-
1
-
-
0033214175
-
Functions of the exosome in rRNA, snoRNA and snRNA synthesis
-
DOI 10.1093/emboj/18.19.5399
-
Allmang, C., Kufel, J., Chanfreau, G., Mitchell, P., Petfalski, E., and, Tollervey, D., (1999) Functions of the exosome in rRNA, snoRNA and snRNA synthesis. EMBO J. 18, 5399-5410. (Pubitemid 29465589)
-
(1999)
EMBO Journal
, vol.18
, Issue.19
, pp. 5399-5410
-
-
Allmang, C.1
Kufel, J.2
Chanfreau, G.3
Mitchell, P.4
Petfalski, E.5
Tollervey, D.6
-
2
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
DOI 10.1093/nar/25.17.3389
-
Altschul, S.F., Madden, T.L., Schäffer, A.A., Zhang, J., Zhang, Z., Miller, W., and, Lipman, D.J., (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25, 3389-3402. (Pubitemid 27359211)
-
(1997)
Nucleic Acids Research
, vol.25
, Issue.17
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
3
-
-
0036703184
-
The expanding snoRNA world
-
DOI 10.1016/S0300-9084(02)01402-5, PII S0300908402014025
-
Bachellerie, J.P., Cavaillé, J., and, Hüttenhofer, A., (2002) The expanding snoRNA world. Biochimie, 84, 775-790. (Pubitemid 35363462)
-
(2002)
Biochimie
, vol.84
, Issue.8
, pp. 775-790
-
-
Bachellerie, J.-P.1
Cavaille, J.2
Huttenhofer, A.3
-
4
-
-
0028685490
-
Fitting a mixture model by expectation maximization to discover motifs in biopolymers
-
Bailey, T.L., and, Elkan, C., (1994) Fitting a mixture model by expectation maximization to discover motifs in biopolymers. Proc. Int. Conf. Intell. Syst. Mol. Biol. 2, 28-36.
-
(1994)
Proc. Int. Conf. Intell. Syst. Mol. Biol.
, vol.2
, pp. 28-36
-
-
Bailey, T.L.1
Elkan, C.2
-
5
-
-
20744440616
-
The cotranscriptional assembly of snoRNPs controls the biosynthesis of H/ACA snoRNAs in Saccharomyces cerevisiae
-
DOI 10.1128/MCB.25.13.5396-5403.2005
-
Ballarino, M., Moranto, M., Pagano, F., Fatica, A., and, Bozzoni, I., (2005) The cotranscriptional assembly of snoRNPs controls the biosynthesis of H/ACA snoRNAs in Saccharomyces cerevisiae. Mol. Cell. Biol. 25, 5396-5403. (Pubitemid 40853577)
-
(2005)
Molecular and Cellular Biology
, vol.25
, Issue.13
, pp. 5396-5403
-
-
Ballarino, M.1
Morlando, M.2
Pagano, F.3
Fatica, A.4
Bozzoni, I.5
-
6
-
-
67650100790
-
Processing of a dicistronic trna-snorna precursor: Combined analysis in vitro and in vivo reveals alternate pathways and coupling to assembly of snoRNP
-
Barbezier, N., Canino, G., Rodor, J., Jobet, E., Saez-Vasquez, J., Marchfelder, A., and, Echeverría, M., (2009) Processing of a dicistronic trna-snorna precursor: combined analysis in vitro and in vivo reveals alternate pathways and coupling to assembly of snoRNP. Plant Physiol. 150, 1598-1610.
-
(2009)
Plant Physiol.
, vol.150
, pp. 1598-1610
-
-
Barbezier, N.1
Canino, G.2
Rodor, J.3
Jobet, E.4
Saez-Vasquez, J.5
Marchfelder, A.6
Echeverría, M.7
-
7
-
-
0041534394
-
NUFIP1 (Nuclear FMRP Interacting Protein 1) is a nucleocytoplasmic shuttling protein associated with active synaptoneurosomes
-
DOI 10.1016/S0014-4827(03)00222-2
-
Bardoni, B., Willemsen, R., Weiler, I.J., Schenck, A., Severijnen, L., Hindelang, C., Lalli, E., and, Mandel, J., (2003) NUFIP1 (nuclear FMRP interacting protein 1) is a nucleocytoplasmic shuttling protein associated with active synaptoneurosomes. Exp. Cell Res. 289, 95-107. (Pubitemid 37006343)
-
(2003)
Experimental Cell Research
, vol.289
, Issue.1
, pp. 95-107
-
-
Bardoni, B.1
Willemsen, R.2
Weiler, I.J.3
Schenck, A.4
Severijnen, L.-A.5
Hindelang, C.6
Lalli, E.7
Mandel, J.-L.8
-
8
-
-
0034282647
-
Fibrillarin genes encode both a conserved nucleolar protein and a novel small nucleolar RNA involved in ribosomal RNA methylation in Arabidopsis thaliana
-
Barneche, F., Steinmetz, F., and, Echeverría, M., (2000) Fibrillarin genes encode both a conserved nucleolar protein and a novel small nucleolar RNA involved in ribosomal RNA methylation in Arabidopsis thaliana. J. Biol. Chem. 275, 27212-27220.
