-
Kim, Y.1
Caberoy, N.B.2
Alvarado, G.3
Davis, J.L.4
Feuer, W.J.5
Li, W.6
-
17
-
-
0002059514
-
T7Select phage display system: A powerful new protein display system based on bacteriophage T7
-
Rosenberg, A.; Griffin, K.; Studier, F.W.; McCormick, M.; Berg, J.; Novy, R.; Mierendorf, R. T7Select phage display system: A powerful new protein display system based on bacteriophage T7. InNovations 1996, 6, 1-6.
-
(1996)
InNovations
, vol.6
, pp. 1-6
-
-
Rosenberg, A.1
Griffin, K.2
Studier, F.W.3
McCormick, M.4
Berg, J.5
Novy, R.6
Mierendorf, R.7
-
18
-
-
0039310043
-
Use of peptide libraries to map the substrate specificity of a peptide- modifying enzyme: A 13 residue consensus peptide specifies biotinylation in Escherichia coli
-
Schatz, P.J. Use of peptide libraries to map the substrate specificity of a peptide-modifying enzyme: A 13 residue consensus peptide specifies biotinylation in Escherichia coli. Biotechnology (N Y) 1993, 11, 1138-1143. (Pubitemid 23307458)
-
(1993)
Bio/Technology
, vol.11
, Issue.10
, pp. 1138-1143
-
-
Schatz, P.J.1
-
19
-
-
9644307228
-
Biotin-tagged cDNA expression libraries displayed on lambda phage: A new tool for the selection of natural protein ligands
-
Ansuini, H.; Cicchini, C.; Nicosia, A.; Tripodi, M.; Cortese, R.; Luzzago, A. Biotin-tagged cDNA expression libraries displayed on lambda phage: A new tool for the selection of natural protein ligands. Nucl. Acids Res. 2002, 30, e78.
-
(2002)
Nucl. Acids Res.
, vol.30
-
-
Ansuini, H.1
Cicchini, C.2
Nicosia, A.3
Tripodi, M.4
Cortese, R.5
Luzzago, A.6
-
20
-
-
67651067972
-
Can phage display be used as a tool to functionally identify endogenous eat-me signals in phagocytosis?
-
Caberoy, N.B.; Zhou, Y.; Li, W. Can phage display be used as a tool to functionally identify endogenous eat-me signals in phagocytosis? J. Biomol. Screen. 2009, 14, 653-661.
-
(2009)
J. Biomol. Screen.
, vol.14
, pp. 653-661
-
-
Caberoy, N.B.1
Zhou, Y.2
Li, W.3
-
21
-
-
3242798339
-
Interaction of calpastatin with calpain: A review
-
DOI 10.1515/BC.2004.054
-
Wendt, A.; Thompson, V.F.; Goll, D.E. Interaction of calpastatin with calpain: A review. Biol. Chem. 2004, 385, 465-472. (Pubitemid 38967773)
-
(2004)
Biological Chemistry
, vol.385
, Issue.6
, pp. 465-472
-
-
Wendt, A.1
Thompson, V.F.2
Goll, D.E.3
-
22
-
-
0038337815
-
The calpain system
-
Goll, D.E.; Thompson, V.F.; Li, H.; Wei, W.; Cong, J. The calpain system. Physiol. Rev. 2003, 83, 731-801. (Pubitemid 36828925)
-
(2003)
Physiological Reviews
, vol.83
, Issue.3
, pp. 731-801
-
-
Goll, D.E.1
Thompson, V.F.2
Li, H.3
Wei, W.4
Cong, J.5
-
23
-
-
33846821908
-
Proteomic discovery of protease substrates
-
DOI 10.1016/j.cbpa.2006.11.037, PII S1367593106001943
-
Schilling, O.; Overall, C.M. Proteomic discovery of protease substrates. Curr. Opin. Chem. Biol. 2007, 11, 36-45. (Pubitemid 46216133)
-
(2007)
Current Opinion in Chemical Biology
, vol.11
, Issue.1
, pp. 36-45
-
-
Schilling, O.1
Overall, C.M.2
-
24
-
-
70549111633
-
Methods for the proteomic identification of protease substrates
-
Agard, N.J.; Wells, J.A. Methods for the proteomic identification of protease substrates. Curr. Opin. Chem. Biol. 2009, 13, 503-509.
-
(2009)
Curr. Opin. Chem. Biol.
, vol.13
, pp. 503-509
-
-
Agard, N.J.1
Wells, J.A.2
-
25
-
-
58049215325
-
Identifying calpain substrates in intact S2 cells of Drosophila
-
Bozoky, Z.; Alexa, A.; Dancsok, J.; Gogl, G.; Klement, E.; Medzihradszky, K.F.; Friedrich, P. Identifying calpain substrates in intact S2 cells of Drosophila. Arch. Biochem. Biophys. 2009, 481, 219-225.
-
(2009)
Arch. Biochem. Biophys.
