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Volumn 16, Issue 2, 2011, Pages 1739-1748

Identification of calpain substrates by ORF phage display

Author keywords

Calpain; Calpastatin; ORF phage display; Protease; Substrate

Indexed keywords

CALCIUM BINDING PROTEIN; CALPAIN; CALPASTATIN; ISOENZYME; PEPTIDE; PEPTIDE LIBRARY;

EID: 79952142009     PISSN: None     EISSN: 14203049     Source Type: Journal    
DOI: 10.3390/molecules16021739     Document Type: Article
Times cited : (10)

References (34)
  • 1
    • 0842328803 scopus 로고    scopus 로고
    • Structure activation, and biology of calpain
    • Suzuki, K.; Hata, S.; Kawabata, Y.; Sorimachi, H. Structure, activation, and biology of calpain. Diabetes 2004, 53 (Suppl. 1), S12-S18.
    • (2004) Diabetes , vol.53 , Issue.SUPPL. 1
    • Suzuki, K.1    Hata, S.2    Kawabata, Y.3    Sorimachi, H.4
  • 4
    • 33748933251 scopus 로고    scopus 로고
    • Subcellular mobility of the calpain/calpastatin network: An organelle transient
    • DOI 10.1002/bies.20440
    • Hood, J.L.; Brooks, W.H.; Roszman, T.L. Subcellular mobility of the calpain/calpastatin network: An organelle transient. Bioessays 2006, 28, 850-859. (Pubitemid 44433747)
    • (2006) BioEssays , vol.28 , Issue.8 , pp. 850-859
    • Hood, J.L.1    Brooks, W.H.2    Roszman, T.L.3
  • 5
    • 33846872163 scopus 로고    scopus 로고
    • Methods for mapping protease specificity
    • DOI 10.1016/j.cbpa.2006.11.021, PII S1367593106001852
    • Diamond, S.L. Methods for mapping protease specificity. Curr. Opin. Chem. Biol. 2007, 11, 46-51. (Pubitemid 46223545)
    • (2007) Current Opinion in Chemical Biology , vol.11 , Issue.1 , pp. 46-51
    • Diamond, S.L.1
  • 6
    • 1842864784 scopus 로고    scopus 로고
    • Phage display substrate: A blind method for determining protease specificity
    • DOI 10.1515/BC.2002.119
    • Deperthes, D. Phage display substrate: A blind method for determining protease specificity. Biol. Chem. 2002, 383, 1107-1112. (Pubitemid 35215055)
    • (2002) Biological Chemistry , vol.383 , Issue.7-8 , pp. 1107-1112
    • Deperthes, D.1
  • 7
    • 1642574224 scopus 로고    scopus 로고
    • Isolating Substrates for an Engineered α-Lytic Protease by Phage Display
    • DOI 10.1023/A:1023475030579
    • Lien, S.; Francis, G.L.; Graham, L.D.; Wallace, J.C. Isolating substrates for an engineered alphalytic protease by phage display. J. Protein. Chem. 2003, 22, 155-166. (Pubitemid 38115212)
    • (2003) Journal of Protein Chemistry , vol.22 , Issue.2 , pp. 155-166
    • Lien, S.1    Francis, G.L.2    Graham, L.D.3    Wallace, J.C.4
  • 12
    • 76649127063 scopus 로고    scopus 로고
    • New perspective for phage display as an efficient and versatile technology of functional proteomics
    • Li, W.; Caberoy, N.B. New perspective for phage display as an efficient and versatile technology of functional proteomics. Appl. Microbiol. Biotechnol. 2010, 85, 909-919.
    • (2010) Appl. Microbiol. Biotechnol. , vol.85 , pp. 909-919
    • Li, W.1    Caberoy, N.B.2
  • 13
    • 73249133960 scopus 로고    scopus 로고
    • Efficient identification of tubby-binding proteins by an improved system of T7 phage display
    • Caberoy, N.B.; Zhou, Y.; Jiang, X.; Alvarado, G.; Li, W. Efficient identification of tubby-binding proteins by an improved system of T7 phage display. J. Mol. Recognit. 2010, 23, 74-83.
    • (2010) J. Mol. Recognit. , vol.23 , pp. 74-83
    • Caberoy, N.B.1    Zhou, Y.2    Jiang, X.3    Alvarado, G.4    Li, W.5
  • 14
    • 67649229597 scopus 로고    scopus 로고