-
(2000)
J. Biol. Chem.
, vol.275
, pp. 27212-27220
-
-
Barneche, F.1
Steinmetz, F.2
Echeverría, M.3
-
9
-
-
0035800574
-
Identification of 66 box C/D snoRNAs in Arabidopsis thaliana: Extensive gene duplications generated multiple isoforms predicting new ribosomal RNA 2′-O-methylation sites
-
DOI 10.1006/jmbi.2001.4851
-
Barneche, F., Gaspin, C., Guyot, R., and, Echeverría, M., (2001) Identification of 66 box C/D snoRNAs in Arabidopsis thaliana: extensive gene duplications generated multiple isoforms predicting new ribosomal RNA 2a′-O-methylation sites. J. Mol. Biol. 311, 57-73. (Pubitemid 32735314)
-
(2001)
Journal of Molecular Biology
, vol.311
, Issue.1
, pp. 57-73
-
-
Barneche, F.1
Gaspin, C.2
Guyot, R.3
Echeverria, M.4
-
10
-
-
39049164474
-
The Hsp90 chaperone controls the biogenesis of L7Ae RNPs through conserved machinery
-
DOI 10.1083/jcb.200708110
-
Boulon, S., Marmier-Gourrier, N., Pradet-Balade, B., et al. (2008) The Hsp90 chaperone controls the biogenesis of L7Ae RNPs through conserved machinery. J. Cell Biol. 180, 579-595. (Pubitemid 351240705)
-
(2008)
Journal of Cell Biology
, vol.180
, Issue.3
, pp. 579-595
-
-
Boulon, S.1
Marmier-Gourrier, N.2
Pradet-Balade, B.3
Wurth, L.4
Verheggen, C.5
Jady, B.E.6
Rothe, B.7
Pescia, C.8
Robert, M.-C.9
Kiss, T.10
Bardoni, B.11
Krol, A.12
Branlant, C.13
Allmang, C.14
Bertrand, E.15
Charpentier, B.16
-
11
-
-
0037264089
-
Plant snoRNAs: Functional evolution and new modes of gene expression
-
DOI 10.1016/S1360-1385(02)00007-9, PII S1360138502000079
-
Brown, J.W.S., Echeverria, M., and, Qu, L.H., (2003a) Plant snoRNAs: functional evolution and new modes of gene expression. Trends Plant Sci. 8, 42-49. (Pubitemid 36725966)
-
(2003)
Trends in Plant Science
, vol.8
, Issue.1
, pp. 42-49
-
-
Brown, J.W.S.1
Echeverria, M.2
Qu, L.-H.3
-
12
-
-
0037260415
-
Plant snoRNA database
-
DOI 10.1093/nar/gkg009
-
Brown, J.W.S., Echeverria, M., Qu, L., Lowe, T.M., Bachellerie, J., Hüttenhofer, A., Kastenmayer, J.P., Green, P.J., Shaw, P., and, Marshall, D.F., (2003b) Plant snoRNA database. Nucleic Acids Res. 31, 432-435. (Pubitemid 36157286)
-
(2003)
Nucleic Acids Research
, vol.31
, Issue.1
, pp. 432-435
-
-
Brown, J.W.S.1
Echeverria, M.2
Qu, L.-H.3
Lowe, T.M.4
Bachellerie, J.-P.5
Huttenhofer, A.6
Kastenmayer, J.P.7
Green, P.J.8
Shaw, P.9
Marshall, D.F.10
-
13
-
-
3142691271
-
BRCA1 cooperates with NUFIP and P-TEFb to activate transcription by RNA polymerase II
-
DOI 10.1038/sj.onc.1207684
-
Cabart, P., Chew, H.K., and, Murphy, S., (2004) BRCA1 cooperates with NUFIP and P-TEFb to activate transcription by RNA polymerase II. Oncogene, 23, 5316-5329. (Pubitemid 39005807)
-
(2004)
Oncogene
, vol.23
, Issue.31
, pp. 5316-5329
-
-
Cabart, P.1
Chew, H.K.2
Murphy, S.3
-
14
-
-
79952039521
-
Analyzing shoot apical meristem development
-
Carles, C., Ha, C., Jun, J., Fiume, E., and, Fletcher, J., (2010) Analyzing shoot apical meristem development. Methods Mol. Biol. 655, 105-129.
-
(2010)
Methods Mol. Biol.