, vol.481
, pp. 219-225
-
-
Bozoky, Z.1
Alexa, A.2
Dancsok, J.3
Gogl, G.4
Klement, E.5
Medzihradszky, K.F.6
Friedrich, P.7
-
26
-
-
28844491633
-
Determination of peptide substrate specificity for μ-calpain by a peptide library-based approach: The importance of primed side interactions
-
DOI 10.1074/jbc.M506870200
-
Cuerrier, D.; Moldoveanu, T.; Davies, P.L. Determination of peptide substrate specificity for mucalpain by a peptide library-based approach: The importance of primed side interactions. J. Biol. Chem. 2005, 280, 40632-40641. (Pubitemid 41780554)
-
(2005)
Journal of Biological Chemistry
, vol.280
, Issue.49
, pp. 40632-40641
-
-
Cuerrier, D.1
Moldoveanu, T.2
Davies, P.L.3
-
27
-
-
77949528753
-
Next-generation phage display: Integrating and comparing available molecular tools to enable cost-effective high-throughput analysis
-
Dias-Neto, E.; Nunes, D.N.; Giordano, R.J.; Sun, J.; Botz, G.H.; Yang, K.; Setubal, J.C.; Pasqualini, R.; Arap, W. Next-generation phage display: Integrating and comparing available molecular tools to enable cost-effective high-throughput analysis. PLoS One 2009, 4, e8338.
-
(2009)
PLoS One
, vol.4
-
-
Dias-Neto, E.1
Nunes, D.N.2
Giordano, R.J.3
Sun, J.4
Botz, G.H.5
Yang, K.6
Setubal, J.C.7
Pasqualini, R.8
Arap, W.9
-
28
-
-
77954011652
-
Rapid interactome profiling by massive sequencing
-
Di Niro, R.; Sulic, A.M.; Mignone, F.; D'Angelo, S.; Bordoni, R.; Iacono, M.; Marzari, R.; Gaiotto, T.; Lavric, M.; Bradbury, A.R.; Biancone, L.; Zevin-Sonkin, D.; De Bellis, G.; Santoro, C.; Sblattero, D. Rapid interactome profiling by massive sequencing. Nucl. Acids Res. 2010, 38, e110.
-
(2010)
Nucl. Acids Res.
, vol.38
-
-
Di Niro, R.1
Sulic, A.M.2
Mignone, F.3
D'Angelo, S.4
Bordoni, R.5
Iacono, M.6
Marzari, R.7
Gaiotto, T.8
Lavric, M.9
Bradbury, A.R.10
Biancone, L.11
Zevin-Sonkin, D.12
De Bellis, G.13
Santoro, C.14
Sblattero, D.15
-
29
-
-
77956338533
-
High-resolution mapping of protein sequence-function relationships
-
Fowler, D.M.; Araya, C.L.; Fleishman, S.J.; Kellogg, E.H.; Stephany, J.J.; Baker, D.; Fields, S. High-resolution mapping of protein sequence-function relationships. Nat. Methods 2010, 7, 741-746.
-
(2010)
Nat. Methods
, vol.7
, pp. 741-746
-
-
Fowler, D.M.1
Araya, C.L.2
Fleishman, S.J.3
Kellogg, E.H.4
Stephany, J.J.5
Baker, D.6
Fields, S.7
-
30
-
-
78649714537
-
Tubby and tubby-like protein 1 are new MerTK ligands for phagocytosis
-
Caberoy, N.B.; Zhou, Y.; Li, W. Tubby and tubby-like protein 1 are new MerTK ligands for phagocytosis. EMBO J. 2010, 29, 3898-3910.
-
(2010)
EMBO J.
, vol.29
, pp. 3898-3910
-
-
Caberoy, N.B.1
Zhou, Y.2
Li, W.3
-
31
-
-
32544440280
-
Phage display systems and their applications
-
DOI 10.1007/s00253-005-0270-9
-
Paschke, M. Phage display systems and their applications. Appl. Microbiol. Biotechnol. 2006, 70, 2-11. (Pubitemid 43234524)
-
(2006)
Applied Microbiology and Biotechnology
, vol.70
, Issue.1
, pp. 2-11
-
-
Paschke, M.1
-
32
-
-
33747800052
-
T7 lytic phage-displayed peptide libraries exhibit less sequence bias than M13 filamentous phage-displayed peptide libraries
-
DOI 10.1002/pmic.200500606
-
Krumpe, L.R.; Atkinson, A.J.; Smythers, G.W.; Kandel, A.; Schumacher, K.M.; McMahon, J.B.; Makowski, L.; Mori, T. T7 lytic phage-displayed peptide libraries exhibit less sequence bias than M13 filamentous phage-displayed peptide libraries. Proteomics 2006, 6, 4210-4222. (Pubitemid 44277024)
-
(2006)
Proteomics
, vol.6
, Issue.15
, pp. 4210-4222
-
-
Krumpe, L.R.H.1
Atkinson, A.J.2
Smythers, G.W.3
Kandel, A.4
Schumacher, K.M.5
McMahon, J.B.6
Makowski, L.7
Mori, T.8
-
33
-
-
77949886815
-
Progress in phage display: Evolution of the technique and its application
-
Bratkovic, T. Progress in phage display: Evolution of the technique and its application. Cell. Mol. Life Sci. 2010, 67, 749-767.
-
(2010)
Cell. Mol. Life Sci.
, vol.67
, pp. 749-767
-
-
Bratkovic, T.1
-
34
-
-
20444431203
-
Identification of tribbles homolog 2 as an autoantigen in autoimmune uveitis by phage display
-
DOI 10.1016/j.molimm.2004.11.020, PII S0161589004004833
-
Zhang, Y.; Davis, J.L.; Li, W. Identification of tribbles homolog 2 as an autoantigen in autoimmune uveitis by phage display. Mol. Immunol. 2005, 42, 1275-1281. (Pubitemid 40798943)
-
(2005)
Molecular Immunology
, vol.42
, Issue.11
, pp. 1275-1281
-
-
Zhang, Y.1
Davis, J.L.2
Li, W.3
|