    • Efficient identification of phosphatidylserine-binding proteins by ORF phage display
    • Caberoy, N.B.; Zhou, Y.; Alvarado, G.; Fan, X.; Li, W. Efficient identification of phosphatidylserine-binding proteins by ORF phage display. Biochem. Biophys. Res. Commun. 2009, 386, 197-201.
    • (2009) Biochem. Biophys. Res. Commun. , vol.386 , pp. 197-201
    • Caberoy, N.B.1    Zhou, Y.2    Alvarado, G.3    Fan, X.4    Li, W.5
  • 15
    • 70450252025 scopus 로고    scopus 로고
    • Identification of tubby and tubby-like protein 1 as eat-me signals by phage display
    • Caberoy, N.B.; Maiguel, D.; Kim, Y.; Li, W. Identification of tubby and tubby-like protein 1 as eat-me signals by phage display. Exp. Cell Res. 2010, 316, 245-257.
    • (2010) Exp. Cell Res. , vol.316 , pp. 245-257
    • Caberoy, N.B.1    Maiguel, D.2    Kim, Y.3    Li, W.4
  • 18
    • 0039310043 scopus 로고
    • Use of peptide libraries to map the substrate specificity of a peptide- modifying enzyme: A 13 residue consensus peptide specifies biotinylation in Escherichia coli
    • Schatz, P.J. Use of peptide libraries to map the substrate specificity of a peptide-modifying enzyme: A 13 residue consensus peptide specifies biotinylation in Escherichia coli. Biotechnology (N Y) 1993, 11, 1138-1143. (Pubitemid 23307458)
    • (1993) Bio/Technology , vol.11 , Issue.10 , pp. 1138-1143
    • Schatz, P.J.1
  • 19
    • 9644307228 scopus 로고    scopus 로고
    • Biotin-tagged cDNA expression libraries displayed on lambda phage: A new tool for the selection of natural protein ligands
    • Ansuini, H.; Cicchini, C.; Nicosia, A.; Tripodi, M.; Cortese, R.; Luzzago, A. Biotin-tagged cDNA expression libraries displayed on lambda phage: A new tool for the selection of natural protein ligands. Nucl. Acids Res. 2002, 30, e78.
    • (2002) Nucl. Acids Res. , vol.30
    • Ansuini, H.1    Cicchini, C.2    Nicosia, A.3    Tripodi, M.4    Cortese, R.5    Luzzago, A.6
  • 20
    • 67651067972 scopus 로고    scopus 로고
    • Can phage display be used as a tool to functionally identify endogenous eat-me signals in phagocytosis?
    • Caberoy, N.B.; Zhou, Y.; Li, W. Can phage display be used as a tool to functionally identify endogenous eat-me signals in phagocytosis? J. Biomol. Screen. 2009, 14, 653-661.
    • (2009) J. Biomol. Screen. , vol.14 , pp. 653-661
    • Caberoy, N.B.1    Zhou, Y.2    Li, W.3
  • 21
    • 3242798339 scopus 로고    scopus 로고
    • Interaction of calpastatin with calpain: A review
    • DOI 10.1515/BC.2004.054
    • Wendt, A.; Thompson, V.F.; Goll, D.E. Interaction of calpastatin with calpain: A review. Biol. Chem. 2004, 385, 465-472. (Pubitemid 38967773)
    • (2004) Biological Chemistry , vol.385 , Issue.6 , pp. 465-472
    • Wendt, A.1    Thompson, V.F.2    Goll, D.E.3
  • 23
    • 33846821908 scopus 로고    scopus 로고
    • Proteomic discovery of protease substrates
    • DOI 10.1016/j.cbpa.2006.11.037, PII S1367593106001943
    • Schilling, O.; Overall, C.M. Proteomic discovery of protease substrates. Curr. Opin. Chem. Biol. 2007, 11, 36-45. (Pubitemid 46216133)
    • (2007) Current Opinion in Chemical Biology , vol.11 , Issue.1 , pp. 36-45
    • Schilling, O.1    Overall, C.M.2
  • 24
    • 70549111633 scopus 로고    scopus 로고
    • Methods for the proteomic identification of protease substrates
    • Agard, N.J.; Wells, J.A. Methods for the proteomic identification of protease substrates. Curr. Opin. Chem. Biol. 2009, 13, 503-509.
    • (2009) Curr. Opin. Chem. Biol. , vol.13 , pp. 503-509
    • Agard, N.J.1    Wells, J.A.2
  • 26
    • 28844491633 scopus 로고    scopus 로고