, vol.655
, pp. 105-129
-
-
Carles, C.1
Ha, C.2
Jun, J.3
Fiume, E.4
Fletcher, J.5
-
15
-
-
0029806013
-
Processing of mammalian rRNA precursors at the 3' end of 18S rRNA - Identification of cis-acting signals suggests the involvement of U13 small nucleolar RNA
-
Cavaillé, J., Hadjiolov, A.A., and, Bachellerie, J.P., (1996) Processing of mammalian rRNA precursors at the 3a′ end of 18S rRNA. Identification of cis-acting signals suggests the involvement of U13 small nucleolar RNA. Eur. J. Biochem. 242, 206-213. (Pubitemid 26414222)
-
(1996)
European Journal of Biochemistry
, vol.242
, Issue.2
, pp. 206-213
-
-
Cavaille, J.1
Hadjiolov, A.A.2
Bachellerie, J.-P.3
-
16
-
-
66249110326
-
Mining small RNA sequencing data: A new approach to identify small nucleolar RNAs in Arabidopsis
-
Chen, H., and, Wu, S., (2009) Mining small RNA sequencing data: a new approach to identify small nucleolar RNAs in Arabidopsis. Nucleic Acids Res. 37, e69.
-
(2009)
Nucleic Acids Res.
, vol.37
-
-
Chen, H.1
Wu, S.2
-
17
-
-
33745590149
-
A distant coilin homologue is required for the formation of cajal bodies in Arabidopsis
-
DOI 10.1091/mbc.E05-12-1157
-
Collier, S., Pendle, A., Boudonck, K., van Rij, T., Dolan, L., and, Shaw, P., (2006) A distant coilin homologue is required for the formation of cajal bodies in Arabidopsis. Mol. Biol. Cell, 17, 2942-2951. (Pubitemid 43993499)
-
(2006)
Molecular Biology of the Cell
, vol.17
, Issue.7
, pp. 2942-2951
-
-
Collier, S.1
Pendle, A.2
Boudonck, K.3
Van Rij, T.4
Dolan, L.5
Shaw, P.6
-
18
-
-
40249094660
-
Characterization of a ribonuclease III-like protein required for cleavage of the pre-rRNA in the 3′ETS in Arabidopsis
-
DOI 10.1093/nar/gkm1130
-
Comella, P., Pontvianne, F., Lahmy, S., Vignols, F., Barbezier, N., Debures, A., Jobet, E., Brugidou, E., Echeverria, M., and, Sáez- Vásquez, J., (2008) Characterization of a ribonuclease III-like protein required for cleavage of the pre-rRNA in the 3ETS in Arabidopsis. Nucleic Acids Res. 36, 1163-1175. (Pubitemid 351330934)
-
(2008)
Nucleic Acids Research
, vol.36
, Issue.4
, pp. 1163-1175
-
-
Comella, P.1
Pontvianne, F.2
Lahmy, S.3
Vignols, F.4
Barbezier, N.5
DeBures, A.6
Jobet, E.7
Brugidou, E.8
Echeverria, M.9
Saez-Vasquez, J.10
-
19
-
-
0037013831
-
Cajal body-specific small nuclear RNAs: A novel class of 2′-O-methylation and pseudouridylation guide RNAs
-
DOI 10.1093/emboj/21.11.2746
-
Darzacq, X., Jády, B.E., Verheggen, C., Kiss, A.M., Bertrand, E., and, Kiss, T., (2002) Cajal body-specific small nuclear RNAs: a novel class of 2a′-O-methylation and pseudouridylation guide RNAs. EMBO J. 21, 2746-2756. (Pubitemid 34619390)
-
(2002)
EMBO Journal
, vol.21
, Issue.11
, pp. 2746-2756
-
-
Darzacq, X.1
Jady, B.E.2
Verheggen, C.3
Kiss, A.M.4
Bertrand, E.5
Kiss, T.6
-
20
-
-
33646076438
-
Stepwise RNP assembly at the site of H/ACA RNA transcription in human cells
-
Darzacq, X., Kittur, N., Roy, S., Shav-Tal, Y., Singer, R.H., and, Meier, U.T., (2006) Stepwise RNP assembly at the site of H/ACA RNA transcription in human cells. J. Cell Biol. 173, 207-218.
