메뉴 건너뛰기




Volumn 150, Issue 3, 2009, Pages 1598-1610

Processing of a dicistronic tRNA-snoRNA precursor: Combined analysis in vitro and in vivo reveals alternate pathways and coupling to assembly of snoRNP

Author keywords

[No Author keywords available]

Indexed keywords

ARABIDOPSIS; ARABIDOPSIS THALIANA; BRASSICA OLERACEA; BRASSICA OLERACEA VAR. BOTRYTIS; BRASSICA OLERACEA VAR. CAPITATA; EUKARYOTA;

EID: 67650100790     PISSN: 00320889     EISSN: 15322548     Source Type: Journal    
DOI: 10.1104/pp.109.137968     Document Type: Article
Times cited : (25)

References (41)
  • 3
    • 0031040698 scopus 로고    scopus 로고
    • Partial purification and characterization of nuclear ribonuclease P from wheat
    • Arends S, Schon A (1997) Partial purification and characterization of nuclear ribonuclease P from wheat. Eur J Biochem 244: 635-645
    • (1997) Eur J Biochem , vol.244 , pp. 635-645
    • Arends, S.1    Schon, A.2
  • 4
    • 0035800574 scopus 로고    scopus 로고
    • Identification of 66 box C/D snoRNAs in Arabidopsis thaliana: Extensive gene duplications generated multiple isoforms predicting new ribosomal RNA 2'-O-methylation sites
    • Barneche F, Gaspin C, Guyot R, Echeverría M (2001) Identification of 66 box C/D snoRNAs in Arabidopsis thaliana: Extensive gene duplications generated multiple isoforms predicting new ribosomal RNA 2'-O-methylation sites. J Mol Biol 311: 57-73
    • (2001) J Mol Biol , vol.311 , pp. 57-73
    • Barneche, F.1    Gaspin, C.2    Guyot, R.3    Echeverría, M.4
  • 5
    • 0034282647 scopus 로고    scopus 로고
    • Fibrillarin genes encode both a conserved nucleolar protein and a novel small nucleolar RNA involved in ribosomal RNA methylation in Arabidopsis thaliana
    • Barneche F, Steinmetz F, Echeverría M (2000) Fibrillarin genes encode both a conserved nucleolar protein and a novel small nucleolar RNA involved in ribosomal RNA methylation in Arabidopsis thaliana. J Biol Chem 275: 27212-27220
    • (2000) J Biol Chem , vol.275 , pp. 27212-27220
    • Barneche, F.1    Steinmetz, F.2    Echeverría, M.3
  • 6
    • 0031624102 scopus 로고    scopus 로고
    • In planta Agrobacterium-mediated transformation of adult Arabidopsis thaliana plants by vacuum infiltration
    • Bechtold N, Pelletier G (1998) In planta Agrobacterium-mediated transformation of adult Arabidopsis thaliana plants by vacuum infiltration. Methods Mol Biol 82: 259-266
    • (1998) Methods Mol Biol , vol.82 , pp. 259-266
    • Bechtold, N.1    Pelletier, G.2
  • 8
    • 0037264089 scopus 로고    scopus 로고
    • Plant snoRNAs: Functional evolution and new modes of gene expression
    • Brown JW, Echeverría M, Qu LH (2003) Plant snoRNAs: functional evolution and new modes of gene expression. Trends Plant Sci 8: 42-49
    • (2003) Trends Plant Sci , vol.8 , pp. 42-49
    • Brown, J.W.1    Echeverría, M.2    Qu, L.H.3
  • 9
    • 0029919357 scopus 로고    scopus 로고
    • Processing of the intron-encoded U16 and U18 snoRNAs: The conserved C and D boxes control both the processing reaction and the stability of the mature snoRNA
    • Caffarelli E, Fatica A, Prislei S, De Gregorio E, Fragapane P, Bozzoni I (1996) Processing of the intron-encoded U16 and U18 snoRNAs: The conserved C and D boxes control both the processing reaction and the stability of the mature snoRNA. EMBO J 15: 1121-1131
    • (1996) EMBO J , vol.15 , pp. 1121-1131
    • Caffarelli, E.1    Fatica, A.2    Prislei, S.3    de Gregorio, E.4    Fragapane, P.5    Bozzoni, I.6
