Efficient identification of phosphatidylserine-binding proteins by ORF phage display

Biochemical and Biophysical Research Communications

Volumn 386, Issue 1, 2009, Pages 197-201

  Caberoy, Nora B ^a   Zhou, Yixiong ^a   Alvarado, Gabriela ^a   Fan, Xianqun ^b   Li, Wei ^a  

^a UNIVERSITY OF MIAMI MILLER SCHOOL OF MEDICINE   (United States)

^b SHANGHAI JIAO TONG UNIVERSITY SCHOOL OF MEDICINE   (China)

Author keywords

ORF phage display; Phage display; Phosphatidylcholine; Phosphatidylserine; Phosphatidylserine binding protein

Indexed keywords

ARGININE; COMPLEMENTARY DNA; GLUTATHIONE TRANSFERASE; HYBRID PROTEIN; LACTADHERIN; LIPOSOME; LYSINE; PHOSPHATIDYLCHOLINE; PHOSPHATIDYLSERINE;

AMINO ACID SEQUENCE; ARTICLE; BINDING AFFINITY; CONTROLLED STUDY; DNA LIBRARY; EMBRYO; MOUSE; NONHUMAN; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; PHAGE DISPLAY; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN BINDING; PROTEIN EXPRESSION; PROTEIN MOTIF;

AMINO ACID MOTIFS; AMINO ACID SEQUENCE; ANIMALS; ANTIGENS, SURFACE; GENE LIBRARY; MICE; MILK PROTEINS; MOLECULAR SEQUENCE DATA; OPEN READING FRAMES; PEPTIDE LIBRARY; PHOSPHATIDYLSERINES; PROTEIN BINDING; PROTEINS;

EID: 67649229597     PISSN: 0006291X     EISSN: 10902104     Source Type: Journal    
DOI: 10.1016/j.bbrc.2009.06.010     Document Type: Article

References (20)

1. Stace C.L., and Ktistakis N.T. Phosphatidic acid- and phosphatidylserine-binding proteins. Biochim. Biophys. Acta 1761 (2006) 913-926
2. Miyanishi M., Tada K., Koike M., Uchiyama Y., Kitamura T., and Nagata S. Identification of Tim4 as a phosphatidylserine receptor. Nature 450 (2007) 435-439
3. Park D., Tosello-Trampont A.C., Elliott M.R., Lu M., Haney L.B., Ma Z., Klibanov A.L., Mandell J.W., and Ravichandran K.S. BAI1 is an engulfment receptor for apoptotic cells upstream of the ELMO/Dock180/Rac module. Nature 450 (2007) 430-434
4. Laumonier C., Segers J., Laurent S., Michel A., Coppee F., Belayew A., Elst L.V., and Muller R.N. A new peptidic vector for molecular imaging of apoptosis, identified by phage display technology. J. Biomol. Screen. 11 (2006) 537-545
5. Thapa N., Kim S., So I.S., Lee B.H., Kwon I.C., Choi K., and Kim I.S. Discovery of a phosphatidylserine-recognizing peptide and its utility in molecular imaging of tumour apoptosis. J. Cell. Mol. Med. 12 (2008) 1649-1660
6. Paschke M. Phage display systems and their applications. Appl. Microbiol. Biotechnol. 70 (2006) 2-11
7. Zhang Y., Davis J.L., and Li W. Identification of tribbles homolog 2 as an autoantigen in autoimmune uveitis by phage display. Mol. Immunol. 42 (2005) 1275-1281
8. Lin H.S., Talwar H.S., Tarca A.L., Ionan A., Chatterjee M., Ye B., Wojciechowski J., Mohapatra S., Basson M.D., Yoo G.H., Peshek B., Lonardo F., Pan C.J., Folbe A.J., Draghici S., Abrams J., and Tainsky M.A. Autoantibody approach for serum-based detection of head and neck cancer. Cancer Epidemiol. Biomarkers Prev. 16 (2007) 2396-2405
9. Kalnina Z., Silina K., Meistere I., Zayakin P., Rivosh A., Abols A., Leja M., Minenkova O., Schadendorf D., and Line A. Evaluation of T7 and lambda phage display systems for survey of autoantibody profiles in cancer patients. J. Immunol. Methods 334 (2008) 37-50
10. Nakai Y., Nomura Y., Sato T., Shiratsuchi A., and Nakanishi Y. Isolation of a Drosophila gene coding for a protein containing a novel phosphatidylserine-binding motif. J. Biochem. 137 (2005) 593-599
11. N.B. Caberoy, Y. Zhou, W. Li, Can phage display be used as a tool to functionally identify endogenous eat-me signals in phagocytosis? J. Biomol. Screen., in press.
12. Li W., and Handschumacher R.E. Identification of two calcineurin B-binding proteins: tubulin and heat shock protein 60. Biochim. Biophys. Acta 1599 (2002) 72-81
13. Lee G., and Pollard H.B. Highly sensitive and stable phosphatidylserine liposome aggregation assay for annexins. Anal. Biochem. 252 (1997) 160-164
14. Gustincich S., Vatta P., Goruppi S., Wolf M., Saccone S., Della Valle G., Baggiolini M., and Schneider C. The human serum deprivation response gene (SDPR) maps to 2q32-q33 and codes for a phosphatidylserine-binding protein. Genomics 57 (1999) 120-129
15. Hanayama R., Tanaka M., Miwa K., Shinohara A., Iwamatsu A., and Nagata S. Identification of a factor that links apoptotic cells to phagocytes. Nature 417 (2002) 182-187
16. Lin X., Tombler E., Nelson P.J., Ross M., and Gelman I.H. A novel src- and ras-suppressed protein kinase C substrate associated with cytoskeletal architecture. J. Biol. Chem. 271 (1996) 28430-28438
17. Nauert J.B., Klauck T.M., Langeberg L.K., and Scott J.D. Gravin, an autoantigen recognized by serum from myasthenia gravis patients, is a kinase scaffold protein. Curr. Biol. 7 (1997) 52-62
18. Rizo J., and Sudhof T.C. C2-domains, structure and function of a universal Ca2+binding domain. J. Biol. Chem. 273 (1998) 15879-15882
19. Garufi G., Minenkova O., Lo Passo C., Pernice I., and Felici F. Display libraries on bacteriophage lambda capsid. Biotechnol. Annu. Rev. 11 (2005) 153-190
20. Ansuini H., Cicchini C., Nicosia A., Tripodi M., Cortese R., and Luzzago A. Biotin-tagged cDNA expression libraries displayed on lambda phage: a new tool for the selection of natural protein ligands. Nucleic Acids Res. 30 (2002) e78