    • Determination of peptide substrate specificity for μ-calpain by a peptide library-based approach: The importance of primed side interactions
    • DOI 10.1074/jbc.M506870200
    • Cuerrier, D.; Moldoveanu, T.; Davies, P.L. Determination of peptide substrate specificity for mucalpain by a peptide library-based approach: The importance of primed side interactions. J. Biol. Chem. 2005, 280, 40632-40641. (Pubitemid 41780554)
    • (2005) Journal of Biological Chemistry , vol.280 , Issue.49 , pp. 40632-40641
    • Cuerrier, D.1    Moldoveanu, T.2    Davies, P.L.3
  • 27
    • 77949528753 scopus 로고    scopus 로고
    • Next-generation phage display: Integrating and comparing available molecular tools to enable cost-effective high-throughput analysis
    • Dias-Neto, E.; Nunes, D.N.; Giordano, R.J.; Sun, J.; Botz, G.H.; Yang, K.; Setubal, J.C.; Pasqualini, R.; Arap, W. Next-generation phage display: Integrating and comparing available molecular tools to enable cost-effective high-throughput analysis. PLoS One 2009, 4, e8338.
    • (2009) PLoS One , vol.4
    • Dias-Neto, E.1    Nunes, D.N.2    Giordano, R.J.3    Sun, J.4    Botz, G.H.5    Yang, K.6    Setubal, J.C.7    Pasqualini, R.8    Arap, W.9
  • 30
    • 78649714537 scopus 로고    scopus 로고
    • Tubby and tubby-like protein 1 are new MerTK ligands for phagocytosis
    • Caberoy, N.B.; Zhou, Y.; Li, W. Tubby and tubby-like protein 1 are new MerTK ligands for phagocytosis. EMBO J. 2010, 29, 3898-3910.
    • (2010) EMBO J. , vol.29 , pp. 3898-3910
    • Caberoy, N.B.1    Zhou, Y.2    Li, W.3
  • 31
    • 32544440280 scopus 로고    scopus 로고
    • Phage display systems and their applications
    • DOI 10.1007/s00253-005-0270-9
    • Paschke, M. Phage display systems and their applications. Appl. Microbiol. Biotechnol. 2006, 70, 2-11. (Pubitemid 43234524)
    • (2006) Applied Microbiology and Biotechnology , vol.70 , Issue.1 , pp. 2-11
    • Paschke, M.1
  • 32
    • 33747800052 scopus 로고    scopus 로고
    • T7 lytic phage-displayed peptide libraries exhibit less sequence bias than M13 filamentous phage-displayed peptide libraries
    • DOI 10.1002/pmic.200500606
    • Krumpe, L.R.; Atkinson, A.J.; Smythers, G.W.; Kandel, A.; Schumacher, K.M.; McMahon, J.B.; Makowski, L.; Mori, T. T7 lytic phage-displayed peptide libraries exhibit less sequence bias than M13 filamentous phage-displayed peptide libraries. Proteomics 2006, 6, 4210-4222. (Pubitemid 44277024)
    • (2006) Proteomics , vol.6 , Issue.15 , pp. 4210-4222
    • Krumpe, L.R.H.1    Atkinson, A.J.2    Smythers, G.W.3    Kandel, A.4    Schumacher, K.M.5    McMahon, J.B.6    Makowski, L.7    Mori, T.8
  • 33
    • 77949886815 scopus 로고    scopus 로고
    • Progress in phage display: Evolution of the technique and its application
    • Bratkovic, T. Progress in phage display: Evolution of the technique and its application. Cell. Mol. Life Sci. 2010, 67, 749-767.
    • (2010) Cell. Mol. Life Sci. , vol.67 , pp. 749-767
    • Bratkovic, T.1
  • 34
    • 20444431203 scopus 로고    scopus 로고
    • Identification of tribbles homolog 2 as an autoantigen in autoimmune uveitis by phage display
    • DOI 10.1016/j.molimm.2004.11.020, PII S0161589004004833
    • Zhang, Y.; Davis, J.L.; Li, W. Identification of tribbles homolog 2 as an autoantigen in autoimmune uveitis by phage display. Mol. Immunol. 2005, 42, 1275-1281. (Pubitemid 40798943)
    • (2005) Molecular Immunology , vol.42 , Issue.11 , pp. 1275-1281
    • Zhang, Y.1    Davis, J.L.2    Li, W.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.