-
(2006)
J. Cell Biol.
, vol.173
, pp. 207-218
-
-
Darzacq, X.1
Kittur, N.2
Roy, S.3
Shav-Tal, Y.4
Singer, R.H.5
Meier, U.T.6
-
21
-
-
46849099372
-
Arabidopsis ribosomal proteins RPL23aA and RPL23aB are differentially targeted to the nucleolus and are disparately required for normal development
-
DOI 10.1104/pp.107.111799
-
Degenhardt, R.F., and, Bonham-Smith, P.C., (2008) Arabidopsis ribosomal proteins RPL23aA and RPL23aB are differentially targeted to the nucleolus and are desperately required for normal development. Plant Physiol. 147, 128-142. (Pubitemid 352844348)
-
(2008)
Plant Physiology
, vol.147
, Issue.1
, pp. 128-142
-
-
Degenhardt, R.F.1
Bonham-Smith, P.C.2
-
22
-
-
36049041612
-
RNA Quality Control in Eukaryotes
-
DOI 10.1016/j.cell.2007.10.041, PII S0092867407013955
-
Doma, M.K., and, Parker, R., (2007) RNA quality control in eukaryotes. Cell, 131, 660-668. (Pubitemid 350087205)
-
(2007)
Cell
, vol.131
, Issue.4
, pp. 660-668
-
-
Doma, M.K.1
Parker, R.2
-
23
-
-
67349140506
-
Structural basis for leucine-rich nuclear export signal recognition by CRM1
-
Dong, X., Biswas, A., Süel, K.E., Jackson, L.K., Martinez, R., Gu, H., and, Chook, Y.M., (2009) Structural basis for leucine-rich nuclear export signal recognition by CRM1. Nature, 458, 1136-1141.
-
(2009)
Nature
, vol.458
, pp. 1136-1141
-
-
Dong, X.1
Biswas, A.2
Süel, K.E.3
Jackson, L.K.4
Martinez, R.5
Gu, H.6
Chook, Y.M.7
-
24
-
-
9344271506
-
Modified nucleotides at the 5′ end of human U2 snRNA are required for spliceosomal E-complex formation
-
DOI 10.1261/rna.7186504
-
Dönmez, G., Hartmuth, K., and, Lührmann, R., (2004) Modified nucleotides at the 5a′ end of human U2 snRNA are required for spliceosomal E-complex formation. RNA, 10, 1925-1933. (Pubitemid 39557830)
-
(2004)
RNA
, vol.10
, Issue.12
, pp. 1925-1933
-
-
Donmez, G.1
Hartmuth, K.2
Luhrmann, R.3
-
25
-
-
19244363077
-
5'ETS rRNA processing facilitated by four small RNAs: U14, E3, U17, and U3
-
Enright, C.A., Maxwell, E.S., Eliceiri, G.L., and, Sollner-Webb, B., (1996) 5ETS rRNA processing facilitated by four small RNAs: U14, E3, U17, and U3. RNA, 2, 1094-1099. (Pubitemid 26389552)
-
(1996)
RNA
, vol.2
, Issue.11
, pp. 1094-1099
-
-
Enright, C.A.1
Stuart Maxwell, E.2
Sollner-Webb, B.3
-
26
-
-
41649115487
-
Functional importance of individual rRNA 2′-O-ribose methylations revealed by high-resolution phenotyping
-
DOI 10.1261/rna.845808
-
Esguerra, J., Warringer, J., and, Blomberg, A., (2008) Functional importance of individual rRNA 2a′-O-ribose methylations revealed by high-resolution phenotyping. RNA, 14, 649-656. (Pubitemid 351480877)
-
(2008)
RNA
, vol.14
, Issue.4
, pp. 649-656
-
-
Esguerra, J.1
Warringer, J.2
Blomberg, A.3
-
27
-
-
0026562884
-
Improved method for high efficiency transformation of intact yeast cells
-
Gietz, D., St Jean, A., Woods, R.A., and, Schiestl, R.H., (1992) Improved method for high efficiency transformation of intact yeast cells. Nucleic Acids Res. 20, 1425.
-
(1992)
Nucleic Acids Res.
, vol.20
, pp. 1425
-
-
Gietz, D.1
St Jean, A.2
Woods, R.A.3
Schiestl, R.H.4
-
28
-
-
33748169778
-
A Spliceosomal Intron Binding Protein, IBP160, Links Position-Dependent Assembly of Intron-Encoded Box C/D snoRNP to Pre-mRNA Splicing
-
DOI 10.1016/j.molcel.2006.07.011, PII S1097276506004916
-
Hirose, T., Ideue, T., Nagai, M., Hagiwara, M., Shu, M., and, Steitz, J.A., (2006) A spliceosomal intron binding protein, IBP160, links position-dependent assembly of intron-encoded box C/D snoRNP to pre-mRNA splicing. Mol. Cell, 23, 673-684. (Pubitemid 44308588)
-
(2006)
Molecular Cell
, vol.23
, Issue.5
, pp. 673-684
-
-
Hirose, T.1
Ideue, T.2
Nagai, M.3
Hagiwara, M.4
Shu, M.-D.5
Steitz, J.A.6
-
29
-
-
27644553024
-
Maintaining a conserved methylation in plant and insect U2 snRNA through compensatory mutation by nucleotide insertion
-
DOI 10.1080/15216540500306983
-
Huang, Z., Zhou, H., and, Qu, L., (2005) Maintaining a conserved methylation in plant and insect U2 snRNA through compensatory mutation by nucleotide insertion. IUBMB Life, 57, 693-699. (Pubitemid 41564307)
-
(2005)
IUBMB Life
, vol.57
, Issue.10
, pp. 693-699
-
-
Huang, Z.-P.1
Zhou, H.2
Qu, L.-H.3
-
30
-
-
0035253857
-
A small nucleolar guide RNA functions both in 2′-O-ribose methylation and pseudouridylation of the U5 spliceosomal RNA
-
DOI 10.1093/emboj/20.3.541
-
Jády, B.E., and, Kiss, T., (2001) A small nucleolar guide RNA functions both in 2a′-O-ribose methylation and pseudouridylation of the U5 spliceosomal RNA. EMBO J. 20, 541-551. (Pubitemid 32126989)
-
(2001)
EMBO Journal
, vol.20
, Issue.3
, pp. 541-551
-
-
Jady, B.E.1
Kiss, T.2
-
31
-
-
77953234404
-
Plant U13 orthologues and orphan snoRNAs identified by RNomics of RNA from Arabidopsis nucleoli
-
Kim, S.H., Spensley, M., Choi, S.K., Calixto, C.P.G., Pendle, A.F., Koroleva, O., Shaw, P.J., and, Brown, J.W.S., (2010) Plant U13 orthologues and orphan snoRNAs identified by RNomics of RNA from Arabidopsis nucleoli. Nucleic Acids Res. 38, 3054-3067.