  • 12
    • 44149119097 scopus 로고    scopus 로고
    • Degradation of several hypomodified mature tRNA species in Saccharomyces cerevisiae is mediated by Met22 and the 5'-3' exonucleases Rat1 and Xrn1
    • Chernyakov I, Whipple JM, Kotelawala L, Grayhack EJ, Phizicky EM (2008) Degradation of several hypomodified mature tRNA species in Saccharomyces cerevisiae is mediated by Met22 and the 5'-3' exonucleases Rat1 and Xrn1. Genes Dev 22: 1369-1380
    • (2008) Genes Dev , vol.22 , pp. 1369-1380
    • Chernyakov, I.1    Whipple, J.M.2    Kotelawala, L.3    Grayhack, E.J.4    Phizicky, E.M.5
  • 14
    • 44149101017 scopus 로고    scopus 로고
    • Competition between the Rex1 exonuclease and the La protein affects both Trf4p-mediated RNA quality control and pre-tRNA maturation
    • Copela LA, Fernandez CF, Sherrer RL, Wolin SL (2008) Competition between the Rex1 exonuclease and the La protein affects both Trf4p-mediated RNA quality control and pre-tRNA maturation. RNA 14: 1214-1227
    • (2008) RNA , vol.14 , pp. 1214-1227
    • Copela, L.A.1    Fernandez, C.F.2    Sherrer, R.L.3    Wolin, S.L.4
  • 15
    • 50449087360 scopus 로고    scopus 로고
    • Genome-wide search for yeast RNase P substrates reveals role in maturation of intron-encoded box C/D small nucleolar RNAs
    • Coughlin DJ, Pleiss JA, Walker SC, Whitworth GB, Engelke DR (2008) Genome-wide search for yeast RNase P substrates reveals role in maturation of intron-encoded box C/D small nucleolar RNAs. Proc Natl Acad Sci USA 105: 12218-12223
    • (2008) Proc Natl Acad Sci USA , vol.105 , pp. 12218-12223
    • Coughlin, D.J.1    Pleiss, J.A.2    Walker, S.C.3    Whitworth, G.B.4    Engelke, D.R.5
  • 16
    • 0036591884 scopus 로고    scopus 로고
    • Biogenesis of small nucleolar ribonucleo-proteins
    • Filipowicz W, Pogacic V (2002) Biogenesis of small nucleolar ribonucleo-proteins. Curr Opin Cell Biol 14: 319-327
    • (2002) Curr Opin Cell Biol , vol.14 , pp. 319-327
    • Filipowicz, W.1    Pogacic, V.2
  • 18
    • 0029278892 scopus 로고
    • Characterization and partial purification of two pre-tRNA 5'-processing activities from Daucus carrota (carrot) suspension cells
    • Franklin SE, Zwick MG, Johnson JD (1995) Characterization and partial purification of two pre-tRNA 5'-processing activities from Daucus carrota (carrot) suspension cells. Plant J 7: 553-563
    • (1995) Plant J , vol.7 , pp. 553-563
    • Franklin, S.E.1    Zwick, M.G.2    Johnson, J.D.3
  • 19
    • 0035803562 scopus 로고    scopus 로고
    • Release of U18 snoRNA from its host intron requires interaction of Nop1p with the Rnt1p endonuclease
    • Giorgi C, Fatica A, Nagel R, Bozzoni I (2001) Release of U18 snoRNA from its host intron requires interaction of Nop1p with the Rnt1p endonuclease. EMBO J 20: 6856-6865
    • (2001) EMBO J , vol.20 , pp. 6856-6865
    • Giorgi, C.1    Fatica, A.2    Nagel, R.3    Bozzoni, I.4
  • 20
    • 33748169778 scopus 로고    scopus 로고
    • A spliceosomal intron binding protein, IBP160, links position-dependent assembly of intron-encoded box C/D snoRNP to pre-mRNA splicing
    • Hirose T, Ideue T, Nagai M, Hagiwara M, Shu MD, Steitz JA (2006) A spliceosomal intron binding protein, IBP160, links position-dependent assembly of intron-encoded box C/D snoRNP to pre-mRNA splicing. Mol Cell 23: 673-684
    • (2006) Mol Cell , vol.23 , pp. 673-684
    • Hirose, T.1    Ideue, T.2    Nagai, M.3    Hagiwara, M.4    Shu, M.D.5    Steitz, J.A.6