-
(2010)
Nucleic Acids Res.
, vol.38
, pp. 3054-3067
-
-
Kim, S.H.1
Spensley, M.2
Choi, S.K.3
Calixto, C.P.G.4
Pendle, A.F.5
Koroleva, O.6
Shaw, P.J.7
Brown, J.W.S.8
-
32
-
-
0025728104
-
Alteration of the RNA polymerase specificity of U3 snRNA genes during evolution and in vitro
-
Kiss, T., Marshallsay, C., and, Filipowicz, W., (1991) Alteration of the RNA polymerase specificity of U3 snRNA genes during evolution and in vitro. Cell, 65, 517-526. (Pubitemid 121002061)
-
(1991)
Cell
, vol.65
, Issue.3
, pp. 517-526
-
-
Kiss, T.1
Marshallsay, C.2
Filipowicz, W.3
-
33
-
-
33847406229
-
Sugar-inducible expression of the nucleolin-1 gene of Arabidopsis thaliana and its role in ribosome synthesis, growth and development
-
DOI 10.1111/j.1365-313X.2006.03016.x
-
Kojima, H., Suzuki, T., Kato, T., et al. (2007) Sugar-inducible expression of the nucleolin-1 gene of Arabidopsis thaliana and its role in ribosome synthesis, growth and development. Plant J. 49, 1053-1063. (Pubitemid 46340697)
-
(2007)
Plant Journal
, vol.49
, Issue.6
, pp. 1053-1063
-
-
Kojima, H.1
Suzuki, T.2
Kato, T.3
Enomoto, K.-I.4
Sato, S.5
Kato, T.6
Tabata, S.7
Saez-Vasquez, J.8
Echeverria, M.9
Nakagawa, T.10
Ishiguro, S.11
Nakamura, K.12
-
34
-
-
0037415721
-
Plant dicistronic tRNA-snoRNA genes: A new mode of expression of the small nucleolar RNAs processed by RNase Z
-
DOI 10.1093/emboj/cdg040
-
Kruszka, K., Barneche, F., Guyot, R., Ailhas, J., Meneau, I., Schiffer, S., Marchfelder, A., and, Echeverría, M., (2003) Plant dicistronic tRNA-snoRNA genes: a new mode of expression of the small nucleolar RNAs processed by RNase Z. EMBO J. 22, 621-632. (Pubitemid 36193606)
-
(2003)
EMBO Journal
, vol.22
, Issue.3
, pp. 621-632
-
-
Kruszka, K.1
Barneche, F.2
Guyot, R.3
Ailhas, J.4
Meneau, I.5
Schiffer, S.6
Marchfelder, A.7
Echeverria, M.8
-
35
-
-
0142147328
-
The roles of endonucleolytic cleavage and exonucleolytic digestion in the 5′-end processing of S. cerevisiae box C/D snoRNAs
-
DOI 10.1261/rna.5126203
-
Lee, C.Y., Lee, A., and, Chanfreau, G., (2003) The roles of endonucleolytic cleavage and exonucleolytic digestion in the 5a′-end processing of S. cerevisiae box C/D snoRNAs. RNA, 9, 1362-1370. (Pubitemid 37310867)
-
(2003)
RNA
, vol.9
, Issue.11
, pp. 1362-1370
-
-
Lee, C.Y.1
Lee, A.2
Chanfreau, G.3
-
36
-
-
0025166298
-
Depletion of U14 small nuclear RNA (snR128) disrupts production of 18S rRNA in Saccharomyces cerevisiae
-
Li, H.D., Zagorski, J., and, Fournier, M.J., (1990) Depletion of U14 small nuclear RNA (snR128) disrupts production of 18S rRNA in Saccharomyces cerevisiae. Mol. Cell. Biol. 10, 1145-1152.
-
(1990)
Mol. Cell. Biol.
, vol.10
, pp. 1145-1152
-
-
Li, H.D.1
Zagorski, J.2
Fournier, M.J.3
-
37
-
-
0023654956
-
Improved method for the isolation of RNA from plant tissues
-
Logeman, J., Shell, J., and, Willmitzer, L., (1987) Improved method for the isolation of RNA from plant tissues. Anal. Biochem. 163, 16-20.
-
(1987)
Anal. Biochem.
, vol.163
, pp. 16-20
-
-
Logeman, J.1
Shell, J.2
Willmitzer, L.3
-
38
-
-
0036898607
-
Experimental RNomics: Identification of 140 candidates for small non-messenger RNAs in the plant Arabidopsis thaliana
-
DOI 10.1016/S0960-9822(02)01304-0, PII S0960982202013040
-
Marker, C., Zemann, A., Terhörst, T., Kiefmann, M., Kastenmayer, J.P., Green, P., Bachellerie, J., Brosius, J., and, Hüttenhofer, A., (2002) Experimental RNomics: identification of 140 candidates for small non-messenger RNAs in the plant Arabidopsis thaliana. Curr. Biol. 12, 2002-2013. (Pubitemid 35450923)
-
(2002)
Current Biology
, vol.12
, Issue.23
, pp. 2002-2013
-
-
Marker, C.1
Zemann, A.2
Terhorst, T.3
Kiefmann, M.4
Kastenmayer, J.P.5
Green, P.6
Bachellerie, J.-P.7
Brosius, J.8
Huttenhofer, A.9
-
39
-
-
0002425959
-
Posttranscriptional modifications in the U small nuclear RNAs
-
(Grosjean, H. and Benne, R., eds). Washington DC: ASM Press
-
Massenet, S., Mougin, A., and, Branlant, C., (1998) Posttranscriptional modifications in the U small nuclear RNAs. In Modification and Editing of RNA (, Grosjean, H., and, Benne, R., eds). Washington DC: ASM Press, pp. 201-228.
-
(1998)
Modification and Editing of RNA
, pp. 201-228
-
-
Massenet, S.1
Mougin, A.2
Branlant, C.3
-
40
-
-
33847187076
-
Non-coding RNAs: Lessons from the small nuclear and small nucleolar RNAs
-
Matera, A.G., Terns, R.M., and, Terns, M.P., (2007) Non-coding RNAs: lessons from the small nuclear and small nucleolar RNAs. Nat. Rev. Mol. Cell Biol. 8, 209-220.
-
(2007)
Nat. Rev. Mol. Cell Biol.
, vol.8
, pp. 209-220
-
-
Matera, A.G.1
Terns, R.M.2
Terns, M.P.3
-
41
-
-
0029026640
-
The small nucleolar RNAs
-
Maxwell, E.S., and, Fournier, M.J., (1995) The small nucleolar RNAs. Annu. Rev. Biochem. 64, 897-934.
-
(1995)
Annu. Rev. Biochem.
, vol.64
, pp. 897-934
-
-
Maxwell, E.S.1
Fournier, M.J.2
-
42
-
-
34748904017
-
A dynamic scaffold of pre-snoRNP factors facilitates human box C/D snoRNP assembly
-
DOI 10.1128/MCB.01097-07
-
McKeegan, K.S., Debieux, C.M., Boulon, S., Bertrand, E., and, Watkins, N.J., (2007) A dynamic scaffold of pre-snoRNP factors facilitates human box C/D snoRNP assembly. Mol. Cell. Biol. 27, 6782-6793. (Pubitemid 47483629)
-
(2007)
Molecular and Cellular Biology
, vol.27
, Issue.19
, pp. 6782-6793
-
-
McKeegan, K.S.1
Debieux, C.M.2
Boulon, S.3
Bertrand, E.4
Watkins, N.J.5
-
43
-
-
70249098848
-
Evidence that the AAA+ proteins TIP48 and TIP49 bridge interactions between 15.5K and the related NOP56 and NOP58 proteins during box C/D snoRNP biogenesis
-
McKeegan, K.S., Debieux, C.M., and, Watkins, N.J., (2009) Evidence that the AAA+ proteins TIP48 and TIP49 bridge interactions between 15.5K and the related NOP56 and NOP58 proteins during box C/D snoRNP biogenesis. Mol. Cell. Biol. 29, 4971-4981.
-
(2009)
Mol. Cell. Biol.