  • 21
    • 2642574393 scopus 로고    scopus 로고
    • Nuclear surveillance and degradation of hypomodified initiator tRNAMet in S. cerevisiae
    • Kadaba S, Krueger A, Trice T, Krecic AM, Hinnebusch AG, Anderson J (2004) Nuclear surveillance and degradation of hypomodified initiator tRNAMet in S. cerevisiae. Genes Dev 18: 1227-1240
    • (2004) Genes Dev , vol.18 , pp. 1227-1240
    • Kadaba, S.1    Krueger, A.2    Trice, T.3    Krecic, A.M.4    Hinnebusch, A.G.5    Anderson, J.6
  • 22
    • 12344275917 scopus 로고    scopus 로고
    • Biogenesis of small nuclear RNPs
    • Kiss T (2004) Biogenesis of small nuclear RNPs. J Cell Sci 117: 5949-5951
    • (2004) J Cell Sci , vol.117 , pp. 5949-5951
    • Kiss, T.1
  • 23
    • 0029068460 scopus 로고
    • Exonucleolytic processing of small nucleolar RNAs from pre-mRNA introns
    • Kiss T, Filipowicz W (1995) Exonucleolytic processing of small nucleolar RNAs from pre-mRNA introns. Genes Dev 9: 1411-1424
    • (1995) Genes Dev , vol.9 , pp. 1411-1424
    • Kiss, T.1    Filipowicz, W.2
  • 25
    • 0033912221 scopus 로고    scopus 로고
    • Precursors to the U3 small nucleolar RNA lack small nucleolar RNP proteins but are stabilized by La binding
    • Kufel J, Allmang C, Chanfreau G, Petfalski E, Lafontaine DL, Tollervey D (2000) Precursors to the U3 small nucleolar RNA lack small nucleolar RNP proteins but are stabilized by La binding. Mol Cell Biol 20: 5415-5424
    • (2000) Mol Cell Biol , vol.20 , pp. 5415-5424
    • Kufel, J.1    Allmang, C.2    Chanfreau, G.3    Petfalski, E.4    Lafontaine, D.L.5    Tollervey, D.6
  • 26
    • 33847187076 scopus 로고    scopus 로고
    • Non-coding RNAs: Lessons from the small nuclear and small nucleolar RNAs
    • Matera AG, Terns RM, Terns MP (2007) Non-coding RNAs: lessons from the small nuclear and small nucleolar RNAs. Nat Rev Mol Cell Biol 8: 209-220
    • (2007) Nat Rev Mol Cell Biol , vol.8 , pp. 209-220
    • Matera, A.G.1    Terns, R.M.2    Terns, M.P.3
  • 27
    • 0026059582 scopus 로고
    • In vivo pre-tRNA processing in Saccharomyces cerevisiae
    • O'Connor JP, Peebles CL (1991) In vivo pre-tRNA processing in Saccharomyces cerevisiae. Mol Cell Biol 11: 425-439
    • (1991) Mol Cell Biol , vol.11 , pp. 425-439
    • O'Connor, J.P.1    Peebles, C.L.2
  • 28
    • 0031935899 scopus 로고    scopus 로고
    • Processing of the precursors to small nucleolar RNAs and rRNAs requires common components
    • Petfalski E, Dandekar T, Henry Y, Tollervey D (1998) Processing of the precursors to small nucleolar RNAs and rRNAs requires common components. Mol Cell Biol 18: 1181-1189
    • (1998) Mol Cell Biol , vol.18 , pp. 1181-1189
    • Petfalski, E.1    Dandekar, T.2    Henry, Y.3    Tollervey, D.4
  • 29
    • 33745123379 scopus 로고    scopus 로고
    • A role for the catalytic ribonucleoprotein RNase P in RNA polymerase III transcription
    • Reiner R, Ben-Asouli Y, Krilovetzky I, Jarrous N (2006) A role for the catalytic ribonucleoprotein RNase P in RNA polymerase III transcription. Genes Dev 20: 1621-1635
    • (2006) Genes Dev , vol.20 , pp. 1621-1635
    • Reiner, R.1    Ben-Asouli, Y.2    Krilovetzky, I.3    Jarrous, N.4
  • 30
    • 0030694715 scopus 로고    scopus 로고
    • Extensive purification of a putative RNA polymerase I holoenzyme from plants that accurately initiates rRNA gene transcription in vitro
    • Saez-Vasquez J, Pikaard CS (1997) Extensive purification of a putative RNA polymerase I holoenzyme from plants that accurately initiates rRNA gene transcription in vitro. Proc Natl Acad Sci USA 94: 11869-11874
    • (1997) Proc Natl Acad Sci USA , vol.94 , pp. 11869-11874
    • Saez-Vasquez, J.1    Pikaard, C.S.2
  • 31
    • 0032125707 scopus 로고    scopus 로고
    • The snoRNA box C/D motif directs nucleolar targeting and also couples snoRNA synthesis and localization
    • Samarsky DA, Fournier MJ, Singer RH, Bertrand E (1998) The snoRNA box C/D motif directs nucleolar targeting and also couples snoRNA synthesis and localization. EMBO J 17: 3747-3757
    • (1998) EMBO J , vol.17 , pp. 3747-3757
    • Samarsky, D.A.1    Fournier, M.J.2    Singer, R.H.3    Bertrand, E.4
  • 33
    • 0037013852 scopus 로고    scopus 로고
    • Assigning a function to a conserved group of proteins: The tRNA 3'-processing enzymes
    • Schiffer S, Rosch S, Marchfelder A (2002) Assigning a function to a conserved group of proteins: the tRNA 3'-processing enzymes. EMBO J 21: 2769-2777
    • (2002) EMBO J , vol.21 , pp. 2769-2777
    • Schiffer, S.1    Rosch, S.2    Marchfelder, A.3
  • 34
    • 0031668937 scopus 로고    scopus 로고
    • Localisation and processing from polycistronic precursor of novel snoRNAs in maize
    • Shaw PJ, Beven AF, Leader DJ, Brown JW (1998) Localisation and processing from polycistronic precursor of novel snoRNAs in maize. J Cell Sci 111: 2121-2128
    • (1998) J Cell Sci , vol.111 , pp. 2121-2128
    • Shaw, P.J.1    Beven, A.F.2    Leader, D.J.3    Brown, J.W.4
  • 38
    • 0033959894 scopus 로고    scopus 로고
    • Identification of a novel element required for processing of intron-encoded box C/D small nucleolar RNAs in Saccharomyces cerevisiae
    • Villa T, Ceradini F, Bozzoni I (2000) Identification of a novel element required for processing of intron-encoded box C/D small nucleolar RNAs in Saccharomyces cerevisiae. Mol Cell Biol 20: 1311-1320
    • (2000) Mol Cell Biol , vol.20 , pp. 1311-1320
    • Villa, T.1    Ceradini, F.2    Bozzoni, I.3
  • 39
    • 0036889385 scopus 로고    scopus 로고
    • Conserved stem II of the box C/D motif is essential for nucleolar localization and is required, along with the 15.5K protein, for the hierarchical assembly of the box C/D snoRNP
    • Watkins NJ, Dickmanns A, Luhrmann R (2002) Conserved stem II of the box C/D motif is essential for nucleolar localization and is required, along with the 15.5K protein, for the hierarchical assembly of the box C/D snoRNP. Mol Cell Biol 22: 8342-8352
    • (2002) Mol Cell Biol , vol.22 , pp. 8342-8352
    • Watkins, N.J.1    Dickmanns, A.2    Luhrmann, R.3
  • 40
    • 0032935863 scopus 로고    scopus 로고
    • The trials and travels of tRNA
    • Wolin SL, Matera AG (1999) The trials and travels of tRNA. Genes Dev 13: 1-10
    • (1999) Genes Dev , vol.13 , pp. 1-10
    • Wolin, S.L.1    Matera, A.G.2
  • 41
    • 0034086571 scopus 로고    scopus 로고
    • The TATA motif, the CAA motif and the poly(T) transcription termination motif are all important for transcription reinitiation on plant tRNA genes
    • Yukawa Y, Sugita M, Choisne N, Small I, Sugiura M (2000) The TATA motif, the CAA motif and the poly(T) transcription termination motif are all important for transcription re-initiation on plant tRNA genes. Plant J 22: 439-447
    • (2000) Plant J , vol.22 , pp. 439-447
    • Yukawa, Y.1    Sugita, M.2    Choisne, N.3    Small, I.4    Sugiura, M.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.