, vol.29
, pp. 4971-4981
-
-
McKeegan, K.S.1
Debieux, C.M.2
Watkins, N.J.3
-
44
-
-
0032874290
-
Role of the box C/D motif in localization of small nucleolar RNAs to coiled bodies and nucleoli
-
Narayanan, A., Speckmann, W., Terns, R., and, Terns, M.P., (1999) Role of the box C/D motif in localization of small nucleolar RNAs to coiled bodies and nucleoli. Mol. Biol. Cell, 10, 2131-2147. (Pubitemid 29343124)
-
(1999)
Molecular Biology of the Cell
, vol.10
, Issue.7
, pp. 2131-2147
-
-
Narayanan, A.1
Speckmann, W.2
Terns, R.3
Terns, M.P.4
-
45
-
-
44349194970
-
Identification of genes that function in the biogenesis and localization of small nucleolar RNAs in Saccharomyces cerevisiae
-
DOI 10.1128/MCB.01115-07
-
Qiu, H., Eifert, J., Wacheul, L., et al. (2008) Identification of genes that function in the biogenesis and localization of small nucleolar RNAs in Saccharomyces cerevisiae. Mol. Cell. Biol. 28, 3686-3699. (Pubitemid 351732905)
-
(2008)
Molecular and Cellular Biology
, vol.28
, Issue.11
, pp. 3686-3699
-
-
Qiu, H.1
Eifert, J.2
Wacheul, L.3
Thiry, M.4
Berger, A.C.5
Jakovljevic, J.6
Woolford Jr., J.L.7
Corbett, A.H.8
Lafontaine, D.L.J.9
Terns, R.M.10
Terns, M.P.11
-
46
-
-
77953270602
-
Nucleolar RNPs: From genes to functional snoRNAs in plants
-
Rodor, J., Letelier, I., Holuigue, L., and, Echeverria, M., (2010) Nucleolar RNPs: from genes to functional snoRNAs in plants. Biochem. Soc. Trans. 38, 672-676.
-
(2010)
Biochem. Soc. Trans.
, vol.38
, pp. 672-676
-
-
Rodor, J.1
Letelier, I.2
Holuigue, L.3
Echeverria, M.4
-
47
-
-
0031668937
-
Localization and processing from a polycistronic precursor of novel snoRNAs in maize
-
Shaw, P.J., Beven, A.F., Leader, D.J., and, Brown, J.W., (1998) Localization and processing from a polycistronic precursor of novel snoRNAs in maize. J. Cell Sci. 111, 2121-2128. (Pubitemid 28403517)
-
(1998)
Journal of Cell Science
, vol.111
, Issue.15
, pp. 2121-2128
-
-
Shaw, P.J.1
Beven, A.F.2
Leader, D.J.3
Brown, J.W.S.4
-
48
-
-
9244225692
-
Guide RNAs with 5′ caps and novel box C/D snoRNA-like domains for modification of snRNAs in Metazoa
-
DOI 10.1016/j.cub.2004.11.003, PII S0960982204008723
-
Tycowski, K.T., Aab, A., and, Steitz, J.A., (2004) Guide RNAs with 5a′caps and novel box C/D snoRNA-like domains for modification of snRNAs in metazoan. Curr. Biol. 23, 1985-1995. (Pubitemid 39547953)
-
(2004)
Current Biology
, vol.14
, Issue.22
, pp. 1985-1995
-
-
Tycowski, K.T.1
Aab, A.2
Steitz, J.A.3
-
49
-
-
0033981301
-
Yeast exosome mutants accumulate 3'-extended polyadenylated forms of U4 small nuclear RNA and small nucleolar RNAs
-
DOI 10.1128/MCB.20.2.441-452.2000
-
Van Hoof, A., Lennertz, P., and, Parker, R., (2000) Yeast exosome mutants accumulate 3-extended polyadenylated forms of U4 small nuclear RNA and small nucleolar RNAs. Mol. Cell. Biol. 20, 441-452. (Pubitemid 30023085)
-
(2000)
Molecular and Cellular Biology
, vol.20
, Issue.2
, pp. 441-452
-
-
Van Hoof, A.1
Lennertz, P.2
Parker, R.3
-
50
-
-
0028342633
-
An S18 ribosomal protein gene copy at the Arabidopsis PFL locus affects plant development by its specific expression in meristems
-
Van Lijsebettens, M., Vanderhaeghen, R., De Block, M., Bauw, G., Villarroel, R., and, Van Montagu, M., (1994) An S18 ribosomal protein gene copy at the Arabidopsis PFL locus affects plant development by its specific expression in meristems. EMBO J. 13, 3378-3388. (Pubitemid 24226953)
-
(1994)
EMBO Journal
, vol.13
, Issue.14
, pp. 3378-3388
-
-
Van Lijsebettens, M.1
Vanderhaeghen, R.2
De Block, M.3
Bauw, G.4
Villarroel, R.5
Van Montagu, M.6
-
51
-
-
0037013939
-
Mammalian and yeast U3 snoRNPs are matured in specific and related nuclear compartments
-
DOI 10.1093/emboj/21.11.2736
-
Verheggen, C., Lafontaine, D.L.J., Samarsky, D., Mouaikel, J., Blanchard, J., Bordonné, R., and, Bertrand, E., (2002) Mammalian and yeast U3 snoRNPs are matured in specific and related nuclear compartments. EMBO J. 21, 2736-2745. (Pubitemid 34619389)
-
(2002)
EMBO Journal
, vol.21
, Issue.11
, pp. 2736-2745
-
-
Verheggen, C.1
Lafontaine, D.L.J.2
Samarsky, D.3
Mouaikel, J.4
Blanchard, J.-M.5
Bordonne, R.6
Bertrand, E.7
-
52
-
-
0000004941
-
Agrobacterium-mediated gene transfer to plant cells: Cointegrate and binary vector systems
-
Walkerpeach, C., and, Velten, J., (1994) Agrobacterium-mediated gene transfer to plant cells: cointegrate and binary vector systems. Plant Mol. Biol. Man. 1, 1-19.
-
(1994)
Plant Mol. Biol. Man.
, vol.1
, pp. 1-19
-
-
Walkerpeach, C.1
Velten, J.2
-
53
-
-
0034721649
-
A common core RNP structure shared between the small nucleoar box C/D RNPs and the spliceosomal U4 snRNP
-
Watkins, N.J., Ségault, V., Charpentier, B., Nottrott, S., Fabrizio, P., Bachi, A., Wilm, M., Rosbash, M., Branlant, C., and, Lührmann, R., (2000) A common core RNP structure shared between the small nucleoar box C/D RNPs and the spliceosomal U4 snRNP. Cell, 103, 457-466.
-
(2000)
Cell
, vol.103
, pp. 457-466
-
-
Watkins, N.J.1
Ségault, V.2
Charpentier, B.3
Nottrott, S.4
Fabrizio, P.5
Bachi, A.6
Wilm, M.7
Rosbash, M.8
Branlant, C.9
Lührmann, R.10
-
54
-
-
0035173004
-
An Arabidopsis minute-like phenotype caused by a semi-dominant mutation in a RIBOSOMAL PROTEIN S5 gene
-
Weijers, D., Franke-van Dijk, M., Vencken, R.J., Quint, A., Hooykaas, P., and, Offringa, R., (2001) An Arabidopsis minute-like phenotype caused by a semi-dominant mutation in a RIBOSOMAL PROTEIN S5 gene. Development, 128, 4289-4299. (Pubitemid 33077039)
-
(2001)
Development
, vol.128
, Issue.21
, pp. 4289-4299
-
-
Weijers, D.1
Franke-van Dijk, M.2
Vencken, R.-J.3
Quint, A.4
Hooykaas, P.5
Offringa, R.6
-
55
-
-
0032189145
-
Modifications of U2 snRNA are required for snRNP assembly and pre-mRNA splicing
-
DOI 10.1093/emboj/17.19.5783
-
Yu, Y.T., Shu, M.D., and, Steitz, J.A., (1998) Modifications of U2 snRNA are required for snRNP assembly and pre-mRNA splicing. EMBO J. 17, 5783-5795. (Pubitemid 28445989)
-
(1998)
EMBO Journal
, vol.17
, Issue.19
, pp. 5783-5795
-
-
Yu, Y.-T.1
Shu, M.-D.2
Steitz, J.A.3
-
56
-
-
77955291503
-
Arabidopsis thaliana XRN2 is required for primary cleavage in the pre-ribosomal RNA
-
Zakrzewska-Placzek, M., Souret, F.F., Sobczyk, G.J., Green, P.J., and, Kufel, J., (2010) Arabidopsis thaliana XRN2 is required for primary cleavage in the pre-ribosomal RNA. Nucleic Acids Res. 38, 4487-4502.
-
(2010)
Nucleic Acids Res.
, vol.38
, pp. 4487-4502
-
-
Zakrzewska-Placzek, M.1
Souret, F.F.2
Sobczyk, G.J.3
Green, P.J.4
Kufel, J.5
-
57
-
-
1642447085
-
Pseudouridines in and near the branch site recognition region of U2 snRNA are required for snRNP biogenesis and pre-mRNA splicing in Xenopus oocytes
-
DOI 10.1261/rna.5159504
-
Zhao, X., and, Yu, Y., (2004) Pseudouridines in and near the branch site recognition region of U2 snRNA are required for snRNP biogenesis and pre-mRNA splicing in Xenopus oocytes. RNA, 10, 681-690. (Pubitemid 38405946)
-
(2004)
RNA
, vol.10
, Issue.4
, pp. 681-690
-
-
Zhao, X.1
Yu, Y.-T